RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 ZIC4Q8N9L1 334 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 POMGNT2Q8NAT1 580 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 LSM14AQ8ND56 463 aaKnown RBP4.85□□□□□ -1.63
VPS41-211ENST00000466017 OR52I1Q8NGK6 324 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 HAVCR2Q8TDQ0 301 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 TMEM54Q969K7 222 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 LGALS12Q96DT0 336 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 BOD1Q96IK1 185 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 TXNDC15Q96J42 360 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 GPR137Q96N19 417 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 TSPAN32Q96QS1 320 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 TAAR6Q96RI8 345 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 NMNAT3Q96T66 252 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 COPS4Q9BT78 406 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 SRXN1Q9BYN0 137 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 LINC00470Q9BZP3 86 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 YIPF3Q9GZM5 350 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 DEFB127Q9H1M4 99 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 NELFAQ9H3P2 528 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 LDAHQ9H6V9 325 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 CALHM2Q9HA72 323 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 VCX3AQ9NNX9 186 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 ACOT13Q9NPJ3 140 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 PARPBPQ9NWS1 579 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 NPIPA1Q9UND3 350 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 CAB39Q9Y376 341 aaPredicted RBP4.85□□□□□ -1.63
VPS41-211ENST00000466017 ADAM18Q9Y3Q7 739 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 SNX5Q9Y5X3 404 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 FLVCR1Q9Y5Y0 555 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 NCKAP5O14513 1909 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 ALPK2Q86TB3 2170 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 PIEZO1Q92508 2521 aa4.85□□□□□ -1.63
VPS41-211ENST00000466017 IGLV1-36A0A0B4J1U3 117 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 SMIM31A0A1B0GVY4 71 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 TMEM129A0AVI4 362 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 CD8B2A6NJW9 211 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 FAM183AA6NL82 134 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 FAM166BA8MTA8 275 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 ZNF99A8MXY4 864 aaPredicted RBP4.84□□□□□ -1.63
VPS41-211ENST00000466017 ZNF814B7Z6K7 855 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 C11orf98E9PRG8 122 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 RPL36A-HNRNPH2H7BZ11 118 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 K7EM74 188 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 PHYHO14832 338 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 TFECO14948 347 aaPredicted RBP4.84□□□□□ -1.63
VPS41-211ENST00000466017 TMEM127O75204 238 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 KHDRBS3O75525 346 aaKnown RBP4.84□□□□□ -1.63
VPS41-211ENST00000466017 IGHG1P01857 330 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 CD1AP06126 327 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 CRHP06850 196 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 FCGR2AP12318 317 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 CD53P19397 219 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 EEF1B2P24534 225 aaKnown RBP4.84□□□□□ -1.63
VPS41-211ENST00000466017 C21orf33P30042 268 aaPredicted RBP4.84□□□□□ -1.63
VPS41-211ENST00000466017 CDH15P55291 814 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 BIDP55957 195 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 LGALS4P56470 323 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 ACTC1P68032 377 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 ACTA1P68133 377 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 CXADRP78310 365 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 BDH1Q02338 343 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 RASGEF1BQ0VAM2 473 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 MRPL28Q13084 256 aaKnown RBP4.84□□□□□ -1.63
VPS41-211ENST00000466017 C10orf128Q5T292 105 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 C1QTNF12Q5T7M4 302 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 XAF1Q6GPH4 301 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 DEGS2Q6QHC5 323 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 C19orf48Q6RUI8 117 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 KCTD8Q6ZWB6 473 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 FCRLAQ7L513 359 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 ZNF627Q7L945 461 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 CHMP1BQ7LBR1 199 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 SHFQ7M4L6 423 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 SLC16A9Q7RTY1 509 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 KCTD20Q7Z5Y7 419 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 IGFN1Q86VF2 1251 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 TIGD4Q8IY51 512 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 C20orf196Q8IYI0 205 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 CMTM4Q8IZR5 234 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 GHDCQ8N2G8 530 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 SYS1Q8N2H4 156 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 KDM8Q8N371 416 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 ZNF485Q8NCK3 441 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 SDR9C7Q8NEX9 313 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 OR9K2Q8NGE7 335 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 OR52N1Q8NH53 320 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 RNF128Q8TEB7 428 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 FAR1Q8WVX9 515 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 RASD2Q96D21 266 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 RNFT2Q96EX2 444 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 MRPL48Q96GC5 212 aaKnown RBP4.84□□□□□ -1.63
VPS41-211ENST00000466017 BCL7BQ9BQE9 202 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 HCAR1Q9BXC0 346 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 FAM192AQ9GZU8 254 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 NUAK2Q9H093 628 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 OR51V1Q9H2C8 321 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 TMEM185BQ9H7F4 350 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 ADGRL4Q9HBW9 690 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 AMBNQ9NP70 447 aa4.84□□□□□ -1.63
VPS41-211ENST00000466017 ASB6Q9NWX5 421 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms