RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 ZCCHC4Q9H5U6 513 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 PPP1R3CQ9UQK1 317 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 MYO5AQ9Y4I1 1855 aaKnown RBP7.97□□□□□ -1.13
HPS4-209ENST00000466781 TNFRSF10CO14798 259 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 HTR1FP30939 366 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 GDNFP39905 211 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 TFAP2EQ6VUC0 442 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 OR2L13Q8N349 312 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 OR10G3Q8NGC4 313 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 OR10AD1Q8NGE0 317 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 M1APQ8TC57 530 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 C5orf49A4QMS7 147 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 ANGPTL7O43827 346 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 TGM1P22735 817 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 MAGEB1P43366 347 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 MTNR1BP49286 362 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 ERHP84090 104 aaKnown RBP7.97□□□□□ -1.13
HPS4-209ENST00000466781 TBCEQ15813 527 aaPredicted RBP7.97□□□□□ -1.13
HPS4-209ENST00000466781 PRTGQ2VWP7 1150 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 CPEB2Q7Z5Q1 589 aaKnown RBP7.97□□□□□ -1.13
HPS4-209ENST00000466781 ETFBKMTQ8IXQ9 262 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 PLPP6Q8IY26 295 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 ADGRF3Q8IZF5 1079 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 C3orf30Q96M34 536 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 SOX7Q9BT81 388 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 ZNF331Q9NQX6 463 aaPredicted RBP7.97□□□□□ -1.13
HPS4-209ENST00000466781 OR51B4Q9Y5P0 310 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 ATAD5Q96QE3 1844 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 ZNF816-ZNF321PA0A0X1KG74 233 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 MEIOCA2RUB1 952 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 PAPLNO95428 1278 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 KLKB1P03952 638 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 CTXN2P0C2S0 81 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 SRP9P49458 86 aaKnown RBP7.97□□□□□ -1.13
HPS4-209ENST00000466781 ELLP55199 621 aaPredicted RBP7.97□□□□□ -1.13
HPS4-209ENST00000466781 BPIFB3P59826 476 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 ADIRFQ15847 76 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 ZNF750Q32MQ0 723 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 PHYHD1Q5SRE7 291 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 FAM122CQ6P4D5 195 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 ANKRD16Q6P6B7 361 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 SLCO4C1Q6ZQN7 724 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 ZNF321PQ8N8H1 164 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 SLC37A2Q8TED4 501 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 GHSRQ92847 366 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 ZNF486Q96H40 463 aaPredicted RBP7.97□□□□□ -1.13
HPS4-209ENST00000466781 EGLN2Q96KS0 407 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 CCDC74BQ96LY2 380 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 GPR55Q9Y2T6 319 aaPredicted RBP7.97□□□□□ -1.13
HPS4-209ENST00000466781 MYH15Q9Y2K3 1946 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 TNFSF11O14788 317 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 GALR2O43603 387 aaPredicted RBP7.97□□□□□ -1.13
HPS4-209ENST00000466781 PIPP12273 146 aaPredicted RBP7.97□□□□□ -1.13
HPS4-209ENST00000466781 IL9P15248 144 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 CNR1P21554 472 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 IVDP26440 423 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 HSF1Q00613 529 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 SFXN4Q6P4A7 337 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 SSX9Q7RTT3 188 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 LSMEM2Q8N112 164 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.97□□□□□ -1.13
HPS4-209ENST00000466781 L3MBTL4Q8NA19 623 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 DEFB108BQ8NET1 73 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 ZFP90Q8TF47 636 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 FCRL1Q96LA6 429 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 S1PR3Q99500 378 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 SOD1P00441 154 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 CD14P08571 375 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 APEHP13798 732 aaKnown RBP7.97□□□□□ -1.13
HPS4-209ENST00000466781 CSNK1G2P78368 415 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 EMX1Q04741 257 aaPredicted RBP7.97□□□□□ -1.13
HPS4-209ENST00000466781 ASTLQ6HA08 431 aaPredicted RBP7.97□□□□□ -1.13
HPS4-209ENST00000466781 STEAP1BQ6NZ63 245 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 PARP16Q8N5Y8 322 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 WBP2Q969T9 261 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 PINX1Q96BK5 328 aaKnown RBP7.97□□□□□ -1.13
HPS4-209ENST00000466781 REEP6Q96HR9 211 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 AMBRA1Q9C0C7 1298 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 OR11A1Q9GZK7 315 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 TINAGL1Q9GZM7 467 aaPredicted RBP7.97□□□□□ -1.13
HPS4-209ENST00000466781 CXorf36Q9H7Y0 433 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 ONECUT1Q9UBC0 465 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 OSGIN1Q9UJX0 560 aa7.97□□□□□ -1.13
HPS4-209ENST00000466781 XKRY2A2RUG3 117 aa7.96□□□□□ -1.13
HPS4-209ENST00000466781 M0QYG6 137 aa7.96□□□□□ -1.13
HPS4-209ENST00000466781 TBXA2RP21731 343 aa7.96□□□□□ -1.13
HPS4-209ENST00000466781 ACKR3P25106 362 aa7.96□□□□□ -1.13
HPS4-209ENST00000466781 RBP2P50120 134 aa7.96□□□□□ -1.13
HPS4-209ENST00000466781 TAS2R45P59539 299 aa7.96□□□□□ -1.13
HPS4-209ENST00000466781 LYPD8Q6UX82 237 aa7.96□□□□□ -1.13
HPS4-209ENST00000466781 FAM58AQ8N1B3 248 aa7.96□□□□□ -1.13
HPS4-209ENST00000466781 PFN4Q8NHR9 129 aa7.96□□□□□ -1.13
HPS4-209ENST00000466781 NRSN2Q9GZP1 204 aa7.96□□□□□ -1.13
HPS4-209ENST00000466781 SLC22A11Q9NSA0 550 aa7.96□□□□□ -1.13
HPS4-209ENST00000466781 CHRNA9Q9UGM1 479 aa7.96□□□□□ -1.13
HPS4-209ENST00000466781 KLK4Q9Y5K2 254 aa7.96□□□□□ -1.13
HPS4-209ENST00000466781 ARHGAP33O14559 1287 aa7.96□□□□□ -1.13
HPS4-209ENST00000466781 CRYABP02511 175 aaKnown RBP7.96□□□□□ -1.13
HPS4-209ENST00000466781 SMIM17P0DL12 118 aa7.96□□□□□ -1.13
HPS4-209ENST00000466781 TACR1P25103 407 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms