RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 NOS3P29474 1203 aa15.55■□□□□ 0.08
MRPL28-208ENST00000469744 RPS19P39019 145 aaKnown RBP15.55■□□□□ 0.08
MRPL28-208ENST00000469744 LGALS3BPQ08380 585 aa15.55■□□□□ 0.08
MRPL28-208ENST00000469744 CRMP1Q14194 572 aa15.55■□□□□ 0.08
MRPL28-208ENST00000469744 GGTLC2Q14390 218 aa15.55■□□□□ 0.08
MRPL28-208ENST00000469744 ZNF181Q2M3W8 571 aa15.55■□□□□ 0.08
MRPL28-208ENST00000469744 SLC35D3Q5M8T2 416 aa15.55■□□□□ 0.08
MRPL28-208ENST00000469744 LCN1P1Q5VSP4 162 aa15.55■□□□□ 0.08
MRPL28-208ENST00000469744 C3orf33Q6P1S2 294 aa15.55■□□□□ 0.08
MRPL28-208ENST00000469744 FCRLAQ7L513 359 aa15.55■□□□□ 0.08
MRPL28-208ENST00000469744 NUFIP2Q7Z417 695 aaKnown RBP15.55■□□□□ 0.08
MRPL28-208ENST00000469744 TUSC5Q8IXB3 177 aa15.55■□□□□ 0.08
MRPL28-208ENST00000469744 CENPSQ8N2Z9 138 aa15.55■□□□□ 0.08
MRPL28-208ENST00000469744 SPRYD4Q8WW59 207 aaPredicted RBP15.55■□□□□ 0.08
MRPL28-208ENST00000469744 ST8SIA1Q92185 356 aa15.55■□□□□ 0.08
MRPL28-208ENST00000469744 PIK3IP1Q96FE7 263 aa15.55■□□□□ 0.08
MRPL28-208ENST00000469744 TRMT61AQ96FX7 289 aaKnown RBP15.55■□□□□ 0.08
MRPL28-208ENST00000469744 ERMAPQ96PL5 475 aaPredicted RBP15.55■□□□□ 0.08
MRPL28-208ENST00000469744 NRIP3Q9NQ35 241 aa15.55■□□□□ 0.08
MRPL28-208ENST00000469744 GLRX2Q9NS18 164 aa15.55■□□□□ 0.08
MRPL28-208ENST00000469744 BABAM2Q9NXR7 383 aa15.55■□□□□ 0.08
MRPL28-208ENST00000469744 HIF3AQ9Y2N7 669 aa15.55■□□□□ 0.08
MRPL28-208ENST00000469744 ROS1P08922 2347 aa15.55■□□□□ 0.08
MRPL28-208ENST00000469744 ACANP16112 2415 aa15.54■□□□□ 0.08
MRPL28-208ENST00000469744 C12orf71A8MTZ7 269 aa15.54■□□□□ 0.08
MRPL28-208ENST00000469744 DEFB108AA8MXU0 73 aa15.54■□□□□ 0.08
MRPL28-208ENST00000469744 LOC110117498-PIK3R3F6TDL0 507 aa15.54■□□□□ 0.08
MRPL28-208ENST00000469744 HLA-DPB1P04440 258 aa15.54■□□□□ 0.08
MRPL28-208ENST00000469744 RPS25P62851 125 aaKnown RBP15.54■□□□□ 0.08
MRPL28-208ENST00000469744 TRAM1Q15629 374 aa15.54■□□□□ 0.08
MRPL28-208ENST00000469744 ZNF74Q16587 644 aa15.54■□□□□ 0.08
MRPL28-208ENST00000469744 STAC2Q6ZMT1 411 aa15.54■□□□□ 0.08
MRPL28-208ENST00000469744 CCDC190Q86UF4 302 aa15.54■□□□□ 0.08
MRPL28-208ENST00000469744 POMGNT2Q8NAT1 580 aa15.54■□□□□ 0.08
MRPL28-208ENST00000469744 ZNF563Q8TA94 476 aa15.54■□□□□ 0.08
MRPL28-208ENST00000469744 SLC25A46Q96AG3 418 aa15.54■□□□□ 0.08
MRPL28-208ENST00000469744 OTULINQ96BN8 352 aa15.54■□□□□ 0.08
MRPL28-208ENST00000469744 WDFY2Q96P53 400 aa15.54■□□□□ 0.08
MRPL28-208ENST00000469744 ALG8Q9BVK2 526 aa15.54■□□□□ 0.08
MRPL28-208ENST00000469744 HCAR1Q9BXC0 346 aa15.54■□□□□ 0.08
MRPL28-208ENST00000469744 MED20Q9H944 212 aa15.54■□□□□ 0.08
MRPL28-208ENST00000469744 SMURF1Q9HCE7 757 aa15.54■□□□□ 0.08
MRPL28-208ENST00000469744 KLHL13Q9P2N7 655 aa15.54■□□□□ 0.08
MRPL28-208ENST00000469744 NOX1Q9Y5S8 564 aa15.54■□□□□ 0.08
MRPL28-208ENST00000469744 SETD2Q9BYW2 2564 aaPredicted RBP15.54■□□□□ 0.08
MRPL28-208ENST00000469744 FLNAP21333 2647 aaKnown RBP15.53■□□□□ 0.08
MRPL28-208ENST00000469744 DAPL1A0PJW8 107 aa15.53■□□□□ 0.08
MRPL28-208ENST00000469744 SLC35F4A4IF30 521 aa15.53■□□□□ 0.08
MRPL28-208ENST00000469744 GOSR1O95249 250 aa15.53■□□□□ 0.08
MRPL28-208ENST00000469744 RAF1P04049 648 aa15.53■□□□□ 0.08
MRPL28-208ENST00000469744 OCM2P0CE71 109 aa15.53■□□□□ 0.08
MRPL28-208ENST00000469744 OCMP0CE72 109 aaPredicted RBP15.53■□□□□ 0.08
MRPL28-208ENST00000469744 CRYGSP22914 178 aa15.53■□□□□ 0.08
MRPL28-208ENST00000469744 TAS2R43P59537 309 aa15.53■□□□□ 0.08
MRPL28-208ENST00000469744 RUNX1T1Q06455 604 aa15.53■□□□□ 0.08
MRPL28-208ENST00000469744 OXA1LQ15070 435 aa15.53■□□□□ 0.08
MRPL28-208ENST00000469744 RNPS1Q15287 305 aaKnown RBP15.53■□□□□ 0.08
MRPL28-208ENST00000469744 KLHL12Q53G59 568 aa15.53■□□□□ 0.08
MRPL28-208ENST00000469744 ARIH2OSQ8N7S6 290 aa15.53■□□□□ 0.08
MRPL28-208ENST00000469744 TMEM234Q8WY98 164 aa15.53■□□□□ 0.08
MRPL28-208ENST00000469744 DDOQ99489 341 aa15.53■□□□□ 0.08
MRPL28-208ENST00000469744 FOXC2Q99958 501 aa15.53■□□□□ 0.08
MRPL28-208ENST00000469744 ADGRL4Q9HBW9 690 aa15.53■□□□□ 0.08
MRPL28-208ENST00000469744 IER3IP1Q9Y5U9 82 aa15.53■□□□□ 0.08
MRPL28-208ENST00000469744 SMAD9O15198 467 aaKnown RBP15.52■□□□□ 0.08
MRPL28-208ENST00000469744 UPK1BO75841 260 aa15.52■□□□□ 0.08
MRPL28-208ENST00000469744 TXNDC12O95881 172 aa15.52■□□□□ 0.08
MRPL28-208ENST00000469744 LALBAP00709 142 aa15.52■□□□□ 0.08
MRPL28-208ENST00000469744 MT-ND5P03915 603 aa15.52■□□□□ 0.08
MRPL28-208ENST00000469744 THBDP07204 575 aa15.52■□□□□ 0.08
MRPL28-208ENST00000469744 TFPIP10646 304 aa15.52■□□□□ 0.08
MRPL28-208ENST00000469744 RAC3P60763 192 aa15.52■□□□□ 0.08
MRPL28-208ENST00000469744 TFAP2EQ6VUC0 442 aa15.52■□□□□ 0.08
MRPL28-208ENST00000469744 TMEM99Q8N816 258 aa15.52■□□□□ 0.08
MRPL28-208ENST00000469744 LRRC75AQ8NAA5 344 aa15.52■□□□□ 0.08
MRPL28-208ENST00000469744 OR52E2Q8NGJ4 325 aa15.52■□□□□ 0.08
MRPL28-208ENST00000469744 ZNF775Q96BV0 537 aaPredicted RBP15.52■□□□□ 0.08
MRPL28-208ENST00000469744 HS3ST6Q96QI5 342 aa15.52■□□□□ 0.08
MRPL28-208ENST00000469744 BARHL1Q9BZE3 327 aa15.52■□□□□ 0.08
MRPL28-208ENST00000469744 OR51V1Q9H2C8 321 aa15.52■□□□□ 0.08
MRPL28-208ENST00000469744 CXXC4Q9H2H0 198 aa15.52■□□□□ 0.08
MRPL28-208ENST00000469744 SERINC1Q9NRX5 453 aa15.52■□□□□ 0.08
MRPL28-208ENST00000469744 MCIDASD6RGH6 385 aa15.52■□□□□ 0.07
MRPL28-208ENST00000469744 CDRT1O95170 752 aa15.52■□□□□ 0.07
MRPL28-208ENST00000469744 ASAH2BP0C7U1 165 aa15.52■□□□□ 0.07
MRPL28-208ENST00000469744 HIST1H1CP16403 213 aaKnown RBP15.52■□□□□ 0.07
MRPL28-208ENST00000469744 RPL4P36578 427 aaKnown RBP15.52■□□□□ 0.07
MRPL28-208ENST00000469744 DIO1P49895 249 aa15.52■□□□□ 0.07
MRPL28-208ENST00000469744 SLC25A1P53007 311 aa15.52■□□□□ 0.07
MRPL28-208ENST00000469744 RPS7P62081 194 aaKnown RBP15.52■□□□□ 0.07
MRPL28-208ENST00000469744 FABP5Q01469 135 aa15.52■□□□□ 0.07
MRPL28-208ENST00000469744 IFITM3Q01628 133 aa15.52■□□□□ 0.07
MRPL28-208ENST00000469744 TSC22D1Q15714 1073 aa15.52■□□□□ 0.07
MRPL28-208ENST00000469744 SPANXN2Q5MJ10 180 aa15.52■□□□□ 0.07
MRPL28-208ENST00000469744 C22orf42Q6IC83 251 aa15.52■□□□□ 0.07
MRPL28-208ENST00000469744 BEND4Q6ZU67 534 aa15.52■□□□□ 0.07
MRPL28-208ENST00000469744 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.52■□□□□ 0.07
MRPL28-208ENST00000469744 CXorf67Q86X51 503 aaPredicted RBP15.52■□□□□ 0.07
MRPL28-208ENST00000469744 EGFL6Q8IUX8 553 aa15.52■□□□□ 0.07
MRPL28-208ENST00000469744 MRPL48Q96GC5 212 aaKnown RBP15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms