RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 FAM86B1Q8N7N1 296 aa11.67□□□□□ -0.54
HMGN1-211ENST00000471260 OR2T29Q8NH02 315 aa11.67□□□□□ -0.54
HMGN1-211ENST00000471260 PITX2Q99697 317 aa11.67□□□□□ -0.54
HMGN1-211ENST00000471260 NOX3Q9HBY0 568 aa11.67□□□□□ -0.54
HMGN1-211ENST00000471260 MEPEQ9NQ76 525 aaPredicted RBP11.67□□□□□ -0.54
HMGN1-211ENST00000471260 TPRKBQ9Y3C4 175 aa11.67□□□□□ -0.54
HMGN1-211ENST00000471260 CMAHPQ9Y471 501 aa11.67□□□□□ -0.54
HMGN1-211ENST00000471260 SONP18583 2426 aaKnown RBP11.67□□□□□ -0.54
HMGN1-211ENST00000471260 A0A1W2PRG6 482 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 NPIPB13A6NJU9 1138 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 NPIPB4C9JG80 1138 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 BLOC1S5-TXNDC5H3BN57 136 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 KPNA4O00629 521 aaPredicted RBP11.66□□□□□ -0.54
HMGN1-211ENST00000471260 DHHO43323 396 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 OR7A10O76100 309 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 FARS2O95363 451 aaKnown RBP11.66□□□□□ -0.54
HMGN1-211ENST00000471260 CLIC3O95833 236 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 IFNA2P01563 188 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 IGHG1P01857 330 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 FABP3P05413 133 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 PGA4P0DJD7 388 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 PGA3P0DJD8 388 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 OR8G3PP0DMU2 310 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 ZNF35P13682 527 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 FUT1P19526 365 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 GLRXP35754 106 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 NR4A2P43354 598 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 ISL1P61371 349 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 RPS23P62266 143 aaKnown RBP11.66□□□□□ -0.54
HMGN1-211ENST00000471260 SELENOWP63302 87 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 CD47Q08722 323 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 SNTB2Q13425 540 aaKnown RBP11.66□□□□□ -0.54
HMGN1-211ENST00000471260 PIN1Q13526 163 aaPredicted RBP11.66□□□□□ -0.54
HMGN1-211ENST00000471260 NEDD8Q15843 81 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 HIST3H3Q16695 136 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 KDM4DQ6B0I6 523 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 CYB5R2Q6BCY4 276 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 CBLL1Q75N03 491 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 ANKRD13BQ86YJ7 626 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 NKAIN4Q8IVV8 208 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 WDFY1Q8IWB7 410 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 SPARTQ8N0X7 666 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 SLC22A24Q8N4F4 322 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 TBC1D15Q8TC07 691 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 TMEM239Q8WW34 195 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 TRUB1Q8WWH5 349 aaKnown RBP11.66□□□□□ -0.54
HMGN1-211ENST00000471260 IPCEF1Q8WWN9 437 aaPredicted RBP11.66□□□□□ -0.54
HMGN1-211ENST00000471260 FCGR1BQ92637 280 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 SGTBQ96EQ0 304 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 OCEL1Q9H607 264 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 ZNF224Q9NZL3 707 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 TMEFF2Q9UIK5 374 aaPredicted RBP11.66□□□□□ -0.54
HMGN1-211ENST00000471260 ENPP5Q9UJA9 477 aa11.66□□□□□ -0.54
HMGN1-211ENST00000471260 YLPM1P49750 1951 aaKnown RBP11.66□□□□□ -0.54
HMGN1-211ENST00000471260 TMEM129A0AVI4 362 aa11.65□□□□□ -0.54
HMGN1-211ENST00000471260 KIAA1324LA8MWY0 1029 aaPredicted RBP11.65□□□□□ -0.54
HMGN1-211ENST00000471260 SLC22A1O15245 554 aa11.65□□□□□ -0.54
HMGN1-211ENST00000471260 CLPXO76031 633 aa11.65□□□□□ -0.54
HMGN1-211ENST00000471260 LY6HO94772 140 aa11.65□□□□□ -0.54
HMGN1-211ENST00000471260 GABARAPO95166 117 aa11.65□□□□□ -0.54
HMGN1-211ENST00000471260 SERPINA5P05154 406 aa11.65□□□□□ -0.54
HMGN1-211ENST00000471260 TSPAN19P0C672 248 aa11.65□□□□□ -0.54
HMGN1-211ENST00000471260 GIPRP48546 466 aa11.65□□□□□ -0.54
HMGN1-211ENST00000471260 GZMKP49863 264 aa11.65□□□□□ -0.54
HMGN1-211ENST00000471260 DAP3P51398 398 aaKnown RBP11.65□□□□□ -0.54
HMGN1-211ENST00000471260 GALK2Q01415 458 aa11.65□□□□□ -0.54
HMGN1-211ENST00000471260 RPL18Q07020 188 aaKnown RBP11.65□□□□□ -0.54
HMGN1-211ENST00000471260 PIGFQ07326 219 aa11.65□□□□□ -0.54
HMGN1-211ENST00000471260 ST3GAL3Q11203 375 aa11.65□□□□□ -0.54
HMGN1-211ENST00000471260 ZIK1Q3SY52 487 aaPredicted RBP11.65□□□□□ -0.54
HMGN1-211ENST00000471260 CHRFAM7AQ494W8 412 aa11.65□□□□□ -0.54
HMGN1-211ENST00000471260 PODNL1Q6PEZ8 512 aa11.65□□□□□ -0.54
HMGN1-211ENST00000471260 LRFN4Q6PJG9 635 aa11.65□□□□□ -0.54
HMGN1-211ENST00000471260 DEF8Q6ZN54 512 aa11.65□□□□□ -0.54
HMGN1-211ENST00000471260 MRPL24Q96A35 216 aaKnown RBP11.65□□□□□ -0.54
HMGN1-211ENST00000471260 MRPL13Q9BYD1 178 aaKnown RBP11.65□□□□□ -0.54
HMGN1-211ENST00000471260 WDR12Q9GZL7 423 aaKnown RBP11.65□□□□□ -0.54
HMGN1-211ENST00000471260 C1orf198Q9H425 327 aa11.65□□□□□ -0.54
HMGN1-211ENST00000471260 TMEM38BQ9NVV0 291 aa11.65□□□□□ -0.54
HMGN1-211ENST00000471260 SCN3BQ9NY72 215 aa11.65□□□□□ -0.54
HMGN1-211ENST00000471260 ENOPH1Q9UHY7 261 aa11.65□□□□□ -0.54
HMGN1-211ENST00000471260 CDC42EP3Q9UKI2 254 aa11.65□□□□□ -0.54
HMGN1-211ENST00000471260 MED31Q9Y3C7 131 aa11.65□□□□□ -0.54
HMGN1-211ENST00000471260 A0A1W2PPW3 197 aa11.64□□□□□ -0.55
HMGN1-211ENST00000471260 SLC22A23A1A5C7 686 aa11.64□□□□□ -0.55
HMGN1-211ENST00000471260 MCIDASD6RGH6 385 aa11.64□□□□□ -0.55
HMGN1-211ENST00000471260 E9PQ18 207 aa11.64□□□□□ -0.55
HMGN1-211ENST00000471260 PTHP01270 115 aa11.64□□□□□ -0.55
HMGN1-211ENST00000471260 QDPRP09417 244 aa11.64□□□□□ -0.55
HMGN1-211ENST00000471260 IGHV4-31P0DP07 118 aa11.64□□□□□ -0.55
HMGN1-211ENST00000471260 NR2C1P13056 603 aa11.64□□□□□ -0.55
HMGN1-211ENST00000471260 GIFP27352 417 aa11.64□□□□□ -0.55
HMGN1-211ENST00000471260 OR1E2P47887 323 aa11.64□□□□□ -0.55
HMGN1-211ENST00000471260 ZNF84P51523 738 aa11.64□□□□□ -0.55
HMGN1-211ENST00000471260 ZNF133P52736 654 aaPredicted RBP11.64□□□□□ -0.55
HMGN1-211ENST00000471260 UGT2B15P54855 530 aa11.64□□□□□ -0.55
HMGN1-211ENST00000471260 CLRN1P58418 232 aa11.64□□□□□ -0.55
HMGN1-211ENST00000471260 MELKQ14680 651 aa11.64□□□□□ -0.55
HMGN1-211ENST00000471260 SLC36A2Q495M3 483 aa11.64□□□□□ -0.55
HMGN1-211ENST00000471260 FAHD1Q6P587 224 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms