RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 PRKDCP78527 4128 aaKnown RBP14.56□□□□□ -0.08
HMGN1-210ENST00000464078 PPIAL4GP0DN37 164 aa14.56□□□□□ -0.08
HMGN1-210ENST00000464078 MAGOHP61326 146 aaKnown RBP14.56□□□□□ -0.08
HMGN1-210ENST00000464078 ERVK-25P63136 954 aa14.56□□□□□ -0.08
HMGN1-210ENST00000464078 TNFAIP6P98066 277 aaPredicted RBP14.56□□□□□ -0.08
HMGN1-210ENST00000464078 MTX3Q5HYI7 312 aa14.56□□□□□ -0.08
HMGN1-210ENST00000464078 LRRC28Q86X40 367 aaPredicted RBP14.56□□□□□ -0.08
HMGN1-210ENST00000464078 ALDH16A1Q8IZ83 802 aa14.56□□□□□ -0.08
HMGN1-210ENST00000464078 BCL6BQ8N143 479 aaPredicted RBP14.56□□□□□ -0.08
HMGN1-210ENST00000464078 HDAC2Q92769 488 aaKnown RBP14.56□□□□□ -0.08
HMGN1-210ENST00000464078 TLCD1Q96CP7 247 aa14.56□□□□□ -0.08
HMGN1-210ENST00000464078 MRI1Q9BV20 369 aa14.56□□□□□ -0.08
HMGN1-210ENST00000464078 WNT5BQ9H1J7 359 aa14.56□□□□□ -0.08
HMGN1-210ENST00000464078 NANOGQ9H9S0 305 aa14.56□□□□□ -0.08
HMGN1-210ENST00000464078 ELOVL3Q9HB03 270 aa14.56□□□□□ -0.08
HMGN1-210ENST00000464078 IGKV1D-43A0A0B4J1Z2 117 aa14.55□□□□□ -0.08
HMGN1-210ENST00000464078 OR7A10O76100 309 aa14.55□□□□□ -0.08
HMGN1-210ENST00000464078 NGFP01138 241 aa14.55□□□□□ -0.08
HMGN1-210ENST00000464078 CST2P09228 141 aa14.55□□□□□ -0.08
HMGN1-210ENST00000464078 SBK2P0C263 348 aa14.55□□□□□ -0.08
HMGN1-210ENST00000464078 TNFRSF1AP19438 455 aa14.55□□□□□ -0.08
HMGN1-210ENST00000464078 FUT1P19526 365 aa14.55□□□□□ -0.08
HMGN1-210ENST00000464078 PCGF2P35227 344 aa14.55□□□□□ -0.08
HMGN1-210ENST00000464078 AQP2P41181 271 aa14.55□□□□□ -0.08
HMGN1-210ENST00000464078 MTPNP58546 118 aa14.55□□□□□ -0.08
HMGN1-210ENST00000464078 PCBD1P61457 104 aa14.55□□□□□ -0.08
HMGN1-210ENST00000464078 SEC61A1P61619 476 aaKnown RBP14.55□□□□□ -0.08
HMGN1-210ENST00000464078 BTG1P62324 171 aa14.55□□□□□ -0.08
HMGN1-210ENST00000464078 ZMYND11Q15326 602 aa14.55□□□□□ -0.08
HMGN1-210ENST00000464078 SLC9A3R2Q15599 337 aa14.55□□□□□ -0.08
HMGN1-210ENST00000464078 AGKQ53H12 422 aa14.55□□□□□ -0.08
HMGN1-210ENST00000464078 SLC25A47Q6Q0C1 308 aa14.55□□□□□ -0.08
HMGN1-210ENST00000464078 FOXL2NBQ6ZUU3 175 aa14.55□□□□□ -0.08
HMGN1-210ENST00000464078 DHDDSQ86SQ9 333 aa14.55□□□□□ -0.08
HMGN1-210ENST00000464078 RASSF5Q8WWW0 418 aa14.55□□□□□ -0.08
HMGN1-210ENST00000464078 SIGLEC11Q96RL6 698 aa14.55□□□□□ -0.08
HMGN1-210ENST00000464078 CGREF1Q99674 301 aa14.55□□□□□ -0.08
HMGN1-210ENST00000464078 ALG12Q9BV10 488 aa14.55□□□□□ -0.08
HMGN1-210ENST00000464078 POLR2J2Q9GZM3 115 aaKnown RBP14.55□□□□□ -0.08
HMGN1-210ENST00000464078 POLR2J3Q9H1A7 115 aaKnown RBP14.55□□□□□ -0.08
HMGN1-210ENST00000464078 TXNIPQ9H3M7 391 aa14.55□□□□□ -0.08
HMGN1-210ENST00000464078 KAT8Q9H7Z6 458 aaKnown RBP14.55□□□□□ -0.08
HMGN1-210ENST00000464078 EGFL7Q9UHF1 273 aa14.55□□□□□ -0.08
HMGN1-210ENST00000464078 TUBG1P23258 451 aa14.54□□□□□ -0.08
HMGN1-210ENST00000464078 CPT2P23786 658 aa14.54□□□□□ -0.08
HMGN1-210ENST00000464078 ARHGDIAP52565 204 aa14.54□□□□□ -0.08
HMGN1-210ENST00000464078 CRYBA2P53672 197 aa14.54□□□□□ -0.08
HMGN1-210ENST00000464078 PAX8Q06710 450 aa14.54□□□□□ -0.08
HMGN1-210ENST00000464078 CD47Q08722 323 aa14.54□□□□□ -0.08
HMGN1-210ENST00000464078 PSG7Q13046 419 aa14.54□□□□□ -0.08
HMGN1-210ENST00000464078 SELPLGQ14242 412 aa14.54□□□□□ -0.08
HMGN1-210ENST00000464078 TAF11Q15544 211 aa14.54□□□□□ -0.08
HMGN1-210ENST00000464078 SGCAQ16586 387 aa14.54□□□□□ -0.08
HMGN1-210ENST00000464078 INTS11Q5TA45 600 aaKnown RBP14.54□□□□□ -0.08
HMGN1-210ENST00000464078 LEG1Q6P5S2 330 aa14.54□□□□□ -0.08
HMGN1-210ENST00000464078 ARL9Q6T311 187 aa14.54□□□□□ -0.08
HMGN1-210ENST00000464078 NPEPL1Q8NDH3 523 aa14.54□□□□□ -0.08
HMGN1-210ENST00000464078 MOSPD2Q8NHP6 518 aa14.54□□□□□ -0.08
HMGN1-210ENST00000464078 PFN4Q8NHR9 129 aa14.54□□□□□ -0.08
HMGN1-210ENST00000464078 FNDC8Q8TC99 324 aa14.54□□□□□ -0.08
HMGN1-210ENST00000464078 SGTBQ96EQ0 304 aa14.54□□□□□ -0.08
HMGN1-210ENST00000464078 SAMD8Q96LT4 415 aa14.54□□□□□ -0.08
HMGN1-210ENST00000464078 DCLRE1CQ96SD1 692 aaKnown RBP14.54□□□□□ -0.08
HMGN1-210ENST00000464078 RABEP2Q9H5N1 569 aa14.54□□□□□ -0.08
HMGN1-210ENST00000464078 TUBG2Q9NRH3 451 aa14.54□□□□□ -0.08
HMGN1-210ENST00000464078 C20orf141Q9NUB4 165 aa14.54□□□□□ -0.08
HMGN1-210ENST00000464078 OR5V1Q9UGF6 321 aa14.54□□□□□ -0.08
HMGN1-210ENST00000464078 IL20RAQ9UHF4 553 aa14.54□□□□□ -0.08
HMGN1-210ENST00000464078 LRCH1Q9Y2L9 728 aa14.54□□□□□ -0.08
HMGN1-210ENST00000464078 TIMM10BQ9Y5J6 103 aa14.54□□□□□ -0.08
HMGN1-210ENST00000464078 MMP24Q9Y5R2 645 aa14.54□□□□□ -0.08
HMGN1-210ENST00000464078 A0A0G2JK05 382 aa14.53□□□□□ -0.08
HMGN1-210ENST00000464078 TIMM8AO60220 97 aaPredicted RBP14.53□□□□□ -0.08
HMGN1-210ENST00000464078 GSTM3P21266 225 aa14.53□□□□□ -0.08
HMGN1-210ENST00000464078 KITLGP21583 273 aa14.53□□□□□ -0.08
HMGN1-210ENST00000464078 TNFSF4P23510 183 aa14.53□□□□□ -0.08
HMGN1-210ENST00000464078 LAP3P28838 519 aa14.53□□□□□ -0.08
HMGN1-210ENST00000464078 MDH2P40926 338 aaKnown RBP14.53□□□□□ -0.08
HMGN1-210ENST00000464078 MTNR1AP48039 350 aa14.53□□□□□ -0.08
HMGN1-210ENST00000464078 PAX2Q02962 417 aa14.53□□□□□ -0.08
HMGN1-210ENST00000464078 HNRNPA0Q13151 305 aaKnown RBP14.53□□□□□ -0.08
HMGN1-210ENST00000464078 MIDNQ504T8 468 aa14.53□□□□□ -0.08
HMGN1-210ENST00000464078 ESCO2Q56NI9 601 aa14.53□□□□□ -0.08
HMGN1-210ENST00000464078 CCDC80Q76M96 950 aa14.53□□□□□ -0.08
HMGN1-210ENST00000464078 MUC20Q8N307 709 aaPredicted RBP14.53□□□□□ -0.08
HMGN1-210ENST00000464078 PARP8Q8N3A8 854 aa14.53□□□□□ -0.08
HMGN1-210ENST00000464078 TMEM255BQ8WV15 326 aa14.53□□□□□ -0.08
HMGN1-210ENST00000464078 NSMAFQ92636 917 aa14.53□□□□□ -0.08
HMGN1-210ENST00000464078 C4orf45Q96LM5 186 aa14.53□□□□□ -0.08
HMGN1-210ENST00000464078 MAN2C1Q9NTJ4 1040 aa14.53□□□□□ -0.08
HMGN1-210ENST00000464078 IL19Q9UHD0 177 aa14.53□□□□□ -0.08
HMGN1-210ENST00000464078 NDRG4Q9ULP0 352 aaKnown RBP14.53□□□□□ -0.08
HMGN1-210ENST00000464078 HIF3AQ9Y2N7 669 aa14.53□□□□□ -0.08
HMGN1-210ENST00000464078 OR5F1O95221 314 aa14.52□□□□□ -0.09
HMGN1-210ENST00000464078 PLATP00750 562 aa14.52□□□□□ -0.09
HMGN1-210ENST00000464078 COX5BP10606 129 aa14.52□□□□□ -0.09
HMGN1-210ENST00000464078 CD80P33681 288 aa14.52□□□□□ -0.09
HMGN1-210ENST00000464078 FAM205BPQ63HN1 556 aa14.52□□□□□ -0.09
HMGN1-210ENST00000464078 ZNF774Q6NX45 483 aa14.52□□□□□ -0.09
HMGN1-210ENST00000464078 SYT9Q86SS6 491 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms