RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 RGP1Q92546 391 aaPredicted RBP12.92□□□□□ -0.34
HDAC6-213ENST00000462730 MAP6Q96JE9 813 aa12.92□□□□□ -0.34
HDAC6-213ENST00000462730 OXGR1Q96P68 337 aa12.92□□□□□ -0.34
HDAC6-213ENST00000462730 OR8B4Q96RC9 309 aa12.92□□□□□ -0.34
HDAC6-213ENST00000462730 LRFN1Q9P244 771 aa12.92□□□□□ -0.34
HDAC6-213ENST00000462730 TRAV1-2A0A0B4J238 106 aa12.91□□□□□ -0.34
HDAC6-213ENST00000462730 A0A0G2JK05 382 aa12.91□□□□□ -0.34
HDAC6-213ENST00000462730 A0A1B0GTH9 108 aa12.91□□□□□ -0.34
HDAC6-213ENST00000462730 HSPB2A8KAH6 182 aa12.91□□□□□ -0.34
HDAC6-213ENST00000462730 RAMP1O60894 148 aa12.91□□□□□ -0.34
HDAC6-213ENST00000462730 PMS2P2O95744 297 aa12.91□□□□□ -0.34
HDAC6-213ENST00000462730 HLA-DQB1P01920 261 aa12.91□□□□□ -0.34
HDAC6-213ENST00000462730 HLA-DMAP28067 261 aa12.91□□□□□ -0.34
HDAC6-213ENST00000462730 MADCAM1Q13477 382 aa12.91□□□□□ -0.34
HDAC6-213ENST00000462730 HSPB2Q16082 182 aa12.91□□□□□ -0.34
HDAC6-213ENST00000462730 ZNF239Q16600 458 aaKnown RBP12.91□□□□□ -0.34
HDAC6-213ENST00000462730 Q5BKY6 102 aa12.91□□□□□ -0.34
HDAC6-213ENST00000462730 TMEM225Q6GV28 225 aa12.91□□□□□ -0.34
HDAC6-213ENST00000462730 SPINK14Q6IE38 97 aa12.91□□□□□ -0.34
HDAC6-213ENST00000462730 SFXN4Q6P4A7 337 aa12.91□□□□□ -0.34
HDAC6-213ENST00000462730 UNQ9370/PRO34162Q6UXP9 181 aa12.91□□□□□ -0.34
HDAC6-213ENST00000462730 SLC26A10Q8NG04 563 aa12.91□□□□□ -0.34
HDAC6-213ENST00000462730 OR5AK2Q8NH90 309 aa12.91□□□□□ -0.34
HDAC6-213ENST00000462730 ACOT12Q8WYK0 555 aa12.91□□□□□ -0.34
HDAC6-213ENST00000462730 ELOVL3Q9HB03 270 aa12.91□□□□□ -0.34
HDAC6-213ENST00000462730 FRRS1LQ9P0K9 344 aa12.91□□□□□ -0.34
HDAC6-213ENST00000462730 ABI3Q9P2A4 366 aa12.91□□□□□ -0.34
HDAC6-213ENST00000462730 KLHL13Q9P2N7 655 aa12.91□□□□□ -0.34
HDAC6-213ENST00000462730 LRRC3CA6NJW4 275 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 SLC2A2P11168 524 aaPredicted RBP12.9□□□□□ -0.34
HDAC6-213ENST00000462730 ZNF823P16415 610 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 RAB3BP20337 219 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 SRD5A2P31213 254 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 CASRP41180 1078 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 CLRN1P58418 232 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 CAMK2DQ13557 499 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 SLC17A1Q14916 467 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 HSD17B12Q53GQ0 312 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 FAM209AQ5JX71 171 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 PLET1Q6UQ28 207 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 TRILQ7L0X0 811 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 TCTE3Q8IZS6 198 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 ZNF454Q8N9F8 522 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 NOXO1Q8NFA2 376 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 OR2G2Q8NGZ5 317 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 RBP7Q96R05 134 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 PIGQQ9BRB3 760 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 NIPAL2Q9H841 368 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 NOX4Q9NPH5 578 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 DEPPQ9NTK1 212 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 RABL2AQ9UBK7 228 aaPredicted RBP12.9□□□□□ -0.34
HDAC6-213ENST00000462730 CDV3Q9UKY7 258 aaKnown RBP12.9□□□□□ -0.34
HDAC6-213ENST00000462730 MED12Q93074 2177 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 ARGFXA6NJG6 315 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 ACOD1A6NK06 481 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 ZNF879B4DU55 563 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 MTRF1O75570 445 aaKnown RBP12.9□□□□□ -0.34
HDAC6-213ENST00000462730 NEURL1O76050 574 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 IGHG1P01857 330 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 ZNF43P17038 809 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 APEX1P27695 318 aaKnown RBP12.9□□□□□ -0.34
HDAC6-213ENST00000462730 CD96P40200 585 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 MAP2K3P46734 347 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 NHLH1Q02575 133 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 TATDN3Q17R31 274 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 SLC25A35Q3KQZ1 300 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 CARD17Q5XLA6 110 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 TRIQKQ629K1 86 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 CNIH2Q6PI25 160 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 LINC00696Q6ZRV3 163 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 HDDC2Q7Z4H3 204 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 KRT77Q7Z794 578 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 YRDCQ86U90 279 aaKnown RBP12.9□□□□□ -0.34
HDAC6-213ENST00000462730 Q8N402 240 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 GALNT16Q8N428 558 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 PHYHIPQ92561 330 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 MARVELD3Q96A59 401 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 ZC3HAV1LQ96H79 300 aaKnown RBP12.9□□□□□ -0.34
HDAC6-213ENST00000462730 SIGLEC12Q96PQ1 595 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 SOSTQ9BQB4 213 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 ABHD6Q9BV23 337 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 PPP1R3EQ9H7J1 279 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 ADAM30Q9UKF2 790 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 RASD1Q9Y272 281 aa12.9□□□□□ -0.34
HDAC6-213ENST00000462730 MED13Q9UHV7 2174 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 OR4C45A6NMZ5 311 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 WNT11O96014 354 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 PGA4P0DJD7 388 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 PGA3P0DJD8 388 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 PRKAR1AP10644 381 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 THBS2P35442 1172 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 MAGEB1P43366 347 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 B3GALT5-AS1P59052 145 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 GALK2Q01415 458 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 KCTD18Q6PI47 426 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-213ENST00000462730 ZNF767PQ75MW2 155 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 SYT9Q86SS6 491 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 ZNF679Q8IYX0 411 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 ZNF676Q8N7Q3 588 aa12.89□□□□□ -0.35
HDAC6-213ENST00000462730 C19orf18Q8NEA5 215 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms