RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 DCUN1D5Q9BTE7 237 aa7.95□□□□□ -1.14
VPS50-207ENST00000458530 MRPL13Q9BYD1 178 aaKnown RBP7.95□□□□□ -1.14
VPS50-207ENST00000458530 DCSTAMPQ9H295 470 aa7.95□□□□□ -1.14
VPS50-207ENST00000458530 SLC6A15Q9H2J7 730 aa7.95□□□□□ -1.14
VPS50-207ENST00000458530 CCDC59Q9P031 241 aaKnown RBP7.95□□□□□ -1.14
VPS50-207ENST00000458530 GNG8Q9UK08 70 aa7.95□□□□□ -1.14
VPS50-207ENST00000458530 POLR1DQ9Y2S0 133 aa7.95□□□□□ -1.14
VPS50-207ENST00000458530 HIVEP1P15822 2718 aa7.95□□□□□ -1.14
VPS50-207ENST00000458530 MED12Q93074 2177 aa7.95□□□□□ -1.14
VPS50-207ENST00000458530 POLEQ07864 2286 aa7.95□□□□□ -1.14
VPS50-207ENST00000458530 TRDV1A0A1B0GX56 115 aa7.94□□□□□ -1.14
VPS50-207ENST00000458530 FAM181BA6NEQ2 426 aa7.94□□□□□ -1.14
VPS50-207ENST00000458530 TVP23AA6NH52 213 aa7.94□□□□□ -1.14
VPS50-207ENST00000458530 METTL15A6NJ78 407 aa7.94□□□□□ -1.14
VPS50-207ENST00000458530 FAM171A2A8MVW0 826 aa7.94□□□□□ -1.14
VPS50-207ENST00000458530 DCTN6O00399 190 aa7.94□□□□□ -1.14
VPS50-207ENST00000458530 SMAD9O15198 467 aaKnown RBP7.94□□□□□ -1.14
VPS50-207ENST00000458530 CYTIPO60759 359 aa7.94□□□□□ -1.14
VPS50-207ENST00000458530 RGS9O75916 674 aaPredicted RBP7.94□□□□□ -1.14
VPS50-207ENST00000458530 SPARCP09486 303 aa7.94□□□□□ -1.14
VPS50-207ENST00000458530 CELP19835 753 aa7.94□□□□□ -1.14
VPS50-207ENST00000458530 LAP3P28838 519 aa7.94□□□□□ -1.14
VPS50-207ENST00000458530 FGF9P31371 208 aaPredicted RBP7.94□□□□□ -1.14
VPS50-207ENST00000458530 RFC3P40938 356 aa7.94□□□□□ -1.14
VPS50-207ENST00000458530 CLDN15P56746 228 aa7.94□□□□□ -1.14
VPS50-207ENST00000458530 VBP1P61758 197 aa7.94□□□□□ -1.14
VPS50-207ENST00000458530 LSM3P62310 102 aaKnown RBP7.94□□□□□ -1.14
VPS50-207ENST00000458530 LSAMPQ13449 338 aa7.94□□□□□ -1.14
VPS50-207ENST00000458530 CAMK2DQ13557 499 aa7.94□□□□□ -1.14
VPS50-207ENST00000458530 ZNF169Q14929 603 aaPredicted RBP7.94□□□□□ -1.14
VPS50-207ENST00000458530 RNPS1Q15287 305 aaKnown RBP7.94□□□□□ -1.14
VPS50-207ENST00000458530 VASNQ6EMK4 673 aa7.94□□□□□ -1.14
VPS50-207ENST00000458530 RPL22L1Q6P5R6 122 aaKnown RBP7.94□□□□□ -1.14
VPS50-207ENST00000458530 CREB3L2Q70SY1 520 aa7.94□□□□□ -1.14
VPS50-207ENST00000458530 MCEMP1Q8IX19 187 aa7.94□□□□□ -1.14
VPS50-207ENST00000458530 YIPF7Q8N8F6 280 aa7.94□□□□□ -1.14
VPS50-207ENST00000458530 SLC26A10Q8NG04 563 aa7.94□□□□□ -1.14
VPS50-207ENST00000458530 TMEM45BQ96B21 275 aa7.94□□□□□ -1.14
VPS50-207ENST00000458530 TXNDC15Q96J42 360 aa7.94□□□□□ -1.14
VPS50-207ENST00000458530 KCTD7Q96MP8 289 aa7.94□□□□□ -1.14
VPS50-207ENST00000458530 CDADC1Q9BWV3 514 aa7.94□□□□□ -1.14
VPS50-207ENST00000458530 MROQ9BYG7 248 aa7.94□□□□□ -1.14
VPS50-207ENST00000458530 SRXN1Q9BYN0 137 aa7.94□□□□□ -1.14
VPS50-207ENST00000458530 PRRG4Q9BZD6 226 aa7.94□□□□□ -1.14
VPS50-207ENST00000458530 OR51E2Q9H255 320 aa7.94□□□□□ -1.14
VPS50-207ENST00000458530 ZDHHC11Q9H8X9 412 aa7.94□□□□□ -1.14
VPS50-207ENST00000458530 PARPBPQ9NWS1 579 aa7.94□□□□□ -1.14
VPS50-207ENST00000458530 GLTPQ9NZD2 209 aa7.94□□□□□ -1.14
VPS50-207ENST00000458530 IKZF2Q9UKS7 526 aa7.94□□□□□ -1.14
VPS50-207ENST00000458530 COA3Q9Y2R0 106 aaPredicted RBP7.94□□□□□ -1.14
VPS50-207ENST00000458530 A3GALT2U3KPV4 340 aa7.94□□□□□ -1.14
VPS50-207ENST00000458530 PDZD2O15018 2839 aa7.94□□□□□ -1.14
VPS50-207ENST00000458530 ZNF407Q9C0G0 2248 aa7.94□□□□□ -1.14
VPS50-207ENST00000458530 ARHGAP21Q5T5U3 1957 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 ADGRG4Q8IZF6 3080 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 IGKV3D-15A0A087WSY6 115 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 IGHV3-15A0A0B4J1V0 119 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 A0A1W2PPL8 197 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 ZNF814B7Z6K7 855 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 ZNF593O00488 134 aaPredicted RBP7.93□□□□□ -1.14
VPS50-207ENST00000458530 OGG1O15527 345 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 PLPP2O43688 288 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 ZNF254O75437 659 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 CLPXO76031 633 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 ZNF432O94892 652 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 IGHG3P01860 377 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 PDGFAP04085 211 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 GAAP10253 952 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 ZNF182P17025 639 aaPredicted RBP7.93□□□□□ -1.14
VPS50-207ENST00000458530 ALOX5APP20292 161 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 NR4A1P22736 598 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 MYL9P24844 172 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 EDNRAP25101 427 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 PTGS2P35354 604 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 STARP49675 285 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 ZNF133P52736 654 aaPredicted RBP7.93□□□□□ -1.14
VPS50-207ENST00000458530 RIDAP52758 137 aaKnown RBP7.93□□□□□ -1.14
VPS50-207ENST00000458530 SUCLG1P53597 346 aaKnown RBP7.93□□□□□ -1.14
VPS50-207ENST00000458530 CLDN18P56856 261 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 OR12D2P58182 307 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 NCS1P62166 190 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 SIRPAP78324 504 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 RUNX1T1Q06455 604 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 RASGEF1BQ0VAM2 473 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 AQP6Q13520 282 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 EIF2B1Q14232 305 aaKnown RBP7.93□□□□□ -1.14
VPS50-207ENST00000458530 SPCS2Q15005 226 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 CDK5R1Q15078 307 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 SF3B4Q15427 424 aaKnown RBP eCLIP7.93□□□□□ -1.14
VPS50-207ENST00000458530 HIST3H3Q16695 136 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 KRTAP21-3Q3LHN1 58 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 TP53I3Q53FA7 332 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 C10orf128Q5T292 105 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 SLC25A47Q6Q0C1 308 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 CD200R1LQ6Q8B3 271 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 DEGS2Q6QHC5 323 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 ARL9Q6T311 187 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 NHLRC1Q6VVB1 395 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 TRILQ7L0X0 811 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 AAED1Q7RTV5 226 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms