RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 STPG1Q5TH74 334 aa16.27■□□□□ 0.2
COL9A3-205ENST00000466192 OR7E24Q6IFN5 339 aa16.27■□□□□ 0.2
COL9A3-205ENST00000466192 STAC2Q6ZMT1 411 aa16.27■□□□□ 0.2
COL9A3-205ENST00000466192 C4orf45Q96LM5 186 aa16.27■□□□□ 0.2
COL9A3-205ENST00000466192 STMN3Q9NZ72 180 aa16.27■□□□□ 0.2
COL9A3-205ENST00000466192 TRBV5-5A0A0J9YX44 114 aa16.27■□□□□ 0.19
COL9A3-205ENST00000466192 HSPB2A8KAH6 182 aa16.27■□□□□ 0.19
COL9A3-205ENST00000466192 LYRM1O43325 122 aa16.27■□□□□ 0.19
COL9A3-205ENST00000466192 SLC43A1O75387 559 aa16.27■□□□□ 0.19
COL9A3-205ENST00000466192 PNPP00491 289 aa16.27■□□□□ 0.19
COL9A3-205ENST00000466192 PGA4P0DJD7 388 aa16.27■□□□□ 0.19
COL9A3-205ENST00000466192 PGA3P0DJD8 388 aa16.27■□□□□ 0.19
COL9A3-205ENST00000466192 PRKAR1AP10644 381 aa16.27■□□□□ 0.19
COL9A3-205ENST00000466192 GPR85P60893 370 aa16.27■□□□□ 0.19
COL9A3-205ENST00000466192 OC90Q02509 493 aaPredicted RBP16.27■□□□□ 0.19
COL9A3-205ENST00000466192 HSPB2Q16082 182 aa16.27■□□□□ 0.19
COL9A3-205ENST00000466192 KCTD18Q6PI47 426 aaPredicted RBP16.27■□□□□ 0.19
COL9A3-205ENST00000466192 GLCCI1Q86VQ1 547 aa16.27■□□□□ 0.19
COL9A3-205ENST00000466192 CHAC2Q8WUX2 184 aa16.27■□□□□ 0.19
COL9A3-205ENST00000466192 TMEM106AQ96A25 262 aa16.27■□□□□ 0.19
COL9A3-205ENST00000466192 SLC25A44Q96H78 314 aaPredicted RBP16.27■□□□□ 0.19
COL9A3-205ENST00000466192 THAP7Q9BT49 309 aaPredicted RBP16.27■□□□□ 0.19
COL9A3-205ENST00000466192 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.27■□□□□ 0.19
COL9A3-205ENST00000466192 MOV10Q9HCE1 1003 aaKnown RBP16.27■□□□□ 0.19
COL9A3-205ENST00000466192 MRPS7Q9Y2R9 242 aaKnown RBP16.27■□□□□ 0.19
COL9A3-205ENST00000466192 V9GY05 133 aa16.27■□□□□ 0.19
COL9A3-205ENST00000466192 LRRC3CA6NJW4 275 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 AIPO00170 330 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 ZNF254O75437 659 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 RFPL3SP0C7P2 107 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 ZNF823P16415 610 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 ZNF43P17038 809 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 RCVRNP35243 200 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 CLDN12P56749 244 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 B3GALT5-AS1P59052 145 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 PCK2Q16822 640 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 DCAF10Q5QP82 559 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 ASB18Q6ZVZ8 466 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 ZNF454Q8N9F8 522 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 GPR148Q8TDV2 347 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 RNF128Q8TEB7 428 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 PPP1R14AQ96A00 147 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 RBP7Q96R05 134 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 PIGQQ9BRB3 760 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 SLITRK2Q9H156 845 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 RBFOX1Q9NWB1 397 aaKnown RBP16.26■□□□□ 0.19
COL9A3-205ENST00000466192 SLC22A13Q9Y226 551 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 LOC102725191A0A1B0GVB3 256 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 SPAARA0A1B0GVQ0 90 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 MEIOCA2RUB1 952 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 PRR33A8MZF0 331 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 EEF1E1O43324 174 aaKnown RBP16.26■□□□□ 0.19
COL9A3-205ENST00000466192 SRD5A2P31213 254 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 TCF15Q12870 199 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 TEX30Q5JUR7 227 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 PYHIN1Q6K0P9 492 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 MZT2BQ6NZ67 158 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 FDX2Q6P4F2 183 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 YRDCQ86U90 279 aaKnown RBP16.26■□□□□ 0.19
COL9A3-205ENST00000466192 LINC00346Q8IVM7 164 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 NOXO1Q8NFA2 376 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 OR52N5Q8NH56 324 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 NKD1Q969G9 470 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 RFT1Q96AA3 541 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 LIN7BQ9HAP6 207 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 LRP12Q9Y561 859 aa16.26■□□□□ 0.19
COL9A3-205ENST00000466192 ZNF432O94892 652 aa16.25■□□□□ 0.19
COL9A3-205ENST00000466192 IGHG1P01857 330 aa16.25■□□□□ 0.19
COL9A3-205ENST00000466192 ADRA2CP18825 462 aa16.25■□□□□ 0.19
COL9A3-205ENST00000466192 RIDAP52758 137 aaKnown RBP16.25■□□□□ 0.19
COL9A3-205ENST00000466192 CLRN1P58418 232 aa16.25■□□□□ 0.19
COL9A3-205ENST00000466192 RAC1P63000 192 aa16.25■□□□□ 0.19
COL9A3-205ENST00000466192 THEM4Q5T1C6 240 aa16.25■□□□□ 0.19
COL9A3-205ENST00000466192 SPINK14Q6IE38 97 aa16.25■□□□□ 0.19
COL9A3-205ENST00000466192 JMJD6Q6NYC1 403 aaPredicted RBP16.25■□□□□ 0.19
COL9A3-205ENST00000466192 GLB1L2Q8IW92 636 aa16.25■□□□□ 0.19
COL9A3-205ENST00000466192 DNAAF1Q8NEP3 725 aa16.25■□□□□ 0.19
COL9A3-205ENST00000466192 OR6X1Q8NH79 312 aa16.25■□□□□ 0.19
COL9A3-205ENST00000466192 ST7LQ8TDW4 575 aa16.25■□□□□ 0.19
COL9A3-205ENST00000466192 ZFP3Q96NJ6 502 aa16.25■□□□□ 0.19
COL9A3-205ENST00000466192 KLHL9Q9P2J3 617 aa16.25■□□□□ 0.19
COL9A3-205ENST00000466192 TRAV8-7A0A075B6U6 113 aa16.24■□□□□ 0.19
COL9A3-205ENST00000466192 A0A0J9YW62 118 aa16.24■□□□□ 0.19
COL9A3-205ENST00000466192 FAM240BA0A1B0GVZ2 78 aa16.24■□□□□ 0.19
COL9A3-205ENST00000466192 PINLYPA6NC86 204 aa16.24■□□□□ 0.19
COL9A3-205ENST00000466192 HRGP04196 525 aa16.24■□□□□ 0.19
COL9A3-205ENST00000466192 MAS1P04201 325 aa16.24■□□□□ 0.19
COL9A3-205ENST00000466192 FTH1P19P0C7X4 201 aa16.24■□□□□ 0.19
COL9A3-205ENST00000466192 CD96P40200 585 aa16.24■□□□□ 0.19
COL9A3-205ENST00000466192 MFGE8Q08431 387 aaPredicted RBP16.24■□□□□ 0.19
COL9A3-205ENST00000466192 CARD17Q5XLA6 110 aa16.24■□□□□ 0.19
COL9A3-205ENST00000466192 PLET1Q6UQ28 207 aa16.24■□□□□ 0.19
COL9A3-205ENST00000466192 DCXRQ7Z4W1 244 aa16.24■□□□□ 0.19
COL9A3-205ENST00000466192 TSEN15Q8WW01 171 aaKnown RBP16.24■□□□□ 0.19
COL9A3-205ENST00000466192 TRIM63Q969Q1 353 aa16.24■□□□□ 0.19
COL9A3-205ENST00000466192 RNF121Q9H920 327 aa16.24■□□□□ 0.19
COL9A3-205ENST00000466192 LRFN1Q9P244 771 aa16.24■□□□□ 0.19
COL9A3-205ENST00000466192 NLKQ9UBE8 527 aa16.24■□□□□ 0.19
COL9A3-205ENST00000466192 PCDHGA9Q9Y5G4 932 aaKnown RBP16.24■□□□□ 0.19
COL9A3-205ENST00000466192 ZNF292O60281 2723 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms