RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 IGKV1-8A0A0C4DH67 115 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 TMEM72A0PK05 275 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 C9orf170A2RU37 121 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 C5orf51A6NDU8 294 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 XKRYO14609 159 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 OR10H2O60403 315 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 PRKRAO75569 313 aaKnown RBP6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 RPP14O95059 124 aaKnown RBP6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 OR6A2O95222 327 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 PCCBP05166 539 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 CRYBA1P05813 215 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 CRHP06850 196 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 DCNP07585 359 aaKnown RBP6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 CHRM2P08172 466 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 HNRNPA1P09651 372 aaKnown RBP eCLIP6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 CISD3P0C7P0 127 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 ZNF888P0CJ79 500 aaPredicted RBP6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 SLC35E2P0CK97 266 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 OR8G3PP0DMU2 310 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 SPP1P10451 314 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 CD37P11049 281 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 NAT2P11245 290 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 ZNF14P17017 642 aaPredicted RBP6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 ZBTB25P24278 435 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 ABCD3P28288 659 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 CD1CP29017 333 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 SLC6A8P48029 635 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 SOX2P48431 317 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 DNASE1L1P49184 302 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 DVL1P1P54792 670 aaPredicted RBP6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 STARD6P59095 220 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 RAB2AP61019 212 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 SIM1P81133 766 aaPredicted RBP6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 HTRA4P83105 476 aaPredicted RBP6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 DUSP2Q05923 314 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 RHEBQ15382 184 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 DHCR24Q15392 516 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 EIF2S3LQ2VIR3 472 aaKnown RBP6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 ZNF750Q32MQ0 723 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 C2orf76Q3KRA6 126 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 ALG10Q5BKT4 473 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 TMEM244Q5VVB8 128 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 NKAIN2Q5VXU1 208 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 PLPP4Q5VZY2 271 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 NSUN5P2Q63ZY6 315 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 OR10K2Q6IF99 312 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 FAAP20Q6NZ36 180 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 TMEM71Q6P5X7 295 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 PRSS54Q6PEW0 395 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 PEG10Q86TG7 708 aaKnown RBP6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 ANGPTL5Q86XS5 388 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 STX12Q86Y82 276 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 KRTAP19-1Q8IUB9 90 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 KRTAP1-3Q8IUG1 177 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 MISPQ8IVT2 679 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 ARRDC1Q8N5I2 433 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 C10orf53Q8N6V4 93 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 EXD3Q8N9H8 876 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 WDSUB1Q8N9V3 476 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 OR51D1Q8NGF3 324 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 OR8S1Q8NH09 359 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 LCN9Q8WX39 176 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 RGP1Q92546 391 aaPredicted RBP6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 GCDHQ92947 438 aaPredicted RBP6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 ARMC5Q96C12 935 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 SLC41A2Q96JW4 573 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 ZNF285Q96NJ3 590 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 AQP10Q96PS8 301 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 TAAR9Q96RI9 348 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 NMNAT3Q96T66 252 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 S100A13Q99584 98 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 SMAD5Q99717 465 aaKnown RBP6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 KXD1Q9BQD3 176 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 CCDC3Q9BQI4 270 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 NRIP2Q9BQI9 281 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 C2orf42Q9NWW7 574 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 ANKRD10Q9NXR5 420 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 RCC2Q9P258 522 aaKnown RBP6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 DEC1Q9P2X7 70 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 SLC23A2Q9UGH3 650 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 APOBEC3BQ9UH17 382 aaKnown RBP6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 MRM2Q9UI43 246 aaKnown RBP6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 ABT1Q9ULW3 272 aaKnown RBP6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 SCN2AQ99250 2005 aa6.49□□□□□ -1.37
CLSTN1-204ENST00000464286 FAM221BA6H8Z2 402 aa6.48□□□□□ -1.37
CLSTN1-204ENST00000464286 SYNDIG1LA6NDD5 238 aa6.48□□□□□ -1.37
CLSTN1-204ENST00000464286 NPIPB9F8W1W9 429 aa6.48□□□□□ -1.37
CLSTN1-204ENST00000464286 RNASEK-C17orf49H0YIS7 233 aa6.48□□□□□ -1.37
CLSTN1-204ENST00000464286 PEX12O00623 359 aa6.48□□□□□ -1.37
CLSTN1-204ENST00000464286 TGOLN2O43493 480 aa6.48□□□□□ -1.37
CLSTN1-204ENST00000464286 TNFSF14O43557 240 aa6.48□□□□□ -1.37
CLSTN1-204ENST00000464286 DOK2O60496 412 aa6.48□□□□□ -1.37
CLSTN1-204ENST00000464286 EIF3GO75821 320 aaKnown RBP eCLIP6.48□□□□□ -1.37
CLSTN1-204ENST00000464286 JTBO76095 146 aa6.48□□□□□ -1.37
CLSTN1-204ENST00000464286 STK17BO94768 372 aa6.48□□□□□ -1.37
CLSTN1-204ENST00000464286 HTR3BO95264 441 aa6.48□□□□□ -1.37
CLSTN1-204ENST00000464286 BPNT1O95861 308 aa6.48□□□□□ -1.37
CLSTN1-204ENST00000464286 ABHD16AO95870 558 aa6.48□□□□□ -1.37
CLSTN1-204ENST00000464286 GAPDHP04406 335 aaKnown RBP6.48□□□□□ -1.37
CLSTN1-204ENST00000464286 POU2F2P09086 479 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms