RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 DNAJC9Q8WXX5 260 aa11.28□□□□□ -0.6
R3HDM1-213ENST00000463230 FBXO17Q96EF6 278 aa11.28□□□□□ -0.6
R3HDM1-213ENST00000463230 NRBF2Q96F24 287 aa11.28□□□□□ -0.6
R3HDM1-213ENST00000463230 NDRG4Q9ULP0 352 aaKnown RBP11.28□□□□□ -0.6
R3HDM1-213ENST00000463230 USF3Q68DE3 2245 aa11.28□□□□□ -0.6
R3HDM1-213ENST00000463230 BHLHE40O14503 412 aa11.27□□□□□ -0.61
R3HDM1-213ENST00000463230 ERCC1P07992 297 aaPredicted RBP11.27□□□□□ -0.61
R3HDM1-213ENST00000463230 TUBG1P23258 451 aa11.27□□□□□ -0.61
R3HDM1-213ENST00000463230 PSG4Q00888 419 aa11.27□□□□□ -0.61
R3HDM1-213ENST00000463230 SLC36A3Q495N2 470 aa11.27□□□□□ -0.61
R3HDM1-213ENST00000463230 KRT80Q6KB66 452 aa11.27□□□□□ -0.61
R3HDM1-213ENST00000463230 ZBTB46Q86UZ6 589 aa11.27□□□□□ -0.61
R3HDM1-213ENST00000463230 LNX2Q8N448 690 aa11.27□□□□□ -0.61
R3HDM1-213ENST00000463230 C18orf12Q96KH6 178 aa11.27□□□□□ -0.61
R3HDM1-213ENST00000463230 COX4I2Q96KJ9 171 aa11.27□□□□□ -0.61
R3HDM1-213ENST00000463230 OCSTAMPQ9BR26 566 aa11.27□□□□□ -0.61
R3HDM1-213ENST00000463230 ZNF416Q9BWM5 594 aa11.27□□□□□ -0.61
R3HDM1-213ENST00000463230 TUBG2Q9NRH3 451 aa11.27□□□□□ -0.61
R3HDM1-213ENST00000463230 TBC1D23Q9NUY8 699 aa11.27□□□□□ -0.61
R3HDM1-213ENST00000463230 IL20RAQ9UHF4 553 aa11.27□□□□□ -0.61
R3HDM1-213ENST00000463230 KCNG2Q9UJ96 466 aa11.27□□□□□ -0.61
R3HDM1-213ENST00000463230 KLHL21Q9UJP4 597 aa11.27□□□□□ -0.61
R3HDM1-213ENST00000463230 CSMD2Q7Z408 3487 aa11.27□□□□□ -0.61
R3HDM1-213ENST00000463230 STOMP27105 288 aa11.27□□□□□ -0.61
R3HDM1-213ENST00000463230 GDI2P50395 445 aaKnown RBP11.27□□□□□ -0.61
R3HDM1-213ENST00000463230 CLEC12BQ2HXU8 276 aa11.27□□□□□ -0.61
R3HDM1-213ENST00000463230 LEG1Q6P5S2 330 aa11.27□□□□□ -0.61
R3HDM1-213ENST00000463230 VHLLQ6RSH7 139 aa11.27□□□□□ -0.61
R3HDM1-213ENST00000463230 ARL9Q6T311 187 aa11.27□□□□□ -0.61
R3HDM1-213ENST00000463230 BIVMQ86UB2 503 aa11.27□□□□□ -0.61
R3HDM1-213ENST00000463230 DUS3LQ96G46 650 aaKnown RBP11.27□□□□□ -0.61
R3HDM1-213ENST00000463230 POM121L2Q96KW2 1035 aa11.27□□□□□ -0.61
R3HDM1-213ENST00000463230 DOK1Q99704 481 aa11.27□□□□□ -0.61
R3HDM1-213ENST00000463230 NUAK2Q9H093 628 aa11.27□□□□□ -0.61
R3HDM1-213ENST00000463230 WNT5BQ9H1J7 359 aa11.27□□□□□ -0.61
R3HDM1-213ENST00000463230 EGLN3Q9H6Z9 239 aa11.27□□□□□ -0.61
R3HDM1-213ENST00000463230 EIF3KQ9UBQ5 218 aaKnown RBP11.27□□□□□ -0.61
R3HDM1-213ENST00000463230 GPR160Q9UJ42 338 aa11.27□□□□□ -0.61
R3HDM1-213ENST00000463230 ARFGEF3Q5TH69 2177 aa11.26□□□□□ -0.61
R3HDM1-213ENST00000463230 CSMD1Q96PZ7 3565 aa11.26□□□□□ -0.61
R3HDM1-213ENST00000463230 IGLV1-36A0A0B4J1U3 117 aa11.26□□□□□ -0.61
R3HDM1-213ENST00000463230 DEAF1O75398 565 aaPredicted RBP11.26□□□□□ -0.61
R3HDM1-213ENST00000463230 F12P00748 615 aaPredicted RBP11.26□□□□□ -0.61
R3HDM1-213ENST00000463230 ANXA8P13928 327 aa11.26□□□□□ -0.61
R3HDM1-213ENST00000463230 HIST1H1CP16403 213 aaKnown RBP11.26□□□□□ -0.61
R3HDM1-213ENST00000463230 ARHGDIAP52565 204 aa11.26□□□□□ -0.61
R3HDM1-213ENST00000463230 NUDT6P53370 316 aa11.26□□□□□ -0.61
R3HDM1-213ENST00000463230 SELENOVP59797 346 aa11.26□□□□□ -0.61
R3HDM1-213ENST00000463230 GLO1Q04760 184 aa11.26□□□□□ -0.61
R3HDM1-213ENST00000463230 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.26□□□□□ -0.61
R3HDM1-213ENST00000463230 MOGQ16653 247 aa11.26□□□□□ -0.61
R3HDM1-213ENST00000463230 CPEB3Q8NE35 698 aaKnown RBP11.26□□□□□ -0.61
R3HDM1-213ENST00000463230 OR2T33Q8NG76 320 aa11.26□□□□□ -0.61
R3HDM1-213ENST00000463230 HTRA1Q92743 480 aa11.26□□□□□ -0.61
R3HDM1-213ENST00000463230 RAB1BQ9H0U4 201 aa11.26□□□□□ -0.61
R3HDM1-213ENST00000463230 B9D1Q9UPM9 204 aa11.26□□□□□ -0.61
R3HDM1-213ENST00000463230 COA3Q9Y2R0 106 aaPredicted RBP11.26□□□□□ -0.61
R3HDM1-213ENST00000463230 U3KQV3 271 aa11.26□□□□□ -0.61
R3HDM1-213ENST00000463230 E2F6O75461 281 aa11.25□□□□□ -0.61
R3HDM1-213ENST00000463230 CIB2O75838 187 aa11.25□□□□□ -0.61
R3HDM1-213ENST00000463230 GAAP10253 952 aa11.25□□□□□ -0.61
R3HDM1-213ENST00000463230 RGS7BPQ6MZT1 257 aaPredicted RBP11.25□□□□□ -0.61
R3HDM1-213ENST00000463230 CCDC121Q6ZUS5 278 aa11.25□□□□□ -0.61
R3HDM1-213ENST00000463230 OR4K13Q8NH42 304 aa11.25□□□□□ -0.61
R3HDM1-213ENST00000463230 NEU4Q8WWR8 484 aaPredicted RBP11.25□□□□□ -0.61
R3HDM1-213ENST00000463230 DCLRE1CQ96SD1 692 aaKnown RBP11.25□□□□□ -0.61
R3HDM1-213ENST00000463230 NMNAT3Q96T66 252 aa11.25□□□□□ -0.61
R3HDM1-213ENST00000463230 ZNF556Q9HAH1 456 aa11.25□□□□□ -0.61
R3HDM1-213ENST00000463230 ARMC1Q9NVT9 282 aa11.25□□□□□ -0.61
R3HDM1-213ENST00000463230 TMEM129A0AVI4 362 aa11.25□□□□□ -0.61
R3HDM1-213ENST00000463230 J3QW42 95 aa11.25□□□□□ -0.61
R3HDM1-213ENST00000463230 SYNGR3O43761 229 aa11.25□□□□□ -0.61
R3HDM1-213ENST00000463230 IFNGP01579 166 aa11.25□□□□□ -0.61
R3HDM1-213ENST00000463230 FCGR1AP12314 374 aa11.25□□□□□ -0.61
R3HDM1-213ENST00000463230 ZNF250P15622 560 aa11.25□□□□□ -0.61
R3HDM1-213ENST00000463230 APEX1P27695 318 aaKnown RBP11.25□□□□□ -0.61
R3HDM1-213ENST00000463230 GRK5P34947 590 aa11.25□□□□□ -0.61
R3HDM1-213ENST00000463230 CENPAP49450 140 aa11.25□□□□□ -0.61
R3HDM1-213ENST00000463230 UCP2P55851 309 aa11.25□□□□□ -0.61
R3HDM1-213ENST00000463230 CLEC2AQ6UVW9 174 aa11.25□□□□□ -0.61
R3HDM1-213ENST00000463230 ASRGL1Q7L266 308 aa11.25□□□□□ -0.61
R3HDM1-213ENST00000463230 NPEPL1Q8NDH3 523 aa11.25□□□□□ -0.61
R3HDM1-213ENST00000463230 OR52E2Q8NGJ4 325 aa11.25□□□□□ -0.61
R3HDM1-213ENST00000463230 OR2T4Q8NH00 348 aa11.25□□□□□ -0.61
R3HDM1-213ENST00000463230 TEX47Q8TBZ9 253 aa11.25□□□□□ -0.61
R3HDM1-213ENST00000463230 C11orf40Q8WZ69 217 aa11.25□□□□□ -0.61
R3HDM1-213ENST00000463230 SLCO4A1Q96BD0 722 aa11.25□□□□□ -0.61
R3HDM1-213ENST00000463230 DDOQ99489 341 aa11.25□□□□□ -0.61
R3HDM1-213ENST00000463230 FEVQ99581 238 aa11.25□□□□□ -0.61
R3HDM1-213ENST00000463230 TSSK6Q9BXA6 273 aa11.25□□□□□ -0.61
R3HDM1-213ENST00000463230 ELOVL3Q9HB03 270 aa11.25□□□□□ -0.61
R3HDM1-213ENST00000463230 EMC7Q9NPA0 242 aa11.25□□□□□ -0.61
R3HDM1-213ENST00000463230 PDP1Q9P0J1 537 aaPredicted RBP11.25□□□□□ -0.61
R3HDM1-213ENST00000463230 GDF2Q9UK05 429 aaPredicted RBP11.25□□□□□ -0.61
R3HDM1-213ENST00000463230 SGCEO43556 437 aa11.24□□□□□ -0.61
R3HDM1-213ENST00000463230 INHBBP09529 407 aa11.24□□□□□ -0.61
R3HDM1-213ENST00000463230 BLVRAP53004 296 aa11.24□□□□□ -0.61
R3HDM1-213ENST00000463230 SLC25A1P53007 311 aa11.24□□□□□ -0.61
R3HDM1-213ENST00000463230 HIST1H3AP68431 136 aa11.24□□□□□ -0.61
R3HDM1-213ENST00000463230 HIST2H3PS2Q5TEC6 136 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms