RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 RBMS3Q6XE24 437 aaKnown RBP10.34□□□□□ -0.75
COL5A1-207ENST00000469093 RFPL4BQ6ZWI9 263 aa10.34□□□□□ -0.75
COL5A1-207ENST00000469093 DOK3Q7L591 496 aa10.34□□□□□ -0.75
COL5A1-207ENST00000469093 ALDH16A1Q8IZ83 802 aa10.34□□□□□ -0.75
COL5A1-207ENST00000469093 BCL6BQ8N143 479 aaPredicted RBP10.34□□□□□ -0.75
COL5A1-207ENST00000469093 TMEM239Q8WW34 195 aa10.34□□□□□ -0.75
COL5A1-207ENST00000469093 RASSF5Q8WWW0 418 aa10.34□□□□□ -0.75
COL5A1-207ENST00000469093 POP5Q969H6 163 aaKnown RBP10.34□□□□□ -0.75
COL5A1-207ENST00000469093 C4orf45Q96LM5 186 aa10.34□□□□□ -0.75
COL5A1-207ENST00000469093 DUX5Q96PT3 197 aa10.34□□□□□ -0.75
COL5A1-207ENST00000469093 DCLRE1CQ96SD1 692 aaKnown RBP10.34□□□□□ -0.75
COL5A1-207ENST00000469093 DIRC2Q96SL1 478 aa10.34□□□□□ -0.75
COL5A1-207ENST00000469093 WNT5BQ9H1J7 359 aa10.34□□□□□ -0.75
COL5A1-207ENST00000469093 TXNIPQ9H3M7 391 aa10.34□□□□□ -0.75
COL5A1-207ENST00000469093 ZNF69Q9UC07 566 aa10.34□□□□□ -0.75
COL5A1-207ENST00000469093 EGFL7Q9UHF1 273 aa10.34□□□□□ -0.75
COL5A1-207ENST00000469093 RIMS3Q9UJD0 308 aa10.34□□□□□ -0.75
COL5A1-207ENST00000469093 PURGQ9UJV8 347 aaKnown RBP10.34□□□□□ -0.75
COL5A1-207ENST00000469093 NUP50Q9UKX7 468 aa10.34□□□□□ -0.75
COL5A1-207ENST00000469093 POLR3KQ9Y2Y1 108 aaPredicted RBP10.34□□□□□ -0.75
COL5A1-207ENST00000469093 TIMM10BQ9Y5J6 103 aa10.34□□□□□ -0.75
COL5A1-207ENST00000469093 PKD1L1Q8TDX9 2849 aa10.34□□□□□ -0.75
COL5A1-207ENST00000469093 NPIPB13A6NJU9 1138 aa10.33□□□□□ -0.76
COL5A1-207ENST00000469093 NPIPB4C9JG80 1138 aa10.33□□□□□ -0.76
COL5A1-207ENST00000469093 SHOX2O60902 331 aaPredicted RBP10.33□□□□□ -0.76
COL5A1-207ENST00000469093 IGHV2-70P01814 119 aa10.33□□□□□ -0.76
COL5A1-207ENST00000469093 VIMP08670 466 aaKnown RBP10.33□□□□□ -0.76
COL5A1-207ENST00000469093 CST2P09228 141 aa10.33□□□□□ -0.76
COL5A1-207ENST00000469093 TNFRSF1BP20333 461 aa10.33□□□□□ -0.76
COL5A1-207ENST00000469093 SLC6A9P48067 706 aa10.33□□□□□ -0.76
COL5A1-207ENST00000469093 TAS2R41P59536 307 aa10.33□□□□□ -0.76
COL5A1-207ENST00000469093 TNFAIP6P98066 277 aaPredicted RBP10.33□□□□□ -0.76
COL5A1-207ENST00000469093 CD47Q08722 323 aa10.33□□□□□ -0.76
COL5A1-207ENST00000469093 PSG7Q13046 419 aa10.33□□□□□ -0.76
COL5A1-207ENST00000469093 ZNF154Q13106 437 aa10.33□□□□□ -0.76
COL5A1-207ENST00000469093 CDK5R2Q13319 367 aa10.33□□□□□ -0.76
COL5A1-207ENST00000469093 MTX3Q5HYI7 312 aa10.33□□□□□ -0.76
COL5A1-207ENST00000469093 KLF17Q5JT82 389 aaPredicted RBP10.33□□□□□ -0.76
COL5A1-207ENST00000469093 ZNF774Q6NX45 483 aa10.33□□□□□ -0.76
COL5A1-207ENST00000469093 LRRC28Q86X40 367 aaPredicted RBP10.33□□□□□ -0.76
COL5A1-207ENST00000469093 CLDN22Q8N7P3 220 aa10.33□□□□□ -0.76
COL5A1-207ENST00000469093 TSPEARQ8WU66 669 aa10.33□□□□□ -0.76
COL5A1-207ENST00000469093 C1orf147Q96MC9 270 aaPredicted RBP10.33□□□□□ -0.76
COL5A1-207ENST00000469093 RBP7Q96R05 134 aa10.33□□□□□ -0.76
COL5A1-207ENST00000469093 PATZ1Q9HBE1 687 aaKnown RBP10.33□□□□□ -0.76
COL5A1-207ENST00000469093 TMEM106BQ9NUM4 274 aa10.33□□□□□ -0.76
COL5A1-207ENST00000469093 CGGBP1Q9UFW8 167 aaPredicted RBP10.33□□□□□ -0.76
COL5A1-207ENST00000469093 MED31Q9Y3C7 131 aa10.33□□□□□ -0.76
COL5A1-207ENST00000469093 AUP1Q9Y679 476 aa10.33□□□□□ -0.76
COL5A1-207ENST00000469093 H3BSA7 217 aa10.32□□□□□ -0.76
COL5A1-207ENST00000469093 OR5F1O95221 314 aa10.32□□□□□ -0.76
COL5A1-207ENST00000469093 IGHMP01871 453 aa10.32□□□□□ -0.76
COL5A1-207ENST00000469093 ARHGDIAP52565 204 aa10.32□□□□□ -0.76
COL5A1-207ENST00000469093 RPL27P61353 136 aaKnown RBP10.32□□□□□ -0.76
COL5A1-207ENST00000469093 SEC61A1P61619 476 aaKnown RBP10.32□□□□□ -0.76
COL5A1-207ENST00000469093 ENDOGQ14249 297 aaKnown RBP10.32□□□□□ -0.76
COL5A1-207ENST00000469093 TAF11Q15544 211 aa10.32□□□□□ -0.76
COL5A1-207ENST00000469093 NANOGP8Q6NSW7 305 aa10.32□□□□□ -0.76
COL5A1-207ENST00000469093 FOXL2NBQ6ZUU3 175 aa10.32□□□□□ -0.76
COL5A1-207ENST00000469093 ZNF283Q8N7M2 679 aa10.32□□□□□ -0.76
COL5A1-207ENST00000469093 STON2Q8WXE9 905 aa10.32□□□□□ -0.76
COL5A1-207ENST00000469093 THOC1Q96FV9 657 aaKnown RBP10.32□□□□□ -0.76
COL5A1-207ENST00000469093 ZNF48Q96MX3 618 aaPredicted RBP10.32□□□□□ -0.76
COL5A1-207ENST00000469093 GPA33Q99795 319 aa10.32□□□□□ -0.76
COL5A1-207ENST00000469093 ALG12Q9BV10 488 aa10.32□□□□□ -0.76
COL5A1-207ENST00000469093 ELOVL3Q9HB03 270 aa10.32□□□□□ -0.76
COL5A1-207ENST00000469093 PLEK2Q9NYT0 353 aa10.32□□□□□ -0.76
COL5A1-207ENST00000469093 BAG5Q9UL15 447 aa10.32□□□□□ -0.76
COL5A1-207ENST00000469093 HIF3AQ9Y2N7 669 aa10.32□□□□□ -0.76
COL5A1-207ENST00000469093 INSIG2Q9Y5U4 225 aa10.32□□□□□ -0.76
COL5A1-207ENST00000469093 GMNCA6NCL1 334 aa10.31□□□□□ -0.76
COL5A1-207ENST00000469093 DNAJC9-AS1A6NH13 148 aa10.31□□□□□ -0.76
COL5A1-207ENST00000469093 FBP2O00757 339 aa10.31□□□□□ -0.76
COL5A1-207ENST00000469093 TIMM8AO60220 97 aaPredicted RBP10.31□□□□□ -0.76
COL5A1-207ENST00000469093 SCG5P05408 212 aa10.31□□□□□ -0.76
COL5A1-207ENST00000469093 THRBP10828 461 aa10.31□□□□□ -0.76
COL5A1-207ENST00000469093 NR2C1P13056 603 aa10.31□□□□□ -0.76
COL5A1-207ENST00000469093 ZNF12P17014 697 aa10.31□□□□□ -0.76
COL5A1-207ENST00000469093 GUCA1AP43080 201 aaPredicted RBP10.31□□□□□ -0.76
COL5A1-207ENST00000469093 OR1E2P47887 323 aa10.31□□□□□ -0.76
COL5A1-207ENST00000469093 PCBD1P61457 104 aa10.31□□□□□ -0.76
COL5A1-207ENST00000469093 TOP3AQ13472 1001 aaPredicted RBP10.31□□□□□ -0.76
COL5A1-207ENST00000469093 TMEM155Q4W5P6 130 aa10.31□□□□□ -0.76
COL5A1-207ENST00000469093 ALG10Q5BKT4 473 aa10.31□□□□□ -0.76
COL5A1-207ENST00000469093 ZMAT1Q5H9K5 638 aa10.31□□□□□ -0.76
COL5A1-207ENST00000469093 ARMCX4Q5H9R4 360 aa10.31□□□□□ -0.76
COL5A1-207ENST00000469093 RABL3Q5HYI8 236 aa10.31□□□□□ -0.76
COL5A1-207ENST00000469093 Q6ZR03 302 aa10.31□□□□□ -0.76
COL5A1-207ENST00000469093 ZER1Q7Z7L7 766 aa10.31□□□□□ -0.76
COL5A1-207ENST00000469093 CALHM3Q86XJ0 350 aa10.31□□□□□ -0.76
COL5A1-207ENST00000469093 KLHL36Q8N4N3 616 aa10.31□□□□□ -0.76
COL5A1-207ENST00000469093 SPICQ8N5J4 248 aa10.31□□□□□ -0.76
COL5A1-207ENST00000469093 LRRC75AQ8NAA5 344 aa10.31□□□□□ -0.76
COL5A1-207ENST00000469093 FNDC8Q8TC99 324 aa10.31□□□□□ -0.76
COL5A1-207ENST00000469093 SAMD8Q96LT4 415 aa10.31□□□□□ -0.76
COL5A1-207ENST00000469093 SIGLEC11Q96RL6 698 aa10.31□□□□□ -0.76
COL5A1-207ENST00000469093 POLR2J2Q9GZM3 115 aaKnown RBP10.31□□□□□ -0.76
COL5A1-207ENST00000469093 POLR2J3Q9H1A7 115 aaKnown RBP10.31□□□□□ -0.76
COL5A1-207ENST00000469093 UNKLQ9H9P5 680 aaKnown RBP10.31□□□□□ -0.76
COL5A1-207ENST00000469093 TBCCD1Q9NVR7 557 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms