RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 VIPR2P41587 438 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 SLC6A9P48067 706 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 NPBWR1P48145 328 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 CX3CR1P49238 355 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 ADAM8P78325 824 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 ROM1Q03395 351 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 RPL18Q07020 188 aaKnown RBP6.57□□□□□ -1.36
USP48-206ENST00000464577 KCNAB1Q14722 419 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 PLEKHN1Q494U1 663 aaPredicted RBP6.57□□□□□ -1.36
USP48-206ENST00000464577 SCGB2B2Q4G0G5 96 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 PRRT3Q5FWE3 981 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 RNASE10Q5GAN6 216 aaKnown RBP6.57□□□□□ -1.36
USP48-206ENST00000464577 C1orf100Q5SVJ3 147 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 AWAT2Q6E213 333 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 TMEM71Q6P5X7 295 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 VITQ6UXI7 678 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 ZNF679Q8IYX0 411 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 C10orf53Q8N6V4 93 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 BOLLQ8N9W6 283 aaKnown RBP6.57□□□□□ -1.36
USP48-206ENST00000464577 OR4A4PQ8NGN8 299 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 FAM174AQ8TBP5 190 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 PAQR8Q8TEZ7 354 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 AQP3Q92482 292 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 SEC22AQ96IW7 307 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 MOGAT1Q96PD6 335 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 LMF1Q96S06 567 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 AMELYQ99218 206 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 LPAR4Q99677 370 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 NMES1Q9C002 83 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 CST11Q9H112 138 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 TLNRD1Q9H1K6 362 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 ELOVL3Q9HB03 270 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 ZNF304Q9HCX3 659 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 CYTL1Q9NRR1 136 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 UQCC1Q9NVA1 299 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 PRRC2BQ5JSZ5 2229 aaKnown RBP6.57□□□□□ -1.36
USP48-206ENST00000464577 SCN3AQ9NY46 2000 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 EML5Q05BV3 1969 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 A0A1W2PP55 124 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 LOC390937A0A1W2PQ73 354 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 MEX3AA1L020 520 aaKnown RBP6.57□□□□□ -1.36
USP48-206ENST00000464577 DBX1A6NMT0 343 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 SLC34A2O95436 690 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 DUS4LO95620 317 aaKnown RBP6.57□□□□□ -1.36
USP48-206ENST00000464577 S100A8P05109 93 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 LYL1P12980 280 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 TBPP20226 339 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 ITGB8P26012 769 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 KCNJ3P48549 501 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 CENPAP49450 140 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 AKR1C2P52895 323 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 TAS2R31P59538 309 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 CYCSP99999 105 aaKnown RBP6.57□□□□□ -1.36
USP48-206ENST00000464577 AKR1C1Q04828 323 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 PDZK1IP1Q13113 114 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 AIMP2Q13155 320 aaKnown RBP6.57□□□□□ -1.36
USP48-206ENST00000464577 SWI5Q1ZZU3 235 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 ODF4Q2M2E3 257 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 MST1LQ2TV78 715 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 KLHL26Q53HC5 615 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 FNDC7Q5VTL7 733 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 SLC18B1Q6NT16 456 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 LRRC69Q6ZNQ3 347 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 CACUL1Q86Y37 369 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 SHISA5Q8N114 240 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 BCORP1Q8N888 145 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 PLPP7Q8NBV4 271 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 BAHD1Q8TBE0 780 aaPredicted RBP6.57□□□□□ -1.36
USP48-206ENST00000464577 RXFP4Q8TDU9 374 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 ASB5Q8WWX0 329 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 MRGPRFQ96AM1 343 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 SAT2Q96F10 170 aaPredicted RBP6.57□□□□□ -1.36
USP48-206ENST00000464577 NRIP2Q9BQI9 281 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 ADAT1Q9BUB4 502 aaKnown RBP6.57□□□□□ -1.36
USP48-206ENST00000464577 NUDT9Q9BW91 350 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 SLC17A9Q9BYT1 436 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.57□□□□□ -1.36
USP48-206ENST00000464577 CHMP1AQ9HD42 196 aaPredicted RBP6.57□□□□□ -1.36
USP48-206ENST00000464577 TREM1Q9NP99 234 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 ACKR4Q9NPB9 350 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 TAS2R4Q9NYW5 299 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 GDE1Q9NZC3 331 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 LRIT1Q9P2V4 623 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 KCNG2Q9UJ96 466 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 FARSAQ9Y285 508 aaKnown RBP6.57□□□□□ -1.36
USP48-206ENST00000464577 CENPFP49454 3210 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 A0A1W2PQU0 124 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 CPED1A4D0V7 1026 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 FAM25EA8MYX2 175 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 H7C1C5 153 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 SMAD9O15198 467 aaKnown RBP6.56□□□□□ -1.36
USP48-206ENST00000464577 EIF3GO75821 320 aaKnown RBP eCLIP6.56□□□□□ -1.36
USP48-206ENST00000464577 STK17BO94768 372 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 F13BP05160 661 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 ACAA1P09110 424 aaPredicted RBP6.56□□□□□ -1.36
USP48-206ENST00000464577 FAM157CP0CG43 387 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 PGAM2P15259 253 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 RAB5BP61020 215 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 LCN6P62502 163 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 SKP1P63208 163 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms