RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 GABARAPL3Q9BY60 117 aa10.37□□□□□ -0.75
VPS13D-204ENST00000469054 PRRG3Q9BZD7 231 aa10.37□□□□□ -0.75
VPS13D-204ENST00000469054 OR2H1Q9GZK4 316 aa10.37□□□□□ -0.75
VPS13D-204ENST00000469054 RIBC2Q9H4K1 309 aa10.37□□□□□ -0.75
VPS13D-204ENST00000469054 POU2F3Q9UKI9 436 aa10.37□□□□□ -0.75
VPS13D-204ENST00000469054 MOKQ9UQ07 419 aa10.37□□□□□ -0.75
VPS13D-204ENST00000469054 ORC6Q9Y5N6 252 aa10.37□□□□□ -0.75
VPS13D-204ENST00000469054 ABCA4P78363 2273 aa10.37□□□□□ -0.75
VPS13D-204ENST00000469054 IGHV2OR16-5A0A0B4J2B6 119 aa10.36□□□□□ -0.75
VPS13D-204ENST00000469054 IQCMA0A1B0GVH7 501 aa10.36□□□□□ -0.75
VPS13D-204ENST00000469054 FAM183AA6NL82 134 aa10.36□□□□□ -0.75
VPS13D-204ENST00000469054 PRR23D1E9PI22 279 aaPredicted RBP10.36□□□□□ -0.75
VPS13D-204ENST00000469054 ATP6V1G2-DDX39BF2Z307 99 aa10.36□□□□□ -0.75
VPS13D-204ENST00000469054 HS3ST1O14792 307 aa10.36□□□□□ -0.75
VPS13D-204ENST00000469054 GYPBP06028 91 aa10.36□□□□□ -0.75
VPS13D-204ENST00000469054 PRR23D2P0DMB1 279 aaPredicted RBP10.36□□□□□ -0.75
VPS13D-204ENST00000469054 CLUP10909 449 aa10.36□□□□□ -0.75
VPS13D-204ENST00000469054 ZNF35P13682 527 aa10.36□□□□□ -0.75
VPS13D-204ENST00000469054 FMO3P31513 532 aa10.36□□□□□ -0.75
VPS13D-204ENST00000469054 BLVRAP53004 296 aa10.36□□□□□ -0.75
VPS13D-204ENST00000469054 RAD23AP54725 363 aa10.36□□□□□ -0.75
VPS13D-204ENST00000469054 CDH11P55287 796 aa10.36□□□□□ -0.75
VPS13D-204ENST00000469054 SCRN3Q0VDG4 424 aa10.36□□□□□ -0.75
VPS13D-204ENST00000469054 AQP6Q13520 282 aa10.36□□□□□ -0.75
VPS13D-204ENST00000469054 C12orf73Q69YU5 71 aa10.36□□□□□ -0.75
VPS13D-204ENST00000469054 PLBD1Q6P4A8 553 aa10.36□□□□□ -0.75
VPS13D-204ENST00000469054 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.36□□□□□ -0.75
VPS13D-204ENST00000469054 ALDH16A1Q8IZ83 802 aa10.36□□□□□ -0.75
VPS13D-204ENST00000469054 CPEB3Q8NE35 698 aaKnown RBP10.36□□□□□ -0.75
VPS13D-204ENST00000469054 SLC30A7Q8NEW0 376 aa10.36□□□□□ -0.75
VPS13D-204ENST00000469054 OR10H5Q8NGA6 315 aa10.36□□□□□ -0.75
VPS13D-204ENST00000469054 AKR7LQ8NHP1 331 aa10.36□□□□□ -0.75
VPS13D-204ENST00000469054 OTULINQ96BN8 352 aa10.36□□□□□ -0.75
VPS13D-204ENST00000469054 HCAR1Q9BXC0 346 aa10.36□□□□□ -0.75
VPS13D-204ENST00000469054 WNT5BQ9H1J7 359 aa10.36□□□□□ -0.75
VPS13D-204ENST00000469054 OR51V1Q9H2C8 321 aa10.36□□□□□ -0.75
VPS13D-204ENST00000469054 LIME1Q9H400 295 aa10.36□□□□□ -0.75
VPS13D-204ENST00000469054 C1orf198Q9H425 327 aa10.36□□□□□ -0.75
VPS13D-204ENST00000469054 MED20Q9H944 212 aa10.36□□□□□ -0.75
VPS13D-204ENST00000469054 UBTD1Q9HAC8 227 aa10.36□□□□□ -0.75
VPS13D-204ENST00000469054 HINT3Q9NQE9 182 aaKnown RBP10.36□□□□□ -0.75
VPS13D-204ENST00000469054 MRPL22Q9NWU5 206 aaKnown RBP10.36□□□□□ -0.75
VPS13D-204ENST00000469054 CISD1Q9NZ45 108 aaKnown RBP10.36□□□□□ -0.75
VPS13D-204ENST00000469054 ASH2LQ9UBL3 628 aa10.36□□□□□ -0.75
VPS13D-204ENST00000469054 POLR1DQ9Y2S0 133 aa10.36□□□□□ -0.75
VPS13D-204ENST00000469054 E7EQL1 145 aa10.35□□□□□ -0.75
VPS13D-204ENST00000469054 PRKYO43930 277 aa10.35□□□□□ -0.75
VPS13D-204ENST00000469054 ZNF823P16415 610 aa10.35□□□□□ -0.75
VPS13D-204ENST00000469054 APEX1P27695 318 aaKnown RBP10.35□□□□□ -0.75
VPS13D-204ENST00000469054 APLNRP35414 380 aa10.35□□□□□ -0.75
VPS13D-204ENST00000469054 GGT2P36268 569 aa10.35□□□□□ -0.75
VPS13D-204ENST00000469054 EFNB1P98172 346 aa10.35□□□□□ -0.75
VPS13D-204ENST00000469054 TRIP10Q15642 601 aa10.35□□□□□ -0.75
VPS13D-204ENST00000469054 ZIK1Q3SY52 487 aaPredicted RBP10.35□□□□□ -0.75
VPS13D-204ENST00000469054 LINC01590Q5TEZ4 76 aa10.35□□□□□ -0.75
VPS13D-204ENST00000469054 PAMR1Q6UXH9 720 aa10.35□□□□□ -0.75
VPS13D-204ENST00000469054 B3GLCTQ6Y288 498 aa10.35□□□□□ -0.75
VPS13D-204ENST00000469054 C20orf204Q6ZNR8 217 aa10.35□□□□□ -0.75
VPS13D-204ENST00000469054 CXXC5Q7LFL8 322 aaKnown RBP10.35□□□□□ -0.75
VPS13D-204ENST00000469054 CPOQ8IVL8 374 aa10.35□□□□□ -0.75
VPS13D-204ENST00000469054 ZNF611Q8N823 705 aa10.35□□□□□ -0.75
VPS13D-204ENST00000469054 ZNF511Q8NB15 262 aa10.35□□□□□ -0.75
VPS13D-204ENST00000469054 OR4F15Q8NGB8 312 aa10.35□□□□□ -0.75
VPS13D-204ENST00000469054 OR1J2Q8NGS2 313 aa10.35□□□□□ -0.75
VPS13D-204ENST00000469054 OR6K6Q8NGW6 343 aa10.35□□□□□ -0.75
VPS13D-204ENST00000469054 FBXW5Q969U6 566 aa10.35□□□□□ -0.75
VPS13D-204ENST00000469054 CDADC1Q9BWV3 514 aa10.35□□□□□ -0.75
VPS13D-204ENST00000469054 GRIP2Q9C0E4 1043 aa10.35□□□□□ -0.75
VPS13D-204ENST00000469054 DCLRE1BQ9H816 532 aa10.35□□□□□ -0.75
VPS13D-204ENST00000469054 PLEK2Q9NYT0 353 aa10.35□□□□□ -0.75
VPS13D-204ENST00000469054 KCNG2Q9UJ96 466 aa10.35□□□□□ -0.75
VPS13D-204ENST00000469054 EDARQ9UNE0 448 aa10.35□□□□□ -0.75
VPS13D-204ENST00000469054 ATP23Q9Y6H3 246 aa10.35□□□□□ -0.75
VPS13D-204ENST00000469054 CACNA1DQ01668 2161 aa10.35□□□□□ -0.75
VPS13D-204ENST00000469054 UNC79Q9P2D8 2635 aa10.35□□□□□ -0.75
VPS13D-204ENST00000469054 TVP23AA6NH52 213 aa10.34□□□□□ -0.75
VPS13D-204ENST00000469054 RER1O15258 196 aa10.34□□□□□ -0.75
VPS13D-204ENST00000469054 SGCEO43556 437 aa10.34□□□□□ -0.75
VPS13D-204ENST00000469054 TLX2O43763 284 aaPredicted RBP10.34□□□□□ -0.75
VPS13D-204ENST00000469054 GLCEO94923 617 aa10.34□□□□□ -0.75
VPS13D-204ENST00000469054 COX5BP10606 129 aa10.34□□□□□ -0.75
VPS13D-204ENST00000469054 CCL2P13500 99 aa10.34□□□□□ -0.75
VPS13D-204ENST00000469054 STOMP27105 288 aa10.34□□□□□ -0.75
VPS13D-204ENST00000469054 GDI2P50395 445 aaKnown RBP10.34□□□□□ -0.75
VPS13D-204ENST00000469054 ADAM8P78325 824 aa10.34□□□□□ -0.75
VPS13D-204ENST00000469054 HGFACQ04756 655 aa10.34□□□□□ -0.75
VPS13D-204ENST00000469054 KEAP1Q14145 624 aa10.34□□□□□ -0.75
VPS13D-204ENST00000469054 TBC1D28Q2M2D7 210 aa10.34□□□□□ -0.75
VPS13D-204ENST00000469054 KLHL12Q53G59 568 aa10.34□□□□□ -0.75
VPS13D-204ENST00000469054 CCDC92Q53HC0 331 aaPredicted RBP10.34□□□□□ -0.75
VPS13D-204ENST00000469054 LPCAT4Q643R3 524 aa10.34□□□□□ -0.75
VPS13D-204ENST00000469054 ZNF774Q6NX45 483 aa10.34□□□□□ -0.75
VPS13D-204ENST00000469054 CORO6Q6QEF8 472 aa10.34□□□□□ -0.75
VPS13D-204ENST00000469054 LYPD4Q6UWN0 246 aa10.34□□□□□ -0.75
VPS13D-204ENST00000469054 ZNF771Q7L3S4 317 aaPredicted RBP10.34□□□□□ -0.75
VPS13D-204ENST00000469054 TCEANCQ8N8B7 351 aa10.34□□□□□ -0.75
VPS13D-204ENST00000469054 NUP37Q8NFH4 326 aa10.34□□□□□ -0.75
VPS13D-204ENST00000469054 BBS1Q8NFJ9 593 aa10.34□□□□□ -0.75
VPS13D-204ENST00000469054 GJC3Q8NFK1 279 aa10.34□□□□□ -0.75
VPS13D-204ENST00000469054 SMAP2Q8WU79 429 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms