RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 AKR1D1P51857 326 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 RAB38P57729 211 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 CARD18P57730 90 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 SKP1P63208 163 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 MRPS22P82650 360 aaKnown RBP4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 DEFA6Q01524 100 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 ACSM2AQ08AH3 577 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 C2orf80Q0P641 193 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 GPR50Q13585 617 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 EXOSC7Q15024 291 aaKnown RBP4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 KIAA0040Q15053 153 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 ZMYND11Q15326 602 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 NSDHLQ15738 373 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 ADIPOQQ15848 244 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 MICBQ29980 383 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 MAJINQ3KP22 176 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 LINC00303Q3SY05 128 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 TMEM35AQ53FP2 167 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 KLHL26Q53HC5 615 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 XKR7Q5GH72 579 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 RBM48Q5RL73 367 aaKnown RBP4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 C6orf136Q5SQH8 315 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 C6orf141Q5SZD1 244 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 PDZK1Q5T2W1 519 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 ACSM2BQ68CK6 577 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 NOXRED1Q6NXP6 359 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 NPSR1Q6W5P4 371 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 TMEM64Q6YI46 380 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 GALNTL5Q7Z4T8 443 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 ANKRD37Q7Z713 158 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 HAPLN4Q86UW8 402 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 COMMD7Q86VX2 200 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 NUDT13Q86X67 352 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 ZDHHC23Q8IYP9 409 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 FAM185AQ8N0U4 392 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 GDPD1Q8N9F7 314 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 KBTBD8Q8NFY9 601 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 OR9I1Q8NGQ6 314 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 OR6X1Q8NH79 312 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 EXOSC8Q96B26 276 aaKnown RBP4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 OTUB1Q96FW1 271 aaPredicted RBP4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 FAM71F1Q96KD3 344 aaPredicted RBP4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 TEX37Q96LM6 180 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 GPR137Q96N19 417 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 KCTD14Q9BQ13 255 aaPredicted RBP4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 UCK2Q9BZX2 261 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 NMUR2Q9GZQ4 415 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 CCDC90BQ9GZT6 254 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 ILKAPQ9H0C8 392 aaPredicted RBP4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 SLC26A1Q9H2B4 701 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 DDX31Q9H8H2 851 aaKnown RBP4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 MKKSQ9NPJ1 570 aaPredicted RBP4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 ZNF71Q9NQZ8 489 aaPredicted RBP4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 PRTFDC1Q9NRG1 225 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 DECR2Q9NUI1 292 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 LYARQ9NX58 379 aaKnown RBP4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 TREM2Q9NZC2 230 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 ZNF224Q9NZL3 707 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 DNAJB9Q9UBS3 223 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 PURGQ9UJV8 347 aaKnown RBP4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 ZNF223Q9UK11 482 aaPredicted RBP4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 CES1P1Q9UKY3 287 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 PPIEQ9UNP9 301 aaKnown RBP4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 RAP2CQ9Y3L5 183 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 CSAG2Q9Y5P2 127 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 CRYBG3Q68DQ2 2970 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 NINQ8N4C6 2090 aa4.3□□□□□ -1.72
ATPAF1-203ENST00000460928 PDZD2O15018 2839 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 A0A1B0GW55 424 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 OR6C70A6NIJ9 312 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 RFPL4AA6NLU0 287 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 C21orf140B9A014 251 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 RFPL4AL1F8VTS6 287 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 H0YAE9 185 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 M0R3G1 203 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 SLC28A1O00337 649 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 SULT1C2O00338 296 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 HSPB6O14558 160 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 GPR171O14626 319 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 ITGB1BP1O14713 200 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 ZNF354AO60765 605 aaPredicted RBP4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 CTNSO60931 367 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 MITFO75030 526 aaPredicted RBP4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 BCAS2O75934 225 aaPredicted RBP4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 WISP2O76076 250 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 RPP14O95059 124 aaKnown RBP4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 SCELO95171 688 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 MBP02144 154 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 CLPSP04118 112 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 ALPPP05187 535 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 ACAA1P09110 424 aaPredicted RBP4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 OR4E1P0C645 316 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 DUX4L2P0CJ85 424 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 DUX4L3P0CJ86 424 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 DUX4L4P0CJ87 422 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 DUX4L5P0CJ88 424 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 DUX4L6P0CJ89 424 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 DUX4L7P0CJ90 424 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 LAMP1P11279 417 aa4.29□□□□□ -1.72
ATPAF1-203ENST00000460928 AGAP20933 346 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms