RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 TRPC5OSA6NMA1 111 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 CPSF4LA6NMK7 179 aaKnown RBP7.8□□□□□ -1.16
VCL-204ENST00000472585 BLOC1S5-TXNDC5H3BN57 136 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 M0QX08 132 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 KPNA4O00629 521 aaPredicted RBP7.8□□□□□ -1.16
VCL-204ENST00000472585 RGS16O15492 202 aaPredicted RBP7.8□□□□□ -1.16
VCL-204ENST00000472585 CHP2O43745 196 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 ZNF205O95201 554 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 OR6A2O95222 327 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 FARS2O95363 451 aaKnown RBP7.8□□□□□ -1.16
VCL-204ENST00000472585 TSPAN15O95858 294 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 PTHP01270 115 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 OPN1SWP03999 348 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 WNT2P09544 360 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 TSPAN19P0C672 248 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 GPX2P18283 190 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 FUT4P22083 530 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 APLNRP35414 380 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 ERFP50548 548 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 CRYBA2P53672 197 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 PCBP3P57721 371 aaKnown RBP7.8□□□□□ -1.16
VCL-204ENST00000472585 PPP1CBP62140 327 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 ERVK-25P63136 954 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 MRPS34P82930 218 aaKnown RBP7.8□□□□□ -1.16
VCL-204ENST00000472585 PLP2Q04941 152 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 RPL18Q07020 188 aaKnown RBP7.8□□□□□ -1.16
VCL-204ENST00000472585 SELPLGQ14242 412 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 FAM189A2Q15884 450 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 NRN1LQ496H8 165 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 VAX1Q5SQQ9 334 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 CEP85LQ5SZL2 805 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 ARMC4Q5T2S8 1044 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 ZNF613Q6PF04 617 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 FIP1L1Q6UN15 594 aaKnown RBP7.8□□□□□ -1.16
VCL-204ENST00000472585 DLEU7Q6UYE1 221 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 DPPA2Q7Z7J5 298 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 ARMC8Q8IUR7 673 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 PARP8Q8N3A8 854 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 ZNF283Q8N7M2 679 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 ANKRD42Q8N9B4 389 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 NOXO1Q8NFA2 376 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 MOSPD2Q8NHP6 518 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 MRAPQ8TCY5 172 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 ADAMTS16Q8TE57 1224 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 ASB10Q8WXI3 467 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 C1orf198Q9H425 327 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 PRDM13Q9H4Q3 707 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 SIAEQ9HAT2 523 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 NANSQ9NR45 359 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 ZNF229Q9UJW7 825 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 RNF114Q9Y508 228 aa7.8□□□□□ -1.16
VCL-204ENST00000472585 PLXNB1O43157 2135 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 ICMTO60725 284 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 FMO6PO60774 539 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 ERLIN1O75477 346 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 NDUFA7O95182 113 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 IGHG1P01857 330 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 PRB2P02812 416 aaPredicted RBP7.79□□□□□ -1.16
VCL-204ENST00000472585 ACADSP16219 412 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 SELEP16581 610 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 FUT1P19526 365 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 CD247P20963 164 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 LORP23490 312 aaPredicted RBP7.79□□□□□ -1.16
VCL-204ENST00000472585 LAP3P28838 519 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 AQP2P41181 271 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 MRPL19P49406 292 aaKnown RBP7.79□□□□□ -1.16
VCL-204ENST00000472585 CLRN1P58418 232 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 PSMA6P60900 246 aaKnown RBP7.79□□□□□ -1.16
VCL-204ENST00000472585 TNFAIP6P98066 277 aaPredicted RBP7.79□□□□□ -1.16
VCL-204ENST00000472585 HSF2Q03933 536 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 SGCAQ16586 387 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 C2orf68Q2NKX9 166 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 DEFB112Q30KQ8 113 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 BEAN1Q3B7T3 259 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 TMEM155Q4W5P6 130 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 FAM27BQ5VT28 67 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 SLC25A47Q6Q0C1 308 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 EPGNQ6UW88 154 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 BRD3OSQ6XYD6 125 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 NKAIN4Q8IVV8 208 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 KIRREL3Q8IZU9 778 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 KLHL36Q8N4N3 616 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 MREGQ8N565 214 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 GOLGA6L1Q8N7Z2 621 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 PFN4Q8NHR9 129 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 ABHD4Q8TB40 342 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 ITLN1Q8WWA0 313 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 NSMAFQ92636 917 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 UPRTQ96BW1 309 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 ZNF607Q96SK3 696 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 DIRC2Q96SL1 478 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 SPATA5L1Q9BVQ7 753 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 OR2H1Q9GZK4 316 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 EGLN1Q9GZT9 426 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 LRMDAQ9H2I8 198 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 TMEM165Q9HC07 324 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 SLCO1B3Q9NPD5 702 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 C20orf141Q9NUB4 165 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 C1RLQ9NZP8 487 aa7.79□□□□□ -1.16
VCL-204ENST00000472585 SELENONQ9NZV5 590 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms