RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 OR4D2P58180 307 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 SLC26A5P58743 744 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 NCALDP61601 193 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 KCNJ2P63252 427 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 IGLV3-21P80748 117 aaPredicted RBP3.29□□□□□ -1.88
COL9A1-206ENST00000470652 DHODHQ02127 395 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 ACTN3Q08043 901 aaPredicted RBP3.29□□□□□ -1.88
COL9A1-206ENST00000470652 TGM3Q08188 693 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 STX4Q12846 297 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 EIF3IQ13347 325 aaKnown RBP3.29□□□□□ -1.88
COL9A1-206ENST00000470652 LASP1Q14847 261 aaKnown RBP3.29□□□□□ -1.88
COL9A1-206ENST00000470652 TOMM20Q15388 145 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 FAM189A2Q15884 450 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 DUSP5Q16690 384 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 DEFB109BQ30KR1 87 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 MS4A18Q3C1V0 323 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 OR52E8Q6IFG1 317 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 PRMT9Q6P2P2 845 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 TNFAIP8L2Q6P589 184 aaPredicted RBP3.29□□□□□ -1.88
COL9A1-206ENST00000470652 CYB5D1Q6P9G0 228 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 ANGPTL8Q6UXH0 198 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 ZNF621Q6ZSS3 439 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 TRPM8Q7Z2W7 1104 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 DHDDSQ86SQ9 333 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 RNF130Q86XS8 419 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 TCEANCQ8N8B7 351 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 ANKFN1Q8N957 763 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 LRTM2Q8N967 370 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 C17orf47Q8NEP4 570 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 OR11G2Q8NGC1 345 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 OR4K14Q8NGD5 310 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 OR4C15Q8NGM1 316 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 OR2Y1Q8NGV0 311 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 ZNF721Q8TF20 911 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 NPRL2Q8WTW4 380 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 GTF2H4Q92759 462 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 CDS1Q92903 461 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 RIT1Q92963 219 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 NXPE2Q96DL1 559 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 WFDC6Q9BQY6 131 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 CENPKQ9BS16 269 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 SLC35A5Q9BS91 424 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 SLC25A23Q9BV35 468 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 NSRP1Q9H0G5 558 aaKnown RBP3.29□□□□□ -1.88
COL9A1-206ENST00000470652 GPN2Q9H9Y4 310 aaPredicted RBP3.29□□□□□ -1.88
COL9A1-206ENST00000470652 CXorf21Q9HAI6 301 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 LYARQ9NX58 379 aaKnown RBP3.29□□□□□ -1.88
COL9A1-206ENST00000470652 CMTM6Q9NX76 183 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 GIN1Q9NXP7 522 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 AHSPQ9NZD4 102 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 AKAP7Q9P0M2 348 aaPredicted RBP3.29□□□□□ -1.88
COL9A1-206ENST00000470652 BCAP29Q9UHQ4 241 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 PHF11Q9UIL8 331 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 ENTPD4Q9Y227 616 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 FARSAQ9Y285 508 aaKnown RBP3.29□□□□□ -1.88
COL9A1-206ENST00000470652 V9GYQ6 96 aa3.29□□□□□ -1.88
COL9A1-206ENST00000470652 PRRC2CQ9Y520 2896 aaKnown RBP3.28□□□□□ -1.88
COL9A1-206ENST00000470652 ACACBO00763 2458 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 PKD1L2Q7Z442 2459 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 IGHV4-30-2A0A087WSY4 118 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 IQCMA0A1B0GVH7 501 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 A0A1W2PP18 115 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 PINLYPA6NC86 204 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 SAGE2PA6NJ88 616 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 C9J4A7 227 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 TMX2-CTNND1H3BSU7 103 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 K7EQD1 137 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 TXNDC9O14530 226 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 RFXANKO14593 260 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 SRSF10O75494 262 aaKnown RBP3.28□□□□□ -1.88
COL9A1-206ENST00000470652 GCM2O75603 506 aaPredicted RBP3.28□□□□□ -1.88
COL9A1-206ENST00000470652 MT-ND1P03886 318 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 OPN1SWP03999 348 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 IGKV3-11P04433 115 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 HMGN2P05204 90 aaKnown RBP3.28□□□□□ -1.88
COL9A1-206ENST00000470652 KLK3P07288 261 aaPredicted RBP3.28□□□□□ -1.88
COL9A1-206ENST00000470652 OR12D1P0DN82 309 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 LIPCP11150 499 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 CSNK2A2P19784 350 aaPredicted RBP3.28□□□□□ -1.88
COL9A1-206ENST00000470652 TCN1P20061 433 aaPredicted RBP3.28□□□□□ -1.88
COL9A1-206ENST00000470652 PRPS1L1P21108 318 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 ATP6V1B2P21281 511 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 RFC3P40938 356 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 FRKP42685 505 aaPredicted RBP3.28□□□□□ -1.88
COL9A1-206ENST00000470652 ASMTP46597 345 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 EMDP50402 254 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 GZMMP51124 257 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 ATP4BP51164 291 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 SLC7A2P52569 658 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 PPP5CP53041 499 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 MTCP1P56278 107 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 FBXW4P57775 412 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 KCNK10P57789 538 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 STX1BP61266 288 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 PSME3P61289 254 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 NAA20P61599 178 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 TRA2BP62995 288 aaKnown RBP3.28□□□□□ -1.88
COL9A1-206ENST00000470652 CDC20Q12834 499 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 COX10Q12887 443 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 CEACAM7Q14002 265 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms