RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 RHBGQ9H310 441 aa2.17□□□□□ -2.06
UBXN4-206ENST00000470687 ZDHHC11Q9H8X9 412 aa2.17□□□□□ -2.06
UBXN4-206ENST00000470687 WDR76Q9H967 626 aa2.17□□□□□ -2.06
UBXN4-206ENST00000470687 CALHM2Q9HA72 323 aa2.17□□□□□ -2.06
UBXN4-206ENST00000470687 WDR41Q9HAD4 459 aa2.17□□□□□ -2.06
UBXN4-206ENST00000470687 ELL3Q9HB65 397 aaPredicted RBP2.17□□□□□ -2.06
UBXN4-206ENST00000470687 ADAP2Q9NPF8 381 aa2.17□□□□□ -2.06
UBXN4-206ENST00000470687 B3GAT2Q9NPZ5 323 aa2.17□□□□□ -2.06
UBXN4-206ENST00000470687 YAE1D1Q9NRH1 226 aa2.17□□□□□ -2.06
UBXN4-206ENST00000470687 FAM212BQ9NTI7 297 aaPredicted RBP2.17□□□□□ -2.06
UBXN4-206ENST00000470687 MAN2C1Q9NTJ4 1040 aa2.17□□□□□ -2.06
UBXN4-206ENST00000470687 C20orf96Q9NUD7 363 aaPredicted RBP2.17□□□□□ -2.06
UBXN4-206ENST00000470687 STOX2Q9P2F5 926 aaPredicted RBP2.17□□□□□ -2.06
UBXN4-206ENST00000470687 KLK11Q9UBX7 282 aa2.17□□□□□ -2.06
UBXN4-206ENST00000470687 MTRF1LQ9UGC7 380 aaKnown RBP2.17□□□□□ -2.06
UBXN4-206ENST00000470687 SLC2A6Q9UGQ3 507 aa2.17□□□□□ -2.06
UBXN4-206ENST00000470687 IL20RAQ9UHF4 553 aa2.17□□□□□ -2.06
UBXN4-206ENST00000470687 PHF11Q9UIL8 331 aa2.17□□□□□ -2.06
UBXN4-206ENST00000470687 BOKQ9UMX3 212 aaPredicted RBP2.17□□□□□ -2.06
UBXN4-206ENST00000470687 NPIPA1Q9UND3 350 aa2.17□□□□□ -2.06
UBXN4-206ENST00000470687 PDE10AQ9Y233 779 aa2.17□□□□□ -2.06
UBXN4-206ENST00000470687 NTNG1Q9Y2I2 539 aa2.17□□□□□ -2.06
UBXN4-206ENST00000470687 NAALAD2Q9Y3Q0 740 aa2.17□□□□□ -2.06
UBXN4-206ENST00000470687 FKBP7Q9Y680 259 aa2.17□□□□□ -2.06
UBXN4-206ENST00000470687 CPAMD8Q8IZJ3 1885 aa2.17□□□□□ -2.06
UBXN4-206ENST00000470687 NCOA6Q14686 2063 aaPredicted RBP2.17□□□□□ -2.06
UBXN4-206ENST00000470687 MED13LQ71F56 2210 aa2.17□□□□□ -2.06
UBXN4-206ENST00000470687 PHF3Q92576 2039 aaKnown RBP2.17□□□□□ -2.06
UBXN4-206ENST00000470687 DNAJC13O75165 2243 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 A0A087WW49 117 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 C15orf38-AP3S2A0A0A6YYH1 394 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 TRGV5A0A0B4J1U4 118 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 NPIPA5A0A0B4J1W7 369 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 A0A1B0GTH9 108 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 TMEM89A2RUT3 159 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 TUBAL3A6NHL2 446 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 GOLGA6L10A6NI86 522 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 SGK494L7N484 410 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 PGRMC1O00264 195 aaKnown RBP2.16□□□□□ -2.06
UBXN4-206ENST00000470687 FOXE1O00358 373 aaPredicted RBP2.16□□□□□ -2.06
UBXN4-206ENST00000470687 HAT1O14929 419 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 CASKO14936 926 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 P2RX6O15547 441 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 LCMT2O60294 686 aaKnown RBP2.16□□□□□ -2.06
UBXN4-206ENST00000470687 B4GALT2O60909 372 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 NIPSNAP2O75323 286 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 CTAG2O75638 210 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 STK16O75716 305 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 CBR3O75828 277 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 TOXO94900 526 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 GLSO94925 669 aaPredicted RBP2.16□□□□□ -2.06
UBXN4-206ENST00000470687 SCELO95171 688 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 C1QAP02745 245 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 OPN1MWP04001 364 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 IFNA16P05015 189 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 FCER2P06734 321 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 RHOXF2BP0C7M4 288 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 ZSCAN5DPP0CG00 497 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 SLC35E2BP0CK96 405 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 SLC35E2P0CK97 266 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 OPN1MW2P0DN77 364 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 OPN1MW3P0DN78 364 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 CD99P14209 185 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 UQCRBP14927 111 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 CPN1P15169 458 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 IL1RNP18510 177 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 ATP6V1C1P21283 382 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 GPX3P22352 226 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 HIST1H1TP22492 207 aaPredicted RBP2.16□□□□□ -2.06
UBXN4-206ENST00000470687 PAX7P23759 505 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 CRABP2P29373 138 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 SPRP35270 261 aaPredicted RBP2.16□□□□□ -2.06
UBXN4-206ENST00000470687 COILP38432 576 aaPredicted RBP2.16□□□□□ -2.06
UBXN4-206ENST00000470687 SOX3P41225 446 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 GRIA1P42261 906 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 FHITP49789 147 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 SLC7A2P52569 658 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 XGP55808 180 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 RAB38P57729 211 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 TBPL1P62380 186 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 PPIAP62937 165 aaKnown RBP2.16□□□□□ -2.06
UBXN4-206ENST00000470687 TRA2BP62995 288 aaKnown RBP2.16□□□□□ -2.06
UBXN4-206ENST00000470687 BTN3A2P78410 334 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 IGLV3-21P80748 117 aaPredicted RBP2.16□□□□□ -2.06
UBXN4-206ENST00000470687 CYCSP99999 105 aaKnown RBP2.16□□□□□ -2.06
UBXN4-206ENST00000470687 DHODHQ02127 395 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 PLGLB1Q02325 96 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 GUCY2DQ02846 1103 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 TLE4Q04727 773 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 MFGE8Q08431 387 aaPredicted RBP2.16□□□□□ -2.06
UBXN4-206ENST00000470687 CALCOCO2Q13137 446 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 NAB1Q13506 487 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 RCAN2Q14206 197 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 P2RY14Q15391 338 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 SIX1Q15475 284 aaPredicted RBP2.16□□□□□ -2.06
UBXN4-206ENST00000470687 BCL2A1Q16548 175 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 HAGHQ16775 308 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 SLC36A3Q495N2 470 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 DEFB134Q4QY38 66 aa2.16□□□□□ -2.06
UBXN4-206ENST00000470687 PIGGQ5H8A4 983 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms