RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 ZNF441Q8N8Z8 693 aa16.26■□□□□ 0.19
HPS3-202ENST00000460120 TRAF4Q9BUZ4 470 aaPredicted RBP16.26■□□□□ 0.19
HPS3-202ENST00000460120 MS4A18H0YCH9 400 aa16.26■□□□□ 0.19
HPS3-202ENST00000460120 TNFRSF10AO00220 468 aa16.26■□□□□ 0.19
HPS3-202ENST00000460120 TO15178 435 aa16.26■□□□□ 0.19
HPS3-202ENST00000460120 LIPCP11150 499 aa16.26■□□□□ 0.19
HPS3-202ENST00000460120 AFF3P51826 1226 aaKnown RBP16.26■□□□□ 0.19
HPS3-202ENST00000460120 SMAD4Q13485 552 aaKnown RBP16.26■□□□□ 0.19
HPS3-202ENST00000460120 MS4A18Q3C1V0 323 aa16.26■□□□□ 0.19
HPS3-202ENST00000460120 DMRTC1Q5HYR2 192 aa16.26■□□□□ 0.19
HPS3-202ENST00000460120 ELFN2Q5R3F8 820 aa16.26■□□□□ 0.19
HPS3-202ENST00000460120 CARD17Q5XLA6 110 aa16.26■□□□□ 0.19
HPS3-202ENST00000460120 OLFML2AQ68BL7 652 aa16.26■□□□□ 0.19
HPS3-202ENST00000460120 ELMOD2Q8IZ81 293 aa16.26■□□□□ 0.19
HPS3-202ENST00000460120 OR52N5Q8NH56 324 aa16.26■□□□□ 0.19
HPS3-202ENST00000460120 FAM46BQ96A09 425 aa16.26■□□□□ 0.19
HPS3-202ENST00000460120 B3GNT4Q9C0J1 378 aa16.26■□□□□ 0.19
HPS3-202ENST00000460120 CKLFQ9UBR5 152 aa16.26■□□□□ 0.19
HPS3-202ENST00000460120 MRPS18BQ9Y676 258 aaKnown RBP16.26■□□□□ 0.19
HPS3-202ENST00000460120 H7C417 338 aa16.25■□□□□ 0.19
HPS3-202ENST00000460120 RGS11O94810 467 aa16.25■□□□□ 0.19
HPS3-202ENST00000460120 CSRP1P21291 193 aaKnown RBP16.25■□□□□ 0.19
HPS3-202ENST00000460120 ZNF574Q6ZN55 896 aaPredicted RBP16.25■□□□□ 0.19
HPS3-202ENST00000460120 TMED4Q7Z7H5 227 aa16.25■□□□□ 0.19
HPS3-202ENST00000460120 GPAT4Q86UL3 456 aa16.25■□□□□ 0.19
HPS3-202ENST00000460120 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.25■□□□□ 0.19
HPS3-202ENST00000460120 APCDD1LQ8NCL9 501 aa16.25■□□□□ 0.19
HPS3-202ENST00000460120 ASB17Q8WXJ9 295 aa16.25■□□□□ 0.19
HPS3-202ENST00000460120 HGDQ93099 445 aa16.25■□□□□ 0.19
HPS3-202ENST00000460120 MSANTD3Q96H12 275 aa16.25■□□□□ 0.19
HPS3-202ENST00000460120 VSX1Q9NZR4 365 aaPredicted RBP16.25■□□□□ 0.19
HPS3-202ENST00000460120 MTFP1Q9UDX5 166 aa16.25■□□□□ 0.19
HPS3-202ENST00000460120 FARSAQ9Y285 508 aaKnown RBP16.25■□□□□ 0.19
HPS3-202ENST00000460120 COL6A3P12111 3177 aa16.25■□□□□ 0.19
HPS3-202ENST00000460120 FREM2Q5SZK8 3169 aa16.25■□□□□ 0.19
HPS3-202ENST00000460120 TMEM269A0A1B0GVZ9 245 aa16.25■□□□□ 0.19
HPS3-202ENST00000460120 LOC107986453A0A1B0GWG9 222 aa16.25■□□□□ 0.19
HPS3-202ENST00000460120 M0R233 179 aa16.25■□□□□ 0.19
HPS3-202ENST00000460120 SCO1O75880 301 aa16.25■□□□□ 0.19
HPS3-202ENST00000460120 GIMD1P0DJR0 217 aa16.25■□□□□ 0.19
HPS3-202ENST00000460120 PRSS3P35030 304 aa16.25■□□□□ 0.19
HPS3-202ENST00000460120 MNDAP41218 407 aa16.25■□□□□ 0.19
HPS3-202ENST00000460120 FAM198BQ6UWH4 519 aa16.25■□□□□ 0.19
HPS3-202ENST00000460120 NUP54Q7Z3B4 507 aa16.25■□□□□ 0.19
HPS3-202ENST00000460120 ACBD4Q8NC06 268 aa16.25■□□□□ 0.19
HPS3-202ENST00000460120 MNTQ99583 582 aa16.25■□□□□ 0.19
HPS3-202ENST00000460120 COQ3Q9NZJ6 369 aa16.25■□□□□ 0.19
HPS3-202ENST00000460120 PIPOXQ9P0Z9 390 aa16.25■□□□□ 0.19
HPS3-202ENST00000460120 LOC100289279A0A1B0GTE1 492 aa16.25■□□□□ 0.19
HPS3-202ENST00000460120 TEX46H3BTG2 121 aa16.25■□□□□ 0.19
HPS3-202ENST00000460120 GOSR2O14653 212 aa16.25■□□□□ 0.19
HPS3-202ENST00000460120 PRAF2O60831 178 aa16.25■□□□□ 0.19
HPS3-202ENST00000460120 GNALP38405 381 aa16.25■□□□□ 0.19
HPS3-202ENST00000460120 CSRP2Q16527 193 aa16.25■□□□□ 0.19
HPS3-202ENST00000460120 MOGAT2Q3SYC2 334 aa16.25■□□□□ 0.19
HPS3-202ENST00000460120 C4orf46Q504U0 113 aa16.25■□□□□ 0.19
HPS3-202ENST00000460120 GUSBP11Q6P575 273 aa16.25■□□□□ 0.19
HPS3-202ENST00000460120 PAPD4Q6PIY7 484 aaKnown RBP16.25■□□□□ 0.19
HPS3-202ENST00000460120 ANKRD37Q7Z713 158 aa16.25■□□□□ 0.19
HPS3-202ENST00000460120 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.25■□□□□ 0.19
HPS3-202ENST00000460120 SORCS2Q96PQ0 1159 aa16.25■□□□□ 0.19
HPS3-202ENST00000460120 EXO5Q9H790 373 aa16.25■□□□□ 0.19
HPS3-202ENST00000460120 AKIRIN1Q9H9L7 192 aaPredicted RBP16.25■□□□□ 0.19
HPS3-202ENST00000460120 NPDC1Q9NQX5 325 aaPredicted RBP16.25■□□□□ 0.19
HPS3-202ENST00000460120 MUC3AQ02505 3323 aa16.24■□□□□ 0.19
HPS3-202ENST00000460120 TRIOBPQ9H2D6 2365 aa16.24■□□□□ 0.19
HPS3-202ENST00000460120 SLC17A2O00624 439 aa16.24■□□□□ 0.19
HPS3-202ENST00000460120 CD2P06729 351 aa16.24■□□□□ 0.19
HPS3-202ENST00000460120 HTR2CP28335 458 aa16.24■□□□□ 0.19
HPS3-202ENST00000460120 BIDP55957 195 aa16.24■□□□□ 0.19
HPS3-202ENST00000460120 MRPS10P82664 201 aaKnown RBP16.24■□□□□ 0.19
HPS3-202ENST00000460120 C11orf88Q6PI97 169 aa16.24■□□□□ 0.19
HPS3-202ENST00000460120 CATSPERDQ86XM0 798 aa16.24■□□□□ 0.19
HPS3-202ENST00000460120 RBP7Q96R05 134 aa16.24■□□□□ 0.19
HPS3-202ENST00000460120 MRI1Q9BV20 369 aa16.24■□□□□ 0.19
HPS3-202ENST00000460120 CHRNA10Q9GZZ6 450 aa16.24■□□□□ 0.19
HPS3-202ENST00000460120 GPN1Q9HCN4 374 aaPredicted RBP16.24■□□□□ 0.19
HPS3-202ENST00000460120 CNTRLQ7Z7A1 2325 aa16.24■□□□□ 0.19
HPS3-202ENST00000460120 ARPC5O15511 151 aa16.24■□□□□ 0.19
HPS3-202ENST00000460120 CXCL2P19875 107 aa16.24■□□□□ 0.19
HPS3-202ENST00000460120 NKAIN1Q4KMZ8 207 aa16.24■□□□□ 0.19
HPS3-202ENST00000460120 TEX30Q5JUR7 227 aa16.24■□□□□ 0.19
HPS3-202ENST00000460120 SFRP5Q5T4F7 317 aa16.24■□□□□ 0.19
HPS3-202ENST00000460120 CMBLQ96DG6 245 aa16.24■□□□□ 0.19
HPS3-202ENST00000460120 SEC61A2Q9H9S3 476 aa16.24■□□□□ 0.19
HPS3-202ENST00000460120 APMAPQ9HDC9 416 aa16.24■□□□□ 0.19
HPS3-202ENST00000460120 OR52A1Q9UKL2 312 aa16.24■□□□□ 0.19
HPS3-202ENST00000460120 KIF26BQ2KJY2 2108 aa16.23■□□□□ 0.19
HPS3-202ENST00000460120 NUP210LQ5VU65 1888 aa16.23■□□□□ 0.19
HPS3-202ENST00000460120 FXYD6-FXYD2A0A087WZ82 144 aa16.23■□□□□ 0.19
HPS3-202ENST00000460120 A0A1W2PNR3 127 aa16.23■□□□□ 0.19
HPS3-202ENST00000460120 A0A1W2PPL8 197 aa16.23■□□□□ 0.19
HPS3-202ENST00000460120 CCDC85CA6NKD9 419 aa16.23■□□□□ 0.19
HPS3-202ENST00000460120 FTCDNL1E5RQL4 147 aa16.23■□□□□ 0.19
HPS3-202ENST00000460120 ADAM10O14672 748 aa16.23■□□□□ 0.19
HPS3-202ENST00000460120 ZNF35P13682 527 aa16.23■□□□□ 0.19
HPS3-202ENST00000460120 SCGB2B2Q4G0G5 96 aa16.23■□□□□ 0.19
HPS3-202ENST00000460120 ZNF626Q68DY1 528 aa16.23■□□□□ 0.19
HPS3-202ENST00000460120 LCN10Q6JVE6 187 aa16.23■□□□□ 0.19
HPS3-202ENST00000460120 C17orf107Q6ZR85 190 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms