RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 SELENOVP59797 346 aa13.24□□□□□ -0.29
VARS-219ENST00000461328 TSPAN31Q12999 210 aa13.24□□□□□ -0.29
VARS-219ENST00000461328 TMEM249Q2WGJ8 235 aa13.24□□□□□ -0.29
VARS-219ENST00000461328 RFX4Q33E94 735 aa13.24□□□□□ -0.29
VARS-219ENST00000461328 OR2T5Q6IEZ7 315 aa13.24□□□□□ -0.29
VARS-219ENST00000461328 C1orf94Q6P1W5 598 aa13.24□□□□□ -0.29
VARS-219ENST00000461328 LEG1Q6P5S2 330 aa13.24□□□□□ -0.29
VARS-219ENST00000461328 ZNF620Q6ZNG0 422 aa13.24□□□□□ -0.29
VARS-219ENST00000461328 FOXL2NBQ6ZUU3 175 aa13.24□□□□□ -0.29
VARS-219ENST00000461328 PTCHD4Q6ZW05 846 aa13.24□□□□□ -0.29
VARS-219ENST00000461328 ALDH16A1Q8IZ83 802 aa13.24□□□□□ -0.29
VARS-219ENST00000461328 OR2T29Q8NH02 315 aa13.24□□□□□ -0.29
VARS-219ENST00000461328 ZNF416Q9BWM5 594 aa13.24□□□□□ -0.29
VARS-219ENST00000461328 OR2H1Q9GZK4 316 aa13.24□□□□□ -0.29
VARS-219ENST00000461328 TPK1Q9H3S4 243 aa13.24□□□□□ -0.29
VARS-219ENST00000461328 EIF3KQ9UBQ5 218 aaKnown RBP13.24□□□□□ -0.29
VARS-219ENST00000461328 DUSP13Q9UII6 198 aa13.24□□□□□ -0.29
VARS-219ENST00000461328 TIMM10BQ9Y5J6 103 aa13.24□□□□□ -0.29
VARS-219ENST00000461328 U3KQV3 271 aa13.24□□□□□ -0.29
VARS-219ENST00000461328 LOC390937A0A1W2PQ73 354 aa13.23□□□□□ -0.29
VARS-219ENST00000461328 TMEM129A0AVI4 362 aa13.23□□□□□ -0.29
VARS-219ENST00000461328 C5orf49A4QMS7 147 aa13.23□□□□□ -0.29
VARS-219ENST00000461328 SYNGR3O43761 229 aa13.23□□□□□ -0.29
VARS-219ENST00000461328 CRLF1O75462 422 aa13.23□□□□□ -0.29
VARS-219ENST00000461328 SNAP29O95721 258 aa13.23□□□□□ -0.29
VARS-219ENST00000461328 TXNDC12O95881 172 aa13.23□□□□□ -0.29
VARS-219ENST00000461328 ADRA2AP08913 450 aa13.23□□□□□ -0.29
VARS-219ENST00000461328 RAP2AP10114 183 aa13.23□□□□□ -0.29
VARS-219ENST00000461328 APEHP13798 732 aaKnown RBP13.23□□□□□ -0.29
VARS-219ENST00000461328 RAD52P43351 418 aa13.23□□□□□ -0.29
VARS-219ENST00000461328 PSG4Q00888 419 aa13.23□□□□□ -0.29
VARS-219ENST00000461328 SCRN3Q0VDG4 424 aa13.23□□□□□ -0.29
VARS-219ENST00000461328 TRAP1Q12931 704 aaKnown RBP13.23□□□□□ -0.29
VARS-219ENST00000461328 PPP1R8Q12972 351 aaKnown RBP13.23□□□□□ -0.29
VARS-219ENST00000461328 ENDOGQ14249 297 aaKnown RBP13.23□□□□□ -0.29
VARS-219ENST00000461328 FLOT2Q14254 428 aa13.23□□□□□ -0.29
VARS-219ENST00000461328 GGTLC2Q14390 218 aa13.23□□□□□ -0.29
VARS-219ENST00000461328 NKPD1Q17RQ9 610 aa13.23□□□□□ -0.29
VARS-219ENST00000461328 MSMPQ1L6U9 139 aa13.23□□□□□ -0.29
VARS-219ENST00000461328 CLEC12AQ5QGZ9 265 aa13.23□□□□□ -0.29
VARS-219ENST00000461328 RPL13AP3Q6NVV1 102 aa13.23□□□□□ -0.29
VARS-219ENST00000461328 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.23□□□□□ -0.29
VARS-219ENST00000461328 SPATA24Q86W54 205 aa13.23□□□□□ -0.29
VARS-219ENST00000461328 GLB1L2Q8IW92 636 aa13.23□□□□□ -0.29
VARS-219ENST00000461328 AQP11Q8NBQ7 271 aa13.23□□□□□ -0.29
VARS-219ENST00000461328 CPEB3Q8NE35 698 aaKnown RBP13.23□□□□□ -0.29
VARS-219ENST00000461328 NEU4Q8WWR8 484 aaPredicted RBP13.23□□□□□ -0.29
VARS-219ENST00000461328 BTBD10Q9BSF8 475 aa13.23□□□□□ -0.29
VARS-219ENST00000461328 BCL2L14Q9BZR8 327 aa13.23□□□□□ -0.29
VARS-219ENST00000461328 WNT5BQ9H1J7 359 aa13.23□□□□□ -0.29
VARS-219ENST00000461328 TBC1D23Q9NUY8 699 aa13.23□□□□□ -0.29
VARS-219ENST00000461328 VSX1Q9NZR4 365 aaPredicted RBP13.23□□□□□ -0.29
VARS-219ENST00000461328 COA3Q9Y2R0 106 aaPredicted RBP13.23□□□□□ -0.29
VARS-219ENST00000461328 CDH10Q9Y6N8 788 aa13.23□□□□□ -0.29
VARS-219ENST00000461328 DHRS12A0PJE2 317 aa13.22□□□□□ -0.29
VARS-219ENST00000461328 A8MV72 311 aaPredicted RBP13.22□□□□□ -0.29
VARS-219ENST00000461328 VWC2LB2RUY7 222 aa13.22□□□□□ -0.29
VARS-219ENST00000461328 IMPA2O14732 288 aa13.22□□□□□ -0.29
VARS-219ENST00000461328 DOK2O60496 412 aa13.22□□□□□ -0.29
VARS-219ENST00000461328 DNAJC8O75937 253 aaPredicted RBP13.22□□□□□ -0.29
VARS-219ENST00000461328 DAOP14920 347 aa13.22□□□□□ -0.29
VARS-219ENST00000461328 CRABP1P29762 137 aa13.22□□□□□ -0.29
VARS-219ENST00000461328 CDKN2AP42771 156 aaKnown RBP13.22□□□□□ -0.29
VARS-219ENST00000461328 ALDH3B1P43353 468 aa13.22□□□□□ -0.29
VARS-219ENST00000461328 NR4A2P43354 598 aa13.22□□□□□ -0.29
VARS-219ENST00000461328 EVX1P49640 407 aa13.22□□□□□ -0.29
VARS-219ENST00000461328 KLF3P57682 345 aaPredicted RBP13.22□□□□□ -0.29
VARS-219ENST00000461328 ERVS71-1P61550 626 aa13.22□□□□□ -0.29
VARS-219ENST00000461328 MAD2L1BPQ15013 274 aaPredicted RBP13.22□□□□□ -0.29
VARS-219ENST00000461328 ZNF774Q6NX45 483 aa13.22□□□□□ -0.29
VARS-219ENST00000461328 UGT2A3Q6UWM9 527 aa13.22□□□□□ -0.29
VARS-219ENST00000461328 UNQ6126/PRO20091Q6UXV3 157 aa13.22□□□□□ -0.29
VARS-219ENST00000461328 LRP11Q86VZ4 500 aa13.22□□□□□ -0.29
VARS-219ENST00000461328 PRIMA1Q86XR5 153 aa13.22□□□□□ -0.29
VARS-219ENST00000461328 ZCCHC24Q8N2G6 241 aaKnown RBP13.22□□□□□ -0.29
VARS-219ENST00000461328 OR4C15Q8NGM1 316 aa13.22□□□□□ -0.29
VARS-219ENST00000461328 OR4K13Q8NH42 304 aa13.22□□□□□ -0.29
VARS-219ENST00000461328 C11orf40Q8WZ69 217 aa13.22□□□□□ -0.29
VARS-219ENST00000461328 NMNAT3Q96T66 252 aa13.22□□□□□ -0.29
VARS-219ENST00000461328 CHID1Q9BWS9 393 aa13.22□□□□□ -0.29
VARS-219ENST00000461328 NUAK2Q9H093 628 aa13.22□□□□□ -0.29
VARS-219ENST00000461328 EGLN3Q9H6Z9 239 aa13.22□□□□□ -0.29
VARS-219ENST00000461328 VNN3Q9NY84 501 aa13.22□□□□□ -0.29
VARS-219ENST00000461328 REV1Q9UBZ9 1251 aa13.22□□□□□ -0.29
VARS-219ENST00000461328 NDRG4Q9ULP0 352 aaKnown RBP13.22□□□□□ -0.29
VARS-219ENST00000461328 AQP12BA6NM10 295 aa13.21□□□□□ -0.29
VARS-219ENST00000461328 GNGT2O14610 69 aa13.21□□□□□ -0.29
VARS-219ENST00000461328 ACOT8O14734 319 aa13.21□□□□□ -0.29
VARS-219ENST00000461328 ARPC3O15145 178 aa13.21□□□□□ -0.29
VARS-219ENST00000461328 CST1P01037 141 aa13.21□□□□□ -0.29
VARS-219ENST00000461328 SCG5P05408 212 aa13.21□□□□□ -0.29
VARS-219ENST00000461328 HIST1H1CP16403 213 aaKnown RBP13.21□□□□□ -0.29
VARS-219ENST00000461328 HTR5AP47898 357 aa13.21□□□□□ -0.29
VARS-219ENST00000461328 HMGA2P52926 109 aa13.21□□□□□ -0.29
VARS-219ENST00000461328 UCP2P55851 309 aa13.21□□□□□ -0.29
VARS-219ENST00000461328 AQP6Q13520 282 aa13.21□□□□□ -0.29
VARS-219ENST00000461328 ALKBH6Q3KRA9 238 aa13.21□□□□□ -0.29
VARS-219ENST00000461328 SPATA46Q5T0L3 261 aa13.21□□□□□ -0.29
VARS-219ENST00000461328 SLC35F1Q5T1Q4 408 aa13.21□□□□□ -0.29
VARS-219ENST00000461328 C6orf52Q5T4I8 152 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms