RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 ATAD3AQ9NVI7 634 aa4.78□□□□□ -1.64
SIK3-208ENST00000472648 TMEM38BQ9NVV0 291 aa4.78□□□□□ -1.64
SIK3-208ENST00000472648 NKIRAS1Q9NYS0 192 aa4.78□□□□□ -1.64
SIK3-208ENST00000472648 ERVK-18Q9QC07 812 aa4.78□□□□□ -1.64
SIK3-208ENST00000472648 LSM4Q9Y4Z0 139 aaKnown RBP4.78□□□□□ -1.64
SIK3-208ENST00000472648 A0A1W2PPM1 405 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 SLC28A1O00337 649 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 DYNC1I1O14576 645 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 OR2T1O43869 369 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 SPAG7O75391 227 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 SERPINI2O75830 405 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 FSTL3O95633 263 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 LHBP01229 141 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 QDPRP09417 244 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 GKN3PP0CG01 181 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 MYL2P10916 166 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 LAMP1P11279 417 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 HLA-DOBP13765 273 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 H2AFXP16104 143 aaPredicted RBP4.77□□□□□ -1.65
SIK3-208ENST00000472648 IL7RP16871 459 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 IMPDH1P20839 514 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 GSTM3P21266 225 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 CBLP22681 906 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 AHCYP23526 432 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 GCAP28676 217 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 GRPRP30550 384 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 ARRB2P32121 409 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 SAA4P35542 130 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 ACAA2P42765 397 aaKnown RBP4.77□□□□□ -1.65
SIK3-208ENST00000472648 SRP9P49458 86 aaKnown RBP4.77□□□□□ -1.65
SIK3-208ENST00000472648 FUT5Q11128 374 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 PSG7Q13046 419 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 TAF11Q15544 211 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 KCNJ8Q15842 424 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 LRRC75BQ2VPJ9 315 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 CDONQ4KMG0 1287 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 PABPC1L2AQ5JQF8 200 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 KHDC1LQ5JSQ8 128 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 FAM69AQ5T7M9 428 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 HHATQ5VTY9 493 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 TNFAIP8L2Q6P589 184 aaPredicted RBP4.77□□□□□ -1.65
SIK3-208ENST00000472648 METAP1DQ6UB28 335 aaPredicted RBP4.77□□□□□ -1.65
SIK3-208ENST00000472648 LIAT1Q6ZQX7 453 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 CCDC121Q6ZUS5 278 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 LHFPL2Q6ZUX7 228 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 KRT77Q7Z794 578 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 MOGAT3Q86VF5 341 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 SLC22A9Q8IVM8 553 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 CMTM4Q8IZR5 234 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 LRRC18Q8N456 261 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 NATD1Q8N6N6 113 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 ATG16L2Q8NAA4 619 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 ADPRHL1Q8NDY3 354 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 OR51G2Q8NGK0 314 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 GATAD1Q8WUU5 269 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 DYDC1Q8WWB3 177 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 SLC38A4Q969I6 547 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 APOPT1Q96IL0 206 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 TXNDC15Q96J42 360 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 FCRL1Q96LA6 429 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 OR5M11Q96RB7 305 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 CITED4Q96RK1 184 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 PRR25Q96S07 402 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 TMEM109Q9BVC6 243 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 PTDSS2Q9BVG9 487 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 MEGF9Q9H1U4 602 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 KCNN2Q9H2S1 579 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 ZNF702PQ9H963 129 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 ELOVL3Q9HB03 270 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 CCNB1IP1Q9NPC3 277 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 TBCCD1Q9NVR7 557 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 MKS1Q9NXB0 559 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 ONECUT1Q9UBC0 465 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 LGALS13Q9UHV8 139 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 NDRG4Q9ULP0 352 aaKnown RBP4.77□□□□□ -1.65
SIK3-208ENST00000472648 HIF3AQ9Y2N7 669 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 KPTNQ9Y664 436 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 KIAA1109Q2LD37 5005 aa4.77□□□□□ -1.65
SIK3-208ENST00000472648 A0A1B0GW55 424 aa4.76□□□□□ -1.65
SIK3-208ENST00000472648 HMGB1P1B2RPK0 211 aaPredicted RBP4.76□□□□□ -1.65
SIK3-208ENST00000472648 MS4A18H0YCH9 400 aa4.76□□□□□ -1.65
SIK3-208ENST00000472648 H3BQF6 201 aa4.76□□□□□ -1.65
SIK3-208ENST00000472648 OR10H3O60404 316 aa4.76□□□□□ -1.65
SIK3-208ENST00000472648 NPHS1O60500 1241 aa4.76□□□□□ -1.65
SIK3-208ENST00000472648 FZD7O75084 574 aa4.76□□□□□ -1.65
SIK3-208ENST00000472648 HPRP00739 348 aa4.76□□□□□ -1.65
SIK3-208ENST00000472648 DBIP07108 87 aaKnown RBP4.76□□□□□ -1.65
SIK3-208ENST00000472648 SBK3P0C264 359 aa4.76□□□□□ -1.65
SIK3-208ENST00000472648 DUX4L2P0CJ85 424 aa4.76□□□□□ -1.65
SIK3-208ENST00000472648 DUX4L3P0CJ86 424 aa4.76□□□□□ -1.65
SIK3-208ENST00000472648 DUX4L5P0CJ88 424 aa4.76□□□□□ -1.65
SIK3-208ENST00000472648 DUX4L6P0CJ89 424 aa4.76□□□□□ -1.65
SIK3-208ENST00000472648 DUX4L7P0CJ90 424 aa4.76□□□□□ -1.65
SIK3-208ENST00000472648 CPA3P15088 417 aa4.76□□□□□ -1.65
SIK3-208ENST00000472648 PAICSP22234 425 aaKnown RBP4.76□□□□□ -1.65
SIK3-208ENST00000472648 ATP5F1P24539 256 aaPredicted RBP4.76□□□□□ -1.65
SIK3-208ENST00000472648 PSMB10P40306 273 aa4.76□□□□□ -1.65
SIK3-208ENST00000472648 MAGEA12P43365 314 aa4.76□□□□□ -1.65
SIK3-208ENST00000472648 ZNF84P51523 738 aa4.76□□□□□ -1.65
SIK3-208ENST00000472648 BIDP55957 195 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms