RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 OR2H1Q9GZK4 316 aa17.48■□□□□ 0.39
CPSF7-209ENST00000463244 WNT5BQ9H1J7 359 aa17.48■□□□□ 0.39
CPSF7-209ENST00000463244 TMEM106BQ9NUM4 274 aa17.48■□□□□ 0.39
CPSF7-209ENST00000463244 OR7A10O76100 309 aa17.47■□□□□ 0.39
CPSF7-209ENST00000463244 VIMP08670 466 aaKnown RBP17.47■□□□□ 0.39
CPSF7-209ENST00000463244 TSPAN19P0C672 248 aa17.47■□□□□ 0.39
CPSF7-209ENST00000463244 RBMXP38159 391 aaKnown RBP17.47■□□□□ 0.39
CPSF7-209ENST00000463244 SLC6A9P48067 706 aa17.47■□□□□ 0.39
CPSF7-209ENST00000463244 MTPNP58546 118 aa17.47■□□□□ 0.39
CPSF7-209ENST00000463244 CDK5R2Q13319 367 aa17.47■□□□□ 0.39
CPSF7-209ENST00000463244 MTX3Q5HYI7 312 aa17.47■□□□□ 0.39
CPSF7-209ENST00000463244 ALDH16A1Q8IZ83 802 aa17.47■□□□□ 0.39
CPSF7-209ENST00000463244 MOSPD2Q8NHP6 518 aa17.47■□□□□ 0.39
CPSF7-209ENST00000463244 PFN4Q8NHR9 129 aa17.47■□□□□ 0.39
CPSF7-209ENST00000463244 TLCD1Q96CP7 247 aa17.47■□□□□ 0.39
CPSF7-209ENST00000463244 MRI1Q9BV20 369 aa17.47■□□□□ 0.39
CPSF7-209ENST00000463244 NANOGQ9H9S0 305 aa17.47■□□□□ 0.39
CPSF7-209ENST00000463244 NPIPB13A6NJU9 1138 aa17.46■□□□□ 0.39
CPSF7-209ENST00000463244 NPIPB4C9JG80 1138 aa17.46■□□□□ 0.39
CPSF7-209ENST00000463244 F5H0A9 414 aaPredicted RBP17.46■□□□□ 0.39
CPSF7-209ENST00000463244 IGF2P01344 180 aa17.46■□□□□ 0.39
CPSF7-209ENST00000463244 NR2C1P13056 603 aa17.46■□□□□ 0.39
CPSF7-209ENST00000463244 CD47Q08722 323 aa17.46■□□□□ 0.39
CPSF7-209ENST00000463244 PSG7Q13046 419 aa17.46■□□□□ 0.39
CPSF7-209ENST00000463244 SLC9A3R2Q15599 337 aa17.46■□□□□ 0.39
CPSF7-209ENST00000463244 SLC25A47Q6Q0C1 308 aa17.46■□□□□ 0.39
CPSF7-209ENST00000463244 DHDDSQ86SQ9 333 aa17.46■□□□□ 0.39
CPSF7-209ENST00000463244 LRRC28Q86X40 367 aaPredicted RBP17.46■□□□□ 0.39
CPSF7-209ENST00000463244 SLC30A8Q8IWU4 369 aa17.46■□□□□ 0.39
CPSF7-209ENST00000463244 ZNF283Q8N7M2 679 aa17.46■□□□□ 0.39
CPSF7-209ENST00000463244 LIPHQ8WWY8 451 aa17.46■□□□□ 0.39
CPSF7-209ENST00000463244 CGREF1Q99674 301 aa17.46■□□□□ 0.39
CPSF7-209ENST00000463244 SLITRK2Q9H156 845 aa17.46■□□□□ 0.39
CPSF7-209ENST00000463244 ELOVL3Q9HB03 270 aa17.46■□□□□ 0.39
CPSF7-209ENST00000463244 C20orf141Q9NUB4 165 aa17.46■□□□□ 0.39
CPSF7-209ENST00000463244 GMNCA6NCL1 334 aa17.45■□□□□ 0.38
CPSF7-209ENST00000463244 TIMM8AO60220 97 aaPredicted RBP17.45■□□□□ 0.38
CPSF7-209ENST00000463244 CST2P09228 141 aa17.45■□□□□ 0.38
CPSF7-209ENST00000463244 LAP3P28838 519 aa17.45■□□□□ 0.38
CPSF7-209ENST00000463244 PCGF2P35227 344 aa17.45■□□□□ 0.38
CPSF7-209ENST00000463244 RBM34P42696 430 aaKnown RBP17.45■□□□□ 0.38
CPSF7-209ENST00000463244 ARHGDIAP52565 204 aa17.45■□□□□ 0.38
CPSF7-209ENST00000463244 CRYBA2P53672 197 aa17.45■□□□□ 0.38
CPSF7-209ENST00000463244 BTG1P62324 171 aa17.45■□□□□ 0.38
CPSF7-209ENST00000463244 ZMYND11Q15326 602 aa17.45■□□□□ 0.38
CPSF7-209ENST00000463244 ZER1Q7Z7L7 766 aa17.45■□□□□ 0.38
CPSF7-209ENST00000463244 NKAIN4Q8IVV8 208 aa17.45■□□□□ 0.38
CPSF7-209ENST00000463244 DPP10Q8N608 796 aa17.45■□□□□ 0.38
CPSF7-209ENST00000463244 SLC26A7Q8TE54 656 aa17.45■□□□□ 0.38
CPSF7-209ENST00000463244 TMEM255BQ8WV15 326 aa17.45■□□□□ 0.38
CPSF7-209ENST00000463244 TAF15Q92804 592 aaKnown RBP eCLIP17.45■□□□□ 0.38
CPSF7-209ENST00000463244 SGTBQ96EQ0 304 aa17.45■□□□□ 0.38
CPSF7-209ENST00000463244 C4orf45Q96LM5 186 aa17.45■□□□□ 0.38
CPSF7-209ENST00000463244 SAMD8Q96LT4 415 aa17.45■□□□□ 0.38
CPSF7-209ENST00000463244 SIGLEC11Q96RL6 698 aa17.45■□□□□ 0.38
CPSF7-209ENST00000463244 TXNIPQ9H3M7 391 aa17.45■□□□□ 0.38
CPSF7-209ENST00000463244 KAT8Q9H7Z6 458 aaKnown RBP17.45■□□□□ 0.38
CPSF7-209ENST00000463244 TIMM10BQ9Y5J6 103 aa17.45■□□□□ 0.38
CPSF7-209ENST00000463244 TNFRSF1AP19438 455 aa17.44■□□□□ 0.38
CPSF7-209ENST00000463244 PAX8Q06710 450 aa17.44■□□□□ 0.38
CPSF7-209ENST00000463244 TAF11Q15544 211 aa17.44■□□□□ 0.38
CPSF7-209ENST00000463244 MIDNQ504T8 468 aa17.44■□□□□ 0.38
CPSF7-209ENST00000463244 INTS11Q5TA45 600 aaKnown RBP17.44■□□□□ 0.38
CPSF7-209ENST00000463244 ZNF774Q6NX45 483 aa17.44■□□□□ 0.38
CPSF7-209ENST00000463244 LEG1Q6P5S2 330 aa17.44■□□□□ 0.38
CPSF7-209ENST00000463244 RASSF5Q8WWW0 418 aa17.44■□□□□ 0.38
CPSF7-209ENST00000463244 ALG12Q9BV10 488 aa17.44■□□□□ 0.38
CPSF7-209ENST00000463244 MS4A7Q9GZW8 240 aaPredicted RBP17.44■□□□□ 0.38
CPSF7-209ENST00000463244 NDUFAF1Q9Y375 327 aa17.44■□□□□ 0.38
CPSF7-209ENST00000463244 IGHV4-38-2P0DP08 117 aa17.43■□□□□ 0.38
CPSF7-209ENST00000463244 TNFSF4P23510 183 aa17.43■□□□□ 0.38
CPSF7-209ENST00000463244 PCBD1P61457 104 aa17.43■□□□□ 0.38
CPSF7-209ENST00000463244 LAPTM4AQ15012 233 aa17.43■□□□□ 0.38
CPSF7-209ENST00000463244 ESCO2Q56NI9 601 aa17.43■□□□□ 0.38
CPSF7-209ENST00000463244 FOXL2NBQ6ZUU3 175 aa17.43■□□□□ 0.38
CPSF7-209ENST00000463244 C9orf139Q6ZV77 190 aa17.43■□□□□ 0.38
CPSF7-209ENST00000463244 CLDN22Q8N7P3 220 aa17.43■□□□□ 0.38
CPSF7-209ENST00000463244 TMEM239Q8WW34 195 aa17.43■□□□□ 0.38
CPSF7-209ENST00000463244 PPIAL4GP0DN37 164 aa17.42■□□□□ 0.38
CPSF7-209ENST00000463244 GSTM3P21266 225 aa17.42■□□□□ 0.38
CPSF7-209ENST00000463244 MDKP21741 143 aaPredicted RBP17.42■□□□□ 0.38
CPSF7-209ENST00000463244 CD80P33681 288 aa17.42■□□□□ 0.38
CPSF7-209ENST00000463244 MDH2P40926 338 aaKnown RBP17.42■□□□□ 0.38
CPSF7-209ENST00000463244 MTNR1AP48039 350 aa17.42■□□□□ 0.38
CPSF7-209ENST00000463244 TAS2R41P59536 307 aa17.42■□□□□ 0.38
CPSF7-209ENST00000463244 ALG10Q5BKT4 473 aa17.42■□□□□ 0.38
CPSF7-209ENST00000463244 ARL9Q6T311 187 aa17.42■□□□□ 0.38
CPSF7-209ENST00000463244 Q6ZR03 302 aa17.42■□□□□ 0.38
CPSF7-209ENST00000463244 CCDC80Q76M96 950 aa17.42■□□□□ 0.38
CPSF7-209ENST00000463244 PARP8Q8N3A8 854 aa17.42■□□□□ 0.38
CPSF7-209ENST00000463244 OR2Z1Q8NG97 314 aa17.42■□□□□ 0.38
CPSF7-209ENST00000463244 OR52E2Q8NGJ4 325 aa17.42■□□□□ 0.38
CPSF7-209ENST00000463244 OR10A6Q8NH74 314 aa17.42■□□□□ 0.38
CPSF7-209ENST00000463244 RBP7Q96R05 134 aa17.42■□□□□ 0.38
CPSF7-209ENST00000463244 POLR2J2Q9GZM3 115 aaKnown RBP17.42■□□□□ 0.38
CPSF7-209ENST00000463244 POLR2J3Q9H1A7 115 aaKnown RBP17.42■□□□□ 0.38
CPSF7-209ENST00000463244 POFUT1Q9H488 388 aa17.42■□□□□ 0.38
CPSF7-209ENST00000463244 RABEP2Q9H5N1 569 aa17.42■□□□□ 0.38
CPSF7-209ENST00000463244 TMBIM4Q9HC24 238 aa17.42■□□□□ 0.38
CPSF7-209ENST00000463244 MAN2C1Q9NTJ4 1040 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms