RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 ZFP1Q6P2D0 407 aa12.71□□□□□ -0.37
NCK1-202ENST00000460960 C12orf54Q6X4T0 127 aa12.71□□□□□ -0.37
NCK1-202ENST00000460960 ATG16L2Q8NAA4 619 aa12.71□□□□□ -0.37
NCK1-202ENST00000460960 OR4K13Q8NH42 304 aa12.71□□□□□ -0.37
NCK1-202ENST00000460960 FGFBP3Q8TAT2 258 aa12.71□□□□□ -0.37
NCK1-202ENST00000460960 NRBF2Q96F24 287 aa12.71□□□□□ -0.37
NCK1-202ENST00000460960 C1orf159Q96HA4 380 aa12.71□□□□□ -0.37
NCK1-202ENST00000460960 TSSK2Q96PF2 358 aa12.71□□□□□ -0.37
NCK1-202ENST00000460960 VRK1Q99986 396 aaPredicted RBP12.71□□□□□ -0.37
NCK1-202ENST00000460960 TSSK6Q9BXA6 273 aa12.71□□□□□ -0.37
NCK1-202ENST00000460960 FN3KQ9H479 309 aa12.71□□□□□ -0.37
NCK1-202ENST00000460960 TMEFF2Q9UIK5 374 aaPredicted RBP12.71□□□□□ -0.37
NCK1-202ENST00000460960 ARFGEF3Q5TH69 2177 aa12.7□□□□□ -0.38
NCK1-202ENST00000460960 PRSS37A4D1T9 235 aa12.7□□□□□ -0.38
NCK1-202ENST00000460960 A6NIZ1 184 aa12.7□□□□□ -0.38
NCK1-202ENST00000460960 ATP6V1G2-DDX39BF2Z307 99 aa12.7□□□□□ -0.38
NCK1-202ENST00000460960 G3V2T6 193 aa12.7□□□□□ -0.38
NCK1-202ENST00000460960 GPANK1O95872 356 aa12.7□□□□□ -0.38
NCK1-202ENST00000460960 PATE4P0C8F1 98 aa12.7□□□□□ -0.38
NCK1-202ENST00000460960 CTLA4P16410 223 aa12.7□□□□□ -0.38
NCK1-202ENST00000460960 GSTM3P21266 225 aa12.7□□□□□ -0.38
NCK1-202ENST00000460960 EPHA2P29317 976 aa12.7□□□□□ -0.38
NCK1-202ENST00000460960 RAP1BP61224 184 aa12.7□□□□□ -0.38
NCK1-202ENST00000460960 RAP1AP62834 184 aa12.7□□□□□ -0.38
NCK1-202ENST00000460960 TMEM236Q5W0B7 351 aa12.7□□□□□ -0.38
NCK1-202ENST00000460960 OR7E24Q6IFN5 339 aa12.7□□□□□ -0.38
NCK1-202ENST00000460960 ANKRD16Q6P6B7 361 aa12.7□□□□□ -0.38
NCK1-202ENST00000460960 ZNF813Q6ZN06 617 aa12.7□□□□□ -0.38
NCK1-202ENST00000460960 ABHD12BQ7Z5M8 362 aaPredicted RBP12.7□□□□□ -0.38
NCK1-202ENST00000460960 MYPOPQ86VE0 399 aaPredicted RBP12.7□□□□□ -0.38
NCK1-202ENST00000460960 C1orf162Q8NEQ5 155 aaPredicted RBP12.7□□□□□ -0.38
NCK1-202ENST00000460960 SDR9C7Q8NEX9 313 aa12.7□□□□□ -0.38
NCK1-202ENST00000460960 SORCS2Q96PQ0 1159 aa12.7□□□□□ -0.38
NCK1-202ENST00000460960 NMNAT3Q96T66 252 aa12.7□□□□□ -0.38
NCK1-202ENST00000460960 FOXB1Q99853 325 aa12.7□□□□□ -0.38
NCK1-202ENST00000460960 ALG12Q9BV10 488 aa12.7□□□□□ -0.38
NCK1-202ENST00000460960 GABARAPL1Q9H0R8 117 aa12.7□□□□□ -0.38
NCK1-202ENST00000460960 SYT4Q9H2B2 425 aa12.7□□□□□ -0.38
NCK1-202ENST00000460960 SEC61A2Q9H9S3 476 aa12.7□□□□□ -0.38
NCK1-202ENST00000460960 B3GAT2Q9NPZ5 323 aa12.7□□□□□ -0.38
NCK1-202ENST00000460960 TMEM38BQ9NVV0 291 aa12.7□□□□□ -0.38
NCK1-202ENST00000460960 OR6C68A6NDL8 312 aa12.69□□□□□ -0.38
NCK1-202ENST00000460960 VWC2LB2RUY7 222 aa12.69□□□□□ -0.38
NCK1-202ENST00000460960 NDUFS8O00217 210 aa12.69□□□□□ -0.38
NCK1-202ENST00000460960 ARPC3O15145 178 aa12.69□□□□□ -0.38
NCK1-202ENST00000460960 HLA-HP01893 362 aa12.69□□□□□ -0.38
NCK1-202ENST00000460960 ANXA8P13928 327 aa12.69□□□□□ -0.38
NCK1-202ENST00000460960 POU1F1P28069 291 aa12.69□□□□□ -0.38
NCK1-202ENST00000460960 RPS6KA3P51812 740 aa12.69□□□□□ -0.38
NCK1-202ENST00000460960 SNRPD2P62316 118 aaKnown RBP12.69□□□□□ -0.38
NCK1-202ENST00000460960 TGFBR3Q03167 851 aa12.69□□□□□ -0.38
NCK1-202ENST00000460960 C10orf128Q5T292 105 aa12.69□□□□□ -0.38
NCK1-202ENST00000460960 FAM205BPQ63HN1 556 aa12.69□□□□□ -0.38
NCK1-202ENST00000460960 GPR139Q6DWJ6 353 aa12.69□□□□□ -0.38
NCK1-202ENST00000460960 ACSM5Q6NUN0 579 aa12.69□□□□□ -0.38
NCK1-202ENST00000460960 LEG1Q6P5S2 330 aa12.69□□□□□ -0.38
NCK1-202ENST00000460960 SKA3Q8IX90 412 aa12.69□□□□□ -0.38
NCK1-202ENST00000460960 PQLC1Q8N2U9 271 aa12.69□□□□□ -0.38
NCK1-202ENST00000460960 CYB561A3Q8NBI2 242 aa12.69□□□□□ -0.38
NCK1-202ENST00000460960 ZNRF4Q8WWF5 429 aa12.69□□□□□ -0.38
NCK1-202ENST00000460960 NABP1Q96AH0 204 aa12.69□□□□□ -0.38
NCK1-202ENST00000460960 BOD1Q96IK1 185 aa12.69□□□□□ -0.38
NCK1-202ENST00000460960 DDOQ99489 341 aa12.69□□□□□ -0.38
NCK1-202ENST00000460960 CIB1Q99828 191 aa12.69□□□□□ -0.38
NCK1-202ENST00000460960 SH3GL3Q99963 347 aa12.69□□□□□ -0.38
NCK1-202ENST00000460960 VSX1Q9NZR4 365 aaPredicted RBP12.69□□□□□ -0.38
NCK1-202ENST00000460960 MOKQ9UQ07 419 aa12.69□□□□□ -0.38
NCK1-202ENST00000460960 POFUT2Q9Y2G5 429 aa12.69□□□□□ -0.38
NCK1-202ENST00000460960 CENPBD1B2RD01 187 aa12.68□□□□□ -0.38
NCK1-202ENST00000460960 H3BN98 237 aa12.68□□□□□ -0.38
NCK1-202ENST00000460960 MPZL1O95297 269 aa12.68□□□□□ -0.38
NCK1-202ENST00000460960 BAG2O95816 211 aa12.68□□□□□ -0.38
NCK1-202ENST00000460960 CELA3BP08861 270 aa12.68□□□□□ -0.38
NCK1-202ENST00000460960 OSMP13725 252 aa12.68□□□□□ -0.38
NCK1-202ENST00000460960 POLR2IP36954 125 aaKnown RBP12.68□□□□□ -0.38
NCK1-202ENST00000460960 SH3BGRP55822 239 aaPredicted RBP12.68□□□□□ -0.38
NCK1-202ENST00000460960 ELF3P78545 371 aaPredicted RBP12.68□□□□□ -0.38
NCK1-202ENST00000460960 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.68□□□□□ -0.38
NCK1-202ENST00000460960 COX10Q12887 443 aa12.68□□□□□ -0.38
NCK1-202ENST00000460960 KDM4DQ6B0I6 523 aa12.68□□□□□ -0.38
NCK1-202ENST00000460960 ZNF627Q7L945 461 aa12.68□□□□□ -0.38
NCK1-202ENST00000460960 HDDC2Q7Z4H3 204 aa12.68□□□□□ -0.38
NCK1-202ENST00000460960 ZDHHC13Q8IUH4 622 aa12.68□□□□□ -0.38
NCK1-202ENST00000460960 SVOPLQ8N434 492 aa12.68□□□□□ -0.38
NCK1-202ENST00000460960 LNX2Q8N448 690 aa12.68□□□□□ -0.38
NCK1-202ENST00000460960 RFLNBQ8N5W9 214 aa12.68□□□□□ -0.38
NCK1-202ENST00000460960 NPEPL1Q8NDH3 523 aa12.68□□□□□ -0.38
NCK1-202ENST00000460960 OR52L1Q8NGH7 329 aa12.68□□□□□ -0.38
NCK1-202ENST00000460960 OR52E2Q8NGJ4 325 aa12.68□□□□□ -0.38
NCK1-202ENST00000460960 KCNS3Q9BQ31 491 aa12.68□□□□□ -0.38
NCK1-202ENST00000460960 NDEL1Q9GZM8 345 aa12.68□□□□□ -0.38
NCK1-202ENST00000460960 NUAK2Q9H093 628 aa12.68□□□□□ -0.38
NCK1-202ENST00000460960 RERGLQ9H628 205 aa12.68□□□□□ -0.38
NCK1-202ENST00000460960 PAPOLBQ9NRJ5 636 aaKnown RBP12.68□□□□□ -0.38
NCK1-202ENST00000460960 KIF17Q9P2E2 1029 aa12.68□□□□□ -0.38
NCK1-202ENST00000460960 AMDHD2Q9Y303 409 aa12.68□□□□□ -0.38
NCK1-202ENST00000460960 SVEP1Q4LDE5 3571 aa12.67□□□□□ -0.38
NCK1-202ENST00000460960 LOC390937A0A1W2PQ73 354 aa12.67□□□□□ -0.38
NCK1-202ENST00000460960 LRP5LA4QPB2 252 aa12.67□□□□□ -0.38
NCK1-202ENST00000460960 M0R129 80 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms