RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 FBXO9Q9UK97 447 aaPredicted RBP11.48□□□□□ -0.57
RAB11FIP3-207ENST00000461009 UGT2A1Q9Y4X1 527 aa11.48□□□□□ -0.57
RAB11FIP3-207ENST00000461009 ZNF503-AS2A6NEH8 195 aa11.47□□□□□ -0.57
RAB11FIP3-207ENST00000461009 INAFM1C9JVW0 142 aa11.47□□□□□ -0.57
RAB11FIP3-207ENST00000461009 G3V2T6 193 aa11.47□□□□□ -0.57
RAB11FIP3-207ENST00000461009 BHLHE40O14503 412 aa11.47□□□□□ -0.57
RAB11FIP3-207ENST00000461009 IFNGP01579 166 aa11.47□□□□□ -0.57
RAB11FIP3-207ENST00000461009 SERPINA5P05154 406 aa11.47□□□□□ -0.57
RAB11FIP3-207ENST00000461009 CSF3P09919 207 aa11.47□□□□□ -0.57
RAB11FIP3-207ENST00000461009 PATE4P0C8F1 98 aa11.47□□□□□ -0.57
RAB11FIP3-207ENST00000461009 ZNF14P17017 642 aaPredicted RBP11.47□□□□□ -0.57
RAB11FIP3-207ENST00000461009 PRKACGP22612 351 aa11.47□□□□□ -0.57
RAB11FIP3-207ENST00000461009 CENPAP49450 140 aa11.47□□□□□ -0.57
RAB11FIP3-207ENST00000461009 SNRPD2P62316 118 aaKnown RBP11.47□□□□□ -0.57
RAB11FIP3-207ENST00000461009 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.47□□□□□ -0.57
RAB11FIP3-207ENST00000461009 RAB39AQ14964 217 aa11.47□□□□□ -0.57
RAB11FIP3-207ENST00000461009 KPNB1Q14974 876 aaKnown RBP11.47□□□□□ -0.57
RAB11FIP3-207ENST00000461009 FOXL2NBQ6ZUU3 175 aa11.47□□□□□ -0.57
RAB11FIP3-207ENST00000461009 PTCHD4Q6ZW05 846 aa11.47□□□□□ -0.57
RAB11FIP3-207ENST00000461009 ZDHHC13Q8IUH4 622 aa11.47□□□□□ -0.57
RAB11FIP3-207ENST00000461009 SVOPLQ8N434 492 aa11.47□□□□□ -0.57
RAB11FIP3-207ENST00000461009 LNX2Q8N448 690 aa11.47□□□□□ -0.57
RAB11FIP3-207ENST00000461009 NABP1Q96AH0 204 aa11.47□□□□□ -0.57
RAB11FIP3-207ENST00000461009 NMNAT3Q96T66 252 aa11.47□□□□□ -0.57
RAB11FIP3-207ENST00000461009 NUAK2Q9H093 628 aa11.47□□□□□ -0.57
RAB11FIP3-207ENST00000461009 NTN4Q9HB63 628 aa11.47□□□□□ -0.57
RAB11FIP3-207ENST00000461009 KLHL21Q9UJP4 597 aa11.47□□□□□ -0.57
RAB11FIP3-207ENST00000461009 TIMM10BQ9Y5J6 103 aa11.47□□□□□ -0.57
RAB11FIP3-207ENST00000461009 FKBP7Q9Y680 259 aa11.47□□□□□ -0.57
RAB11FIP3-207ENST00000461009 IGHV2OR16-5A0A0B4J2B6 119 aa11.46□□□□□ -0.57
RAB11FIP3-207ENST00000461009 ATP6V1G2-DDX39BF2Z307 99 aa11.46□□□□□ -0.57
RAB11FIP3-207ENST00000461009 H7C417 338 aa11.46□□□□□ -0.57
RAB11FIP3-207ENST00000461009 TLX2O43763 284 aaPredicted RBP11.46□□□□□ -0.57
RAB11FIP3-207ENST00000461009 SOX14O95416 240 aa11.46□□□□□ -0.57
RAB11FIP3-207ENST00000461009 CELA3BP08861 270 aa11.46□□□□□ -0.57
RAB11FIP3-207ENST00000461009 OSMP13725 252 aa11.46□□□□□ -0.57
RAB11FIP3-207ENST00000461009 CTLA4P16410 223 aa11.46□□□□□ -0.57
RAB11FIP3-207ENST00000461009 ZNF23P17027 643 aa11.46□□□□□ -0.57
RAB11FIP3-207ENST00000461009 POU1F1P28069 291 aa11.46□□□□□ -0.57
RAB11FIP3-207ENST00000461009 LSM6P62312 80 aaKnown RBP11.46□□□□□ -0.57
RAB11FIP3-207ENST00000461009 GALK2Q01415 458 aa11.46□□□□□ -0.57
RAB11FIP3-207ENST00000461009 GLO1Q04760 184 aa11.46□□□□□ -0.57
RAB11FIP3-207ENST00000461009 GABPB1Q06547 395 aaPredicted RBP11.46□□□□□ -0.57
RAB11FIP3-207ENST00000461009 SLC36A3Q495N2 470 aa11.46□□□□□ -0.57
RAB11FIP3-207ENST00000461009 C11orf71Q6IPW1 123 aa11.46□□□□□ -0.57
RAB11FIP3-207ENST00000461009 AMIGO2Q86SJ2 522 aa11.46□□□□□ -0.57
RAB11FIP3-207ENST00000461009 NPEPL1Q8NDH3 523 aa11.46□□□□□ -0.57
RAB11FIP3-207ENST00000461009 FGFBP3Q8TAT2 258 aa11.46□□□□□ -0.57
RAB11FIP3-207ENST00000461009 LRTOMTQ8WZ04 291 aa11.46□□□□□ -0.57
RAB11FIP3-207ENST00000461009 CENPNQ96H22 339 aaPredicted RBP11.46□□□□□ -0.57
RAB11FIP3-207ENST00000461009 ZNF75AQ96N20 296 aa11.46□□□□□ -0.57
RAB11FIP3-207ENST00000461009 PLA2G12AQ9BZM1 189 aa11.46□□□□□ -0.57
RAB11FIP3-207ENST00000461009 POLE4Q9NR33 117 aa11.46□□□□□ -0.57
RAB11FIP3-207ENST00000461009 REV1Q9UBZ9 1251 aa11.46□□□□□ -0.57
RAB11FIP3-207ENST00000461009 B9D1Q9UPM9 204 aa11.46□□□□□ -0.57
RAB11FIP3-207ENST00000461009 COA3Q9Y2R0 106 aaPredicted RBP11.46□□□□□ -0.57
RAB11FIP3-207ENST00000461009 RIIAD1A6NNX1 92 aa11.45□□□□□ -0.58
RAB11FIP3-207ENST00000461009 NDUFS7O75251 213 aa11.45□□□□□ -0.58
RAB11FIP3-207ENST00000461009 HMGN1P05114 100 aa11.45□□□□□ -0.58
RAB11FIP3-207ENST00000461009 ERCC1P07992 297 aaPredicted RBP11.45□□□□□ -0.58
RAB11FIP3-207ENST00000461009 MMP7P09237 267 aaPredicted RBP11.45□□□□□ -0.58
RAB11FIP3-207ENST00000461009 SLC25A16P16260 332 aa11.45□□□□□ -0.58
RAB11FIP3-207ENST00000461009 ZNF32P17041 273 aa11.45□□□□□ -0.58
RAB11FIP3-207ENST00000461009 GRK5P34947 590 aa11.45□□□□□ -0.58
RAB11FIP3-207ENST00000461009 APLNRP35414 380 aa11.45□□□□□ -0.58
RAB11FIP3-207ENST00000461009 SERPINF1P36955 418 aa11.45□□□□□ -0.58
RAB11FIP3-207ENST00000461009 EFNA4P52798 201 aa11.45□□□□□ -0.58
RAB11FIP3-207ENST00000461009 TBC1D28Q2M2D7 210 aa11.45□□□□□ -0.58
RAB11FIP3-207ENST00000461009 SLC27A4Q6P1M0 643 aa11.45□□□□□ -0.58
RAB11FIP3-207ENST00000461009 B3GLCTQ6Y288 498 aa11.45□□□□□ -0.58
RAB11FIP3-207ENST00000461009 ZBTB46Q86UZ6 589 aa11.45□□□□□ -0.58
RAB11FIP3-207ENST00000461009 HS3ST5Q8IZT8 346 aa11.45□□□□□ -0.58
RAB11FIP3-207ENST00000461009 MAPK1IP1LQ8NDC0 245 aa11.45□□□□□ -0.58
RAB11FIP3-207ENST00000461009 SLC30A7Q8NEW0 376 aa11.45□□□□□ -0.58
RAB11FIP3-207ENST00000461009 SDR9C7Q8NEX9 313 aa11.45□□□□□ -0.58
RAB11FIP3-207ENST00000461009 NUP37Q8NFH4 326 aa11.45□□□□□ -0.58
RAB11FIP3-207ENST00000461009 OR8D4Q8NGM9 314 aa11.45□□□□□ -0.58
RAB11FIP3-207ENST00000461009 OR2T4Q8NH00 348 aa11.45□□□□□ -0.58
RAB11FIP3-207ENST00000461009 PYDC1Q8WXC3 89 aa11.45□□□□□ -0.58
RAB11FIP3-207ENST00000461009 FAM168AQ92567 244 aa11.45□□□□□ -0.58
RAB11FIP3-207ENST00000461009 HTRA1Q92743 480 aa11.45□□□□□ -0.58
RAB11FIP3-207ENST00000461009 FBXO17Q96EF6 278 aa11.45□□□□□ -0.58
RAB11FIP3-207ENST00000461009 ZNF416Q9BWM5 594 aa11.45□□□□□ -0.58
RAB11FIP3-207ENST00000461009 RACGAP1Q9H0H5 632 aa11.45□□□□□ -0.58
RAB11FIP3-207ENST00000461009 CDH20Q9HBT6 801 aa11.45□□□□□ -0.58
RAB11FIP3-207ENST00000461009 RPRD1BQ9NQG5 326 aaKnown RBP11.45□□□□□ -0.58
RAB11FIP3-207ENST00000461009 PAPOLBQ9NRJ5 636 aaKnown RBP11.45□□□□□ -0.58
RAB11FIP3-207ENST00000461009 ENOPH1Q9UHY7 261 aa11.45□□□□□ -0.58
RAB11FIP3-207ENST00000461009 RTTNQ86VV8 2226 aa11.45□□□□□ -0.58
RAB11FIP3-207ENST00000461009 NAV3Q8IVL0 2385 aa11.45□□□□□ -0.58
RAB11FIP3-207ENST00000461009 HIVEP2P31629 2446 aa11.44□□□□□ -0.58
RAB11FIP3-207ENST00000461009 OR6C68A6NDL8 312 aa11.44□□□□□ -0.58
RAB11FIP3-207ENST00000461009 B9A039 149 aa11.44□□□□□ -0.58
RAB11FIP3-207ENST00000461009 CD5LO43866 347 aa11.44□□□□□ -0.58
RAB11FIP3-207ENST00000461009 F12P00748 615 aaPredicted RBP11.44□□□□□ -0.58
RAB11FIP3-207ENST00000461009 HLA-DQA2P01906 255 aa11.44□□□□□ -0.58
RAB11FIP3-207ENST00000461009 IGFBP1P08833 259 aaPredicted RBP11.44□□□□□ -0.58
RAB11FIP3-207ENST00000461009 ZNF35P13682 527 aa11.44□□□□□ -0.58
RAB11FIP3-207ENST00000461009 ZNF3P17036 446 aa11.44□□□□□ -0.58
RAB11FIP3-207ENST00000461009 NR4A1P22736 598 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms