RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 PTBP1P26599 531 aaKnown RBP eCLIP12.07□□□□□ -0.48
UBE4B-206ENST00000466379 PITPNBP48739 271 aa12.07□□□□□ -0.48
UBE4B-206ENST00000466379 CLDN17P56750 224 aa12.07□□□□□ -0.48
UBE4B-206ENST00000466379 HSPB2Q16082 182 aa12.07□□□□□ -0.48
UBE4B-206ENST00000466379 H3F3CQ6NXT2 135 aa12.07□□□□□ -0.48
UBE4B-206ENST00000466379 FDX2Q6P4F2 183 aa12.07□□□□□ -0.48
UBE4B-206ENST00000466379 LRRTM1Q86UE6 522 aa12.07□□□□□ -0.48
UBE4B-206ENST00000466379 OR10H5Q8NGA6 315 aa12.07□□□□□ -0.48
UBE4B-206ENST00000466379 SLC25A44Q96H78 314 aaPredicted RBP12.07□□□□□ -0.48
UBE4B-206ENST00000466379 NKX3-1Q99801 234 aaPredicted RBP12.07□□□□□ -0.48
UBE4B-206ENST00000466379 WACQ9BTA9 647 aa12.07□□□□□ -0.48
UBE4B-206ENST00000466379 MFRPQ9BY79 579 aa12.07□□□□□ -0.48
UBE4B-206ENST00000466379 MRPS7Q9Y2R9 242 aaKnown RBP12.07□□□□□ -0.48
UBE4B-206ENST00000466379 CNTRLQ7Z7A1 2325 aa12.07□□□□□ -0.48
UBE4B-206ENST00000466379 TRBV5-7A0A0A0MS05 114 aa12.06□□□□□ -0.48
UBE4B-206ENST00000466379 PINLYPA6NC86 204 aa12.06□□□□□ -0.48
UBE4B-206ENST00000466379 GPR171O14626 319 aa12.06□□□□□ -0.48
UBE4B-206ENST00000466379 EEF1E1O43324 174 aaKnown RBP12.06□□□□□ -0.48
UBE4B-206ENST00000466379 PMS2P2O95744 297 aa12.06□□□□□ -0.48
UBE4B-206ENST00000466379 HLA-DQB1P01920 261 aa12.06□□□□□ -0.48
UBE4B-206ENST00000466379 MAPK3P27361 379 aaPredicted RBP12.06□□□□□ -0.48
UBE4B-206ENST00000466379 KIR2DL3P43628 341 aa12.06□□□□□ -0.48
UBE4B-206ENST00000466379 INPP1P49441 399 aa12.06□□□□□ -0.48
UBE4B-206ENST00000466379 ZNF57Q68EA5 555 aaPredicted RBP12.06□□□□□ -0.48
UBE4B-206ENST00000466379 SPINK14Q6IE38 97 aa12.06□□□□□ -0.48
UBE4B-206ENST00000466379 ASB18Q6ZVZ8 466 aa12.06□□□□□ -0.48
UBE4B-206ENST00000466379 CATSPERDQ86XM0 798 aa12.06□□□□□ -0.48
UBE4B-206ENST00000466379 SLITRK2Q9H156 845 aa12.06□□□□□ -0.48
UBE4B-206ENST00000466379 PARD6AQ9NPB6 346 aa12.06□□□□□ -0.48
UBE4B-206ENST00000466379 IL17BQ9UHF5 180 aa12.06□□□□□ -0.48
UBE4B-206ENST00000466379 SPATA2Q9UM82 520 aa12.06□□□□□ -0.48
UBE4B-206ENST00000466379 A0A0J9YW62 118 aa12.06□□□□□ -0.48
UBE4B-206ENST00000466379 LRRC3CA6NJW4 275 aa12.06□□□□□ -0.48
UBE4B-206ENST00000466379 AIPO00170 330 aa12.06□□□□□ -0.48
UBE4B-206ENST00000466379 TERTO14746 1132 aaKnown RBP12.06□□□□□ -0.48
UBE4B-206ENST00000466379 SRSF10O75494 262 aaKnown RBP12.06□□□□□ -0.48
UBE4B-206ENST00000466379 LAP3P28838 519 aa12.06□□□□□ -0.48
UBE4B-206ENST00000466379 PCK2Q16822 640 aa12.06□□□□□ -0.48
UBE4B-206ENST00000466379 THEM4Q5T1C6 240 aa12.06□□□□□ -0.48
UBE4B-206ENST00000466379 LRFN4Q6PJG9 635 aa12.06□□□□□ -0.48
UBE4B-206ENST00000466379 FCRLAQ7L513 359 aa12.06□□□□□ -0.48
UBE4B-206ENST00000466379 OR6X1Q8NH79 312 aa12.06□□□□□ -0.48
UBE4B-206ENST00000466379 OR14L1PQ8NHC6 308 aa12.06□□□□□ -0.48
UBE4B-206ENST00000466379 MCHR2Q969V1 340 aa12.06□□□□□ -0.48
UBE4B-206ENST00000466379 KCNJ15Q99712 375 aa12.06□□□□□ -0.48
UBE4B-206ENST00000466379 SRXN1Q9BYN0 137 aa12.06□□□□□ -0.48
UBE4B-206ENST00000466379 LIN7BQ9HAP6 207 aa12.06□□□□□ -0.48
UBE4B-206ENST00000466379 STMN3Q9NZ72 180 aa12.06□□□□□ -0.48
UBE4B-206ENST00000466379 PCDHGA9Q9Y5G4 932 aaKnown RBP12.06□□□□□ -0.48
UBE4B-206ENST00000466379 ZNF726A6NNF4 738 aa12.05□□□□□ -0.48
UBE4B-206ENST00000466379 AQP8O94778 261 aa12.05□□□□□ -0.48
UBE4B-206ENST00000466379 ZNF432O94892 652 aa12.05□□□□□ -0.48
UBE4B-206ENST00000466379 QDPRP09417 244 aa12.05□□□□□ -0.48
UBE4B-206ENST00000466379 MAP2K3P46734 347 aa12.05□□□□□ -0.48
UBE4B-206ENST00000466379 CYB561P49447 251 aa12.05□□□□□ -0.48
UBE4B-206ENST00000466379 CCR9P51686 369 aa12.05□□□□□ -0.48
UBE4B-206ENST00000466379 CLDN20P56880 219 aa12.05□□□□□ -0.48
UBE4B-206ENST00000466379 B3GALT5-AS1P59052 145 aa12.05□□□□□ -0.48
UBE4B-206ENST00000466379 TRIP6Q15654 476 aaKnown RBP12.05□□□□□ -0.48
UBE4B-206ENST00000466379 MTFR2Q6P444 385 aa12.05□□□□□ -0.48
UBE4B-206ENST00000466379 TMPRSS12Q86WS5 348 aa12.05□□□□□ -0.48
UBE4B-206ENST00000466379 SERPINA12Q8IW75 414 aa12.05□□□□□ -0.48
UBE4B-206ENST00000466379 CMTM4Q8IZR5 234 aa12.05□□□□□ -0.48
UBE4B-206ENST00000466379 ZFP3Q96NJ6 502 aa12.05□□□□□ -0.48
UBE4B-206ENST00000466379 THAP7Q9BT49 309 aaPredicted RBP12.05□□□□□ -0.48
UBE4B-206ENST00000466379 KLHL9Q9P2J3 617 aa12.05□□□□□ -0.48
UBE4B-206ENST00000466379 R4GMQ9 66 aa12.05□□□□□ -0.48
UBE4B-206ENST00000466379 CELSR3Q9NYQ7 3312 aa12.05□□□□□ -0.48
UBE4B-206ENST00000466379 CACNA1HO95180 2353 aa12.05□□□□□ -0.48
UBE4B-206ENST00000466379 TRAPPC6AO75865 159 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 H2BFMP0C1H6 154 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 ENPP1P22413 925 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 FKBP2P26885 142 aaKnown RBP12.04□□□□□ -0.48
UBE4B-206ENST00000466379 TPTEP56180 551 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 H3F3AP84243 136 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 EIF3IQ13347 325 aaKnown RBP12.04□□□□□ -0.48
UBE4B-206ENST00000466379 ZNF239Q16600 458 aaKnown RBP12.04□□□□□ -0.48
UBE4B-206ENST00000466379 ASPHD2Q6ICH7 369 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 SLC25A47Q6Q0C1 308 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 CFAP77Q6ZQR2 320 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 RAB43Q86YS6 212 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 UBQLNLQ8IYU4 475 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 OR10S1Q8NGN2 331 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 ENKURQ8TC29 256 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 RFT1Q96AA3 541 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 SLAMF6Q96DU3 332 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 SLC25A38Q96DW6 304 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 ZNF385AQ96PM9 386 aaKnown RBP12.04□□□□□ -0.48
UBE4B-206ENST00000466379 PIGQQ9BRB3 760 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 G6PC2Q9NQR9 355 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 OR5V1Q9UGF6 321 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 CYB5R1Q9UHQ9 305 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 PHF3Q92576 2039 aaKnown RBP12.04□□□□□ -0.48
UBE4B-206ENST00000466379 KNTC1P50748 2209 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 ANXA2P2A6NMY6 339 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 C21orf140B9A014 251 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 LYRM1O43325 122 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 LMX1BO60663 402 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 HRGP04196 525 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 ANXA2P07355 339 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms