RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 FBXL2Q9UKC9 423 aa18.23■□□□□ 0.51
TUBGCP3-204ENST00000464139 ING4Q9UNL4 249 aa18.23■□□□□ 0.51
TUBGCP3-204ENST00000464139 WIF1Q9Y5W5 379 aa18.23■□□□□ 0.51
TUBGCP3-204ENST00000464139 ARPC1BO15143 372 aaKnown RBP18.22■□□□□ 0.51
TUBGCP3-204ENST00000464139 SRSF10O75494 262 aaKnown RBP18.22■□□□□ 0.51
TUBGCP3-204ENST00000464139 CTAG2O75638 210 aa18.22■□□□□ 0.51
TUBGCP3-204ENST00000464139 MNDAP41218 407 aa18.22■□□□□ 0.51
TUBGCP3-204ENST00000464139 RAB11BQ15907 218 aa18.22■□□□□ 0.51
TUBGCP3-204ENST00000464139 DNM1P34Q6PK57 102 aa18.22■□□□□ 0.51
TUBGCP3-204ENST00000464139 C9orf62Q8N4C0 152 aa18.22■□□□□ 0.51
TUBGCP3-204ENST00000464139 FAM3DQ96BQ1 224 aa18.22■□□□□ 0.51
TUBGCP3-204ENST00000464139 SERINC1Q9NRX5 453 aa18.22■□□□□ 0.51
TUBGCP3-204ENST00000464139 CENPMQ9NSP4 180 aa18.22■□□□□ 0.51
TUBGCP3-204ENST00000464139 CDV3Q9UKY7 258 aaKnown RBP18.22■□□□□ 0.51
TUBGCP3-204ENST00000464139 R4GMQ9 66 aa18.22■□□□□ 0.51
TUBGCP3-204ENST00000464139 LOC101059948A0A1B0GTJ6 334 aa18.22■□□□□ 0.51
TUBGCP3-204ENST00000464139 NAP1L6A6NFF2 107 aa18.22■□□□□ 0.51
TUBGCP3-204ENST00000464139 ZNF28P17035 718 aa18.22■□□□□ 0.51
TUBGCP3-204ENST00000464139 ANKRD16Q6P6B7 361 aa18.22■□□□□ 0.51
TUBGCP3-204ENST00000464139 DEFB126Q9BYW3 111 aa18.22■□□□□ 0.51
TUBGCP3-204ENST00000464139 ALKBH4Q9NXW9 302 aa18.22■□□□□ 0.51
TUBGCP3-204ENST00000464139 SLC17A2O00624 439 aa18.21■□□□□ 0.51
TUBGCP3-204ENST00000464139 LDOC1O95751 146 aaPredicted RBP18.21■□□□□ 0.51
TUBGCP3-204ENST00000464139 ONECUT2O95948 504 aa18.21■□□□□ 0.51
TUBGCP3-204ENST00000464139 ALDOBP05062 364 aa18.21■□□□□ 0.51
TUBGCP3-204ENST00000464139 CELA2AP08217 269 aa18.21■□□□□ 0.51
TUBGCP3-204ENST00000464139 DLX5P56178 289 aa18.21■□□□□ 0.51
TUBGCP3-204ENST00000464139 LINC00303Q3SY05 128 aa18.21■□□□□ 0.51
TUBGCP3-204ENST00000464139 MRPL14Q6P1L8 145 aaKnown RBP18.21■□□□□ 0.51
TUBGCP3-204ENST00000464139 OR11H4Q8NGC9 324 aa18.21■□□□□ 0.51
TUBGCP3-204ENST00000464139 OR1J4Q8NGS1 313 aa18.21■□□□□ 0.51
TUBGCP3-204ENST00000464139 THRSPQ92748 146 aa18.21■□□□□ 0.51
TUBGCP3-204ENST00000464139 SLC25A44Q96H78 314 aaPredicted RBP18.21■□□□□ 0.51
TUBGCP3-204ENST00000464139 RASL10BQ96S79 203 aa18.21■□□□□ 0.51
TUBGCP3-204ENST00000464139 CMKLR1Q99788 373 aa18.21■□□□□ 0.51
TUBGCP3-204ENST00000464139 POTEKPQ9BYX7 375 aa18.21■□□□□ 0.51
TUBGCP3-204ENST00000464139 G6PC2Q9NQR9 355 aa18.21■□□□□ 0.51
TUBGCP3-204ENST00000464139 B3GAT1Q9P2W7 334 aa18.21■□□□□ 0.51
TUBGCP3-204ENST00000464139 MGAT4AQ9UM21 535 aa18.21■□□□□ 0.51
TUBGCP3-204ENST00000464139 A0A1W2PNR3 127 aa18.21■□□□□ 0.5
TUBGCP3-204ENST00000464139 GGT3PA6NGU5 568 aa18.21■□□□□ 0.5
TUBGCP3-204ENST00000464139 PATE3B3GLJ2 98 aa18.21■□□□□ 0.5
TUBGCP3-204ENST00000464139 LMX1BO60663 402 aa18.21■□□□□ 0.5
TUBGCP3-204ENST00000464139 FCER2P06734 321 aa18.21■□□□□ 0.5
TUBGCP3-204ENST00000464139 SULT1A3P0DMM9 295 aa18.21■□□□□ 0.5
TUBGCP3-204ENST00000464139 SULT1A4P0DMN0 295 aa18.21■□□□□ 0.5
TUBGCP3-204ENST00000464139 EIF1AXP47813 144 aaKnown RBP18.21■□□□□ 0.5
TUBGCP3-204ENST00000464139 MAP2K6P52564 334 aa18.21■□□□□ 0.5
TUBGCP3-204ENST00000464139 GUCA2AQ02747 115 aa18.21■□□□□ 0.5
TUBGCP3-204ENST00000464139 OLFML2AQ68BL7 652 aa18.21■□□□□ 0.5
TUBGCP3-204ENST00000464139 Q6ZTK2 550 aa18.21■□□□□ 0.5
TUBGCP3-204ENST00000464139 OR51A2Q8NGJ7 313 aa18.21■□□□□ 0.5
TUBGCP3-204ENST00000464139 MRGPRX4Q96LA9 322 aa18.21■□□□□ 0.5
TUBGCP3-204ENST00000464139 NOX3Q9HBY0 568 aa18.21■□□□□ 0.5
TUBGCP3-204ENST00000464139 ZNF275Q9NSD4 429 aaPredicted RBP18.21■□□□□ 0.5
TUBGCP3-204ENST00000464139 C19orf25Q9UFG5 118 aaPredicted RBP18.21■□□□□ 0.5
TUBGCP3-204ENST00000464139 OR52A1Q9UKL2 312 aa18.21■□□□□ 0.5
TUBGCP3-204ENST00000464139 B3GALT5Q9Y2C3 310 aa18.21■□□□□ 0.5
TUBGCP3-204ENST00000464139 EML6Q6ZMW3 1958 aa18.2■□□□□ 0.5
TUBGCP3-204ENST00000464139 TRAV18A0A075B6X5 111 aa18.2■□□□□ 0.5
TUBGCP3-204ENST00000464139 TMEM269A0A1B0GVZ9 245 aa18.2■□□□□ 0.5
TUBGCP3-204ENST00000464139 MEIS3P1A6NDR6 274 aa18.2■□□□□ 0.5
TUBGCP3-204ENST00000464139 ETV2O00321 342 aaPredicted RBP18.2■□□□□ 0.5
TUBGCP3-204ENST00000464139 CD2P06729 351 aa18.2■□□□□ 0.5
TUBGCP3-204ENST00000464139 MSX1P28360 303 aa18.2■□□□□ 0.5
TUBGCP3-204ENST00000464139 SCAND1P57086 179 aa18.2■□□□□ 0.5
TUBGCP3-204ENST00000464139 ELFN2Q5R3F8 820 aa18.2■□□□□ 0.5
TUBGCP3-204ENST00000464139 FGD2Q7Z6J4 655 aa18.2■□□□□ 0.5
TUBGCP3-204ENST00000464139 UBALD2Q8IYN6 164 aa18.2■□□□□ 0.5
TUBGCP3-204ENST00000464139 OR13C3Q8NGS6 347 aa18.2■□□□□ 0.5
TUBGCP3-204ENST00000464139 ZNF431Q8TF32 576 aaPredicted RBP18.2■□□□□ 0.5
TUBGCP3-204ENST00000464139 C15orf40Q8WUR7 153 aa18.2■□□□□ 0.5
TUBGCP3-204ENST00000464139 EDAQ92838 391 aa18.2■□□□□ 0.5
TUBGCP3-204ENST00000464139 NAT6Q93015 286 aa18.2■□□□□ 0.5
TUBGCP3-204ENST00000464139 GAL3ST1Q99999 423 aa18.2■□□□□ 0.5
TUBGCP3-204ENST00000464139 CKLFQ9UBR5 152 aa18.2■□□□□ 0.5
TUBGCP3-204ENST00000464139 CGGBP1Q9UFW8 167 aaPredicted RBP18.2■□□□□ 0.5
TUBGCP3-204ENST00000464139 TNRC6BQ9UPQ9 1833 aaKnown RBP18.2■□□□□ 0.5
TUBGCP3-204ENST00000464139 LOC107986453A0A1B0GWG9 222 aa18.2■□□□□ 0.5
TUBGCP3-204ENST00000464139 TSC22D2O75157 780 aa18.2■□□□□ 0.5
TUBGCP3-204ENST00000464139 RAD52P43351 418 aa18.2■□□□□ 0.5
TUBGCP3-204ENST00000464139 ZP1P60852 638 aa18.2■□□□□ 0.5
TUBGCP3-204ENST00000464139 GALK2Q01415 458 aa18.2■□□□□ 0.5
TUBGCP3-204ENST00000464139 PCK2Q16822 640 aa18.2■□□□□ 0.5
TUBGCP3-204ENST00000464139 PCGF3Q3KNV8 242 aa18.2■□□□□ 0.5
TUBGCP3-204ENST00000464139 PRAMEF20Q5VT98 475 aa18.2■□□□□ 0.5
TUBGCP3-204ENST00000464139 SLC25A25Q6KCM7 469 aa18.2■□□□□ 0.5
TUBGCP3-204ENST00000464139 GRPEL2Q8TAA5 225 aa18.2■□□□□ 0.5
TUBGCP3-204ENST00000464139 SLC22A8Q8TCC7 542 aa18.2■□□□□ 0.5
TUBGCP3-204ENST00000464139 SEC22CQ9BRL7 303 aa18.2■□□□□ 0.5
TUBGCP3-204ENST00000464139 SLC26A1Q9H2B4 701 aa18.2■□□□□ 0.5
TUBGCP3-204ENST00000464139 SDHAF3Q9NRP4 125 aa18.2■□□□□ 0.5
TUBGCP3-204ENST00000464139 LOC100289279A0A1B0GTE1 492 aa18.19■□□□□ 0.5
TUBGCP3-204ENST00000464139 TMEM272A0A1B0GTI8 110 aa18.19■□□□□ 0.5
TUBGCP3-204ENST00000464139 A0A1W2PPC1 479 aa18.19■□□□□ 0.5
TUBGCP3-204ENST00000464139 DCDC2BA2VCK2 349 aa18.19■□□□□ 0.5
TUBGCP3-204ENST00000464139 RBBP9O75884 186 aa18.19■□□□□ 0.5
TUBGCP3-204ENST00000464139 FAM166AQ6J272 317 aa18.19■□□□□ 0.5
TUBGCP3-204ENST00000464139 DNM1P46Q6ZS02 220 aa18.19■□□□□ 0.5
TUBGCP3-204ENST00000464139 LUZP2Q86TE4 346 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms