RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 C10orf128Q5T292 105 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 ARMC4Q5T2S8 1044 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 REEP3Q6NUK4 255 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 TMEM53Q6P2H8 277 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 BLOC1S3Q6QNY0 202 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 RETREG3Q86VR2 466 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 LRRC28Q86X40 367 aaPredicted RBP8.06□□□□□ -1.12
MCF2L-223ENST00000473345 TEX29Q8N6K0 151 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 POU5F2Q8N7G0 328 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 ZNF283Q8N7M2 679 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 NOXO1Q8NFA2 376 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 PFN4Q8NHR9 129 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 CMTM5Q96DZ9 223 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 TIMD4Q96H15 378 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 EPYCQ99645 322 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 CPPED1Q9BRF8 314 aaPredicted RBP8.06□□□□□ -1.12
MCF2L-223ENST00000473345 TMEM27Q9HBJ8 222 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 C20orf141Q9NUB4 165 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 TMEM106BQ9NUM4 274 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 FBXL3Q9UKT7 428 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 NOTCH1P46531 2555 aa8.06□□□□□ -1.12
MCF2L-223ENST00000473345 SLC22A23A1A5C7 686 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 C5orf49A4QMS7 147 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 FAM181BA6NEQ2 426 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 POM121CA8CG34 1229 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 CEACAM18A8MTB9 384 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 C5orf58C9J3I9 102 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 CHP2O43745 196 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 TSPAN15O95858 294 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 MT-ND5P03915 603 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 TSPAN19P0C672 248 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 SELEP16581 610 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 GPX2P18283 190 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 TNFRSF1BP20333 461 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 GCH1P30793 250 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 PCGF2P35227 344 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 AQP2P41181 271 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 MNAT1P51948 309 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 STX1BP61266 288 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 PPP1CBP62140 327 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 CDK5R2Q13319 367 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 ENDOGQ14249 297 aaKnown RBP8.05□□□□□ -1.12
MCF2L-223ENST00000473345 SLC36A2Q495M3 483 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 FAM201AQ5SY85 155 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 RUSC1-AS1Q66K80 236 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 ASPHD2Q6ICH7 369 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 SLC25A47Q6Q0C1 308 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 DLEU7Q6UYE1 221 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 BRD3OSQ6XYD6 125 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 C9orf139Q6ZV77 190 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 SPATC1Q76KD6 591 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 PARP8Q8N3A8 854 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 VANGL1Q8TAA9 524 aaPredicted RBP8.05□□□□□ -1.12
MCF2L-223ENST00000473345 ABHD4Q8TB40 342 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 ADAMTS16Q8TE57 1224 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 ITLN1Q8WWA0 313 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 NSMAFQ92636 917 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 PKP2Q99959 881 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 CITED1Q99966 193 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 LRMDAQ9H2I8 198 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 RAD21L1Q9H4I0 556 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 TMEM38AQ9H6F2 299 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 RMND5AQ9H871 391 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 TNFRSF19Q9NS68 423 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 TAS2R1Q9NYW7 299 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 C1RLQ9NZP8 487 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 CCDC167Q9P0B6 97 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 SLC7A7Q9UM01 511 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 MMP24Q9Y5R2 645 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 GMEB1Q9Y692 573 aa8.05□□□□□ -1.12
MCF2L-223ENST00000473345 TRAV40A0A0B4J280 105 aa8.04□□□□□ -1.12
MCF2L-223ENST00000473345 IGHV3-64DA0A0J9YX35 117 aa8.04□□□□□ -1.12
MCF2L-223ENST00000473345 LOC100653049A0A140TA62 436 aa8.04□□□□□ -1.12
MCF2L-223ENST00000473345 IQCMA0A1B0GVH7 501 aa8.04□□□□□ -1.12
MCF2L-223ENST00000473345 BLOC1S5-TXNDC5H3BN57 136 aa8.04□□□□□ -1.12
MCF2L-223ENST00000473345 FBP2O00757 339 aa8.04□□□□□ -1.12
MCF2L-223ENST00000473345 PIP5K1CO60331 668 aa8.04□□□□□ -1.12
MCF2L-223ENST00000473345 ICMTO60725 284 aa8.04□□□□□ -1.12
MCF2L-223ENST00000473345 ENTPD5O75356 428 aa8.04□□□□□ -1.12
MCF2L-223ENST00000473345 FCN3O75636 299 aa8.04□□□□□ -1.12
MCF2L-223ENST00000473345 DNAJC8O75937 253 aaPredicted RBP8.04□□□□□ -1.12
MCF2L-223ENST00000473345 KRT34O76011 436 aa8.04□□□□□ -1.12
MCF2L-223ENST00000473345 WNT2P09544 360 aa8.04□□□□□ -1.12
MCF2L-223ENST00000473345 ACADSP16219 412 aa8.04□□□□□ -1.12
MCF2L-223ENST00000473345 LAP3P28838 519 aa8.04□□□□□ -1.12
MCF2L-223ENST00000473345 APLNRP35414 380 aa8.04□□□□□ -1.12
MCF2L-223ENST00000473345 PMELP40967 661 aa8.04□□□□□ -1.12
MCF2L-223ENST00000473345 RASSF2P50749 326 aa8.04□□□□□ -1.12
MCF2L-223ENST00000473345 SELENOVP59797 346 aa8.04□□□□□ -1.12
MCF2L-223ENST00000473345 MRPS34P82930 218 aaKnown RBP8.04□□□□□ -1.12
MCF2L-223ENST00000473345 TNFAIP6P98066 277 aaPredicted RBP8.04□□□□□ -1.12
MCF2L-223ENST00000473345 HSF2Q03933 536 aa8.04□□□□□ -1.12
MCF2L-223ENST00000473345 FHL1Q13642 323 aa8.04□□□□□ -1.12
MCF2L-223ENST00000473345 CYLC2Q14093 348 aaPredicted RBP8.04□□□□□ -1.12
MCF2L-223ENST00000473345 LAPTM4AQ15012 233 aa8.04□□□□□ -1.12
MCF2L-223ENST00000473345 MAPRE2Q15555 327 aa8.04□□□□□ -1.12
MCF2L-223ENST00000473345 ZNF718Q3SXZ3 478 aa8.04□□□□□ -1.12
MCF2L-223ENST00000473345 AGKQ53H12 422 aa8.04□□□□□ -1.12
MCF2L-223ENST00000473345 COQ5Q5HYK3 327 aa8.04□□□□□ -1.12
MCF2L-223ENST00000473345 SWT1Q5T5J6 900 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms