RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 HOXB6P17509 224 aaKnown RBP12.16□□□□□ -0.46
TOP3B-215ENST00000470338 RAD52P43351 418 aa12.16□□□□□ -0.46
TOP3B-215ENST00000470338 UCP2P55851 309 aa12.16□□□□□ -0.46
TOP3B-215ENST00000470338 PPP1R8Q12972 351 aaKnown RBP12.16□□□□□ -0.46
TOP3B-215ENST00000470338 GK3PQ14409 553 aa12.16□□□□□ -0.46
TOP3B-215ENST00000470338 KCNMB1Q16558 191 aa12.16□□□□□ -0.46
TOP3B-215ENST00000470338 RPL13AP3Q6NVV1 102 aa12.16□□□□□ -0.46
TOP3B-215ENST00000470338 CLEC2AQ6UVW9 174 aa12.16□□□□□ -0.46
TOP3B-215ENST00000470338 UGT2A3Q6UWM9 527 aa12.16□□□□□ -0.46
TOP3B-215ENST00000470338 LRP11Q86VZ4 500 aa12.16□□□□□ -0.46
TOP3B-215ENST00000470338 GLB1L2Q8IW92 636 aa12.16□□□□□ -0.46
TOP3B-215ENST00000470338 ALDH16A1Q8IZ83 802 aa12.16□□□□□ -0.46
TOP3B-215ENST00000470338 C10orf105Q8TEF2 133 aa12.16□□□□□ -0.46
TOP3B-215ENST00000470338 CANT1Q8WVQ1 401 aa12.16□□□□□ -0.46
TOP3B-215ENST00000470338 IFT27Q9BW83 186 aa12.16□□□□□ -0.46
TOP3B-215ENST00000470338 CHID1Q9BWS9 393 aa12.16□□□□□ -0.46
TOP3B-215ENST00000470338 BCL2L14Q9BZR8 327 aa12.16□□□□□ -0.46
TOP3B-215ENST00000470338 RAB1BQ9H0U4 201 aa12.16□□□□□ -0.46
TOP3B-215ENST00000470338 REEP1Q9H902 201 aa12.16□□□□□ -0.46
TOP3B-215ENST00000470338 EMC7Q9NPA0 242 aa12.16□□□□□ -0.46
TOP3B-215ENST00000470338 IL20Q9NYY1 176 aa12.16□□□□□ -0.46
TOP3B-215ENST00000470338 COA3Q9Y2R0 106 aaPredicted RBP12.16□□□□□ -0.46
TOP3B-215ENST00000470338 SAMHD1Q9Y3Z3 626 aaKnown RBP12.16□□□□□ -0.46
TOP3B-215ENST00000470338 FKBP7Q9Y680 259 aa12.16□□□□□ -0.46
TOP3B-215ENST00000470338 A0A096LNT2 108 aa12.15□□□□□ -0.46
TOP3B-215ENST00000470338 DHRS12A0PJE2 317 aa12.15□□□□□ -0.46
TOP3B-215ENST00000470338 DCTN6O00399 190 aa12.15□□□□□ -0.46
TOP3B-215ENST00000470338 GSC2O15499 205 aa12.15□□□□□ -0.46
TOP3B-215ENST00000470338 ICMTO60725 284 aa12.15□□□□□ -0.46
TOP3B-215ENST00000470338 CSF3P09919 207 aa12.15□□□□□ -0.46
TOP3B-215ENST00000470338 FAM157BP0CG42 384 aa12.15□□□□□ -0.46
TOP3B-215ENST00000470338 ZNF250P15622 560 aa12.15□□□□□ -0.46
TOP3B-215ENST00000470338 HIST1H1CP16403 213 aaKnown RBP12.15□□□□□ -0.46
TOP3B-215ENST00000470338 CRABP1P29762 137 aa12.15□□□□□ -0.46
TOP3B-215ENST00000470338 LSM6P62312 80 aaKnown RBP12.15□□□□□ -0.46
TOP3B-215ENST00000470338 RGS7BPQ6MZT1 257 aaPredicted RBP12.15□□□□□ -0.46
TOP3B-215ENST00000470338 ZNF774Q6NX45 483 aa12.15□□□□□ -0.46
TOP3B-215ENST00000470338 LEG1Q6P5S2 330 aa12.15□□□□□ -0.46
TOP3B-215ENST00000470338 RASSF6Q6ZTQ3 369 aa12.15□□□□□ -0.46
TOP3B-215ENST00000470338 ZCCHC24Q8N2G6 241 aaKnown RBP12.15□□□□□ -0.46
TOP3B-215ENST00000470338 NEU4Q8WWR8 484 aaPredicted RBP12.15□□□□□ -0.46
TOP3B-215ENST00000470338 FAM168AQ92567 244 aa12.15□□□□□ -0.46
TOP3B-215ENST00000470338 FOXN4Q96NZ1 517 aa12.15□□□□□ -0.46
TOP3B-215ENST00000470338 TSSK2Q96PF2 358 aa12.15□□□□□ -0.46
TOP3B-215ENST00000470338 NMNAT3Q96T66 252 aa12.15□□□□□ -0.46
TOP3B-215ENST00000470338 SYT3Q9BQG1 590 aa12.15□□□□□ -0.46
TOP3B-215ENST00000470338 DGCR6LQ9BY27 220 aa12.15□□□□□ -0.46
TOP3B-215ENST00000470338 CADM1Q9BY67 442 aaKnown RBP12.15□□□□□ -0.46
TOP3B-215ENST00000470338 RERGLQ9H628 205 aa12.15□□□□□ -0.46
TOP3B-215ENST00000470338 EGLN3Q9H6Z9 239 aa12.15□□□□□ -0.46
TOP3B-215ENST00000470338 MYOZ1Q9NP98 299 aaPredicted RBP12.15□□□□□ -0.46
TOP3B-215ENST00000470338 B9D1Q9UPM9 204 aa12.15□□□□□ -0.46
TOP3B-215ENST00000470338 POMPQ9Y244 141 aa12.15□□□□□ -0.46
TOP3B-215ENST00000470338 CDH10Q9Y6N8 788 aa12.15□□□□□ -0.46
TOP3B-215ENST00000470338 U3KQV3 271 aa12.15□□□□□ -0.46
TOP3B-215ENST00000470338 IGLV3-9A0A075B6K5 115 aa12.14□□□□□ -0.47
TOP3B-215ENST00000470338 IGLV1-36A0A0B4J1U3 117 aa12.14□□□□□ -0.47
TOP3B-215ENST00000470338 TCRBV3S1A0A5B6 114 aa12.14□□□□□ -0.47
TOP3B-215ENST00000470338 C5orf49A4QMS7 147 aa12.14□□□□□ -0.47
TOP3B-215ENST00000470338 BHLHE40O14503 412 aa12.14□□□□□ -0.47
TOP3B-215ENST00000470338 MPZL1O95297 269 aa12.14□□□□□ -0.47
TOP3B-215ENST00000470338 CST1P01037 141 aa12.14□□□□□ -0.47
TOP3B-215ENST00000470338 ADRA2AP08913 450 aa12.14□□□□□ -0.47
TOP3B-215ENST00000470338 COX5BP10606 129 aa12.14□□□□□ -0.47
TOP3B-215ENST00000470338 SLC25A16P16260 332 aa12.14□□□□□ -0.47
TOP3B-215ENST00000470338 NOS3P29474 1203 aa12.14□□□□□ -0.47
TOP3B-215ENST00000470338 WNT5AP41221 380 aa12.14□□□□□ -0.47
TOP3B-215ENST00000470338 GDI2P50395 445 aaKnown RBP12.14□□□□□ -0.47
TOP3B-215ENST00000470338 KRTAP1-1Q07627 177 aa12.14□□□□□ -0.47
TOP3B-215ENST00000470338 AQP6Q13520 282 aa12.14□□□□□ -0.47
TOP3B-215ENST00000470338 FLOT2Q14254 428 aa12.14□□□□□ -0.47
TOP3B-215ENST00000470338 DNM1P34Q6PK57 102 aa12.14□□□□□ -0.47
TOP3B-215ENST00000470338 ZBTB46Q86UZ6 589 aa12.14□□□□□ -0.47
TOP3B-215ENST00000470338 JAZF1Q86VZ6 243 aa12.14□□□□□ -0.47
TOP3B-215ENST00000470338 OR6V1Q8N148 313 aa12.14□□□□□ -0.47
TOP3B-215ENST00000470338 AQP11Q8NBQ7 271 aa12.14□□□□□ -0.47
TOP3B-215ENST00000470338 MAPK1IP1LQ8NDC0 245 aa12.14□□□□□ -0.47
TOP3B-215ENST00000470338 OR4K13Q8NH42 304 aa12.14□□□□□ -0.47
TOP3B-215ENST00000470338 C11orf40Q8WZ69 217 aa12.14□□□□□ -0.47
TOP3B-215ENST00000470338 DDOQ99489 341 aa12.14□□□□□ -0.47
TOP3B-215ENST00000470338 PLA2G12AQ9BZM1 189 aa12.14□□□□□ -0.47
TOP3B-215ENST00000470338 MS4A5Q9H3V2 200 aa12.14□□□□□ -0.47
TOP3B-215ENST00000470338 DYNLRB1Q9NP97 96 aa12.14□□□□□ -0.47
TOP3B-215ENST00000470338 MYEF2Q9P2K5 600 aaKnown RBP12.14□□□□□ -0.47
TOP3B-215ENST00000470338 REV1Q9UBZ9 1251 aa12.14□□□□□ -0.47
TOP3B-215ENST00000470338 DUSP13Q9UII6 198 aa12.14□□□□□ -0.47
TOP3B-215ENST00000470338 FZR1Q9UM11 496 aa12.14□□□□□ -0.47
TOP3B-215ENST00000470338 OR6C68A6NDL8 312 aa12.13□□□□□ -0.47
TOP3B-215ENST00000470338 VWC2LB2RUY7 222 aa12.13□□□□□ -0.47
TOP3B-215ENST00000470338 M0R233 179 aa12.13□□□□□ -0.47
TOP3B-215ENST00000470338 NDUFS8O00217 210 aa12.13□□□□□ -0.47
TOP3B-215ENST00000470338 ATP5HO75947 161 aa12.13□□□□□ -0.47
TOP3B-215ENST00000470338 CLPTM1O96005 669 aa12.13□□□□□ -0.47
TOP3B-215ENST00000470338 RENP00797 406 aa12.13□□□□□ -0.47
TOP3B-215ENST00000470338 TP53P04637 393 aaPredicted RBP12.13□□□□□ -0.47
TOP3B-215ENST00000470338 LCKP06239 509 aa12.13□□□□□ -0.47
TOP3B-215ENST00000470338 ERCC1P07992 297 aaPredicted RBP12.13□□□□□ -0.47
TOP3B-215ENST00000470338 GAAP10253 952 aa12.13□□□□□ -0.47
TOP3B-215ENST00000470338 GSTM3P21266 225 aa12.13□□□□□ -0.47
TOP3B-215ENST00000470338 CCNOP22674 350 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms