RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	ASF1B	Q9NVP2	202 aa		4.24	□□□□□ -1.73
CACNA1C-223	ENST00000465278	TREM2	Q9NZC2	230 aa		4.24	□□□□□ -1.73
CACNA1C-223	ENST00000465278	GLTP	Q9NZD2	209 aa		4.24	□□□□□ -1.73
CACNA1C-223	ENST00000465278	PEF1	Q9UBV8	284 aa	Known RBP	4.24	□□□□□ -1.73
CACNA1C-223	ENST00000465278	COPS3	Q9UNS2	423 aa		4.24	□□□□□ -1.73
CACNA1C-223	ENST00000465278	LIPT1	Q9Y234	373 aa		4.24	□□□□□ -1.73
CACNA1C-223	ENST00000465278	DHRS7	Q9Y394	339 aa		4.24	□□□□□ -1.73
CACNA1C-223	ENST00000465278		U3KQA8	63 aa		4.24	□□□□□ -1.73
CACNA1C-223	ENST00000465278	COL7A1	Q02388	2944 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	CXorf51A	A0A1B0GTR3	108 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278		A0A1B0GUH1	482 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	ZNF840P	A6NDX5	716 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	TLCD2	A6NGC4	264 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278		A6NIZ1	184 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	ZNF716	A6NP11	495 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278		H0YAE9	185 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	PHYH	O14832	338 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	NUPL2	O15504	423 aa	Known RBP	4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	ST8SIA3	O43173	380 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	DPM1	O60762	260 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	KHDRBS3	O75525	346 aa	Known RBP	4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	FGF19	O95750	216 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	RLN1	P04808	185 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	APOD	P05090	189 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	ABHD2	P08910	425 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	CD3G	P09693	182 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	CTXN2	P0C2S0	81 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	ZNF735	P0CB33	412 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	UQCRB	P14927	111 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	ETS2	P15036	469 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	GOT1	P17174	413 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	TNNI3	P19429	210 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	LAP3	P28838	519 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	PPP2R1B	P30154	601 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	OTX1	P32242	354 aa	Predicted RBP	4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	TAGLN2	P37802	199 aa	Known RBP	4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	CAMLG	P49069	296 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	PAX9	P55771	341 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	XG	P55808	180 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	CLDN8	P56748	225 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	OR2B6	P58173	313 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	KCNJ2	P63252	427 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	APOF	Q13790	326 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	KCNJ11	Q14654	390 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	ZNF74	Q16587	644 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	CDO1	Q16878	200 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	TYSND1	Q2T9J0	566 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	ZFP69	Q49AA0	526 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	ARMCX4	Q5H9R4	360 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	NHSL2	Q5HYW2	709 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	GPR107	Q5VW38	600 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	OR4C11	Q6IEV9	310 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	FAM199X	Q6PEV8	388 aa	Predicted RBP	4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	FAM92B	Q6ZTR7	304 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	DPPA2	Q7Z7J5	298 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	CCDC71	Q8IV32	467 aa	Predicted RBP	4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	MISP	Q8IVT2	679 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	CMTM8	Q8IZV2	173 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	SPAG16	Q8N0X2	631 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	UMODL1-AS1	Q8N2C9	162 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	NHLRC2	Q8NBF2	726 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	ADAD2	Q8NCV1	583 aa	Known RBP	4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	OR5AP2	Q8NGF4	316 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	OR2L8	Q8NGY9	312 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	OR10J5	Q8NHC4	309 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	MR1	Q95460	341 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	PSMG2	Q969U7	264 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	ZNF514	Q96K75	400 aa	Predicted RBP	4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	ZNF317	Q96PQ6	595 aa	Predicted RBP	4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	FMO2	Q99518	471 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	DOK1	Q99704	481 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	MAPKAP1	Q9BPZ7	522 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	ECSIT	Q9BQ95	431 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	TMEM121	Q9BTD3	319 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	MND1	Q9BWT6	205 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	CLEC7A	Q9BXN2	247 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	MRPL13	Q9BYD1	178 aa	Known RBP	4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	POTEKP	Q9BYX7	375 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	PITPNM3	Q9BZ71	974 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	FOLH1B	Q9HBA9	442 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	TMBIM4	Q9HC24	238 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	SAR1A	Q9NR31	198 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	TREX1	Q9NSU2	369 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	GPATCH2L	Q9NWQ4	482 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	DDIT4	Q9NX09	232 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	DUS2	Q9NX74	493 aa	Known RBP	4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	PLEK2	Q9NYT0	353 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	WARS2	Q9UGM6	360 aa	Known RBP	4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	ZNF229	Q9UJW7	825 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	MGAT4A	Q9UM21	535 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	PSMD13	Q9UNM6	376 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	SNX24	Q9Y343	169 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	AP4S1	Q9Y587	144 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	CLCA3P	Q9Y6N3	262 aa		4.23	□□□□□ -1.73
CACNA1C-223	ENST00000465278	CMYA5	Q8N3K9	4069 aa		4.22	□□□□□ -1.73
CACNA1C-223	ENST00000465278	SEC16A	O15027	2179 aa		4.22	□□□□□ -1.73
CACNA1C-223	ENST00000465278		A0A0U1RQS6	177 aa		4.22	□□□□□ -1.73
CACNA1C-223	ENST00000465278	C2orf92	A0A1B0GVN3	265 aa		4.22	□□□□□ -1.73
CACNA1C-223	ENST00000465278	CENPX	A8MT69	81 aa		4.22	□□□□□ -1.73
CACNA1C-223	ENST00000465278	TMEM150C	B9EJG8	249 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms