RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 DDX28Q9NUL7 540 aaKnown RBP18.24■□□□□ 0.51
CPNE1-220ENST00000458038 OPN4Q9UHM6 478 aa18.24■□□□□ 0.51
CPNE1-220ENST00000458038 ISPDA4D126 451 aa18.23■□□□□ 0.51
CPNE1-220ENST00000458038 PRSS23O95084 383 aa18.23■□□□□ 0.51
CPNE1-220ENST00000458038 IGHMP01871 453 aa18.23■□□□□ 0.51
CPNE1-220ENST00000458038 ST3GAL3Q11203 375 aa18.23■□□□□ 0.51
CPNE1-220ENST00000458038 ANKDD1AQ495B1 522 aa18.23■□□□□ 0.51
CPNE1-220ENST00000458038 RBMS3Q6XE24 437 aaKnown RBP18.23■□□□□ 0.51
CPNE1-220ENST00000458038 WNT5BQ9H1J7 359 aa18.23■□□□□ 0.51
CPNE1-220ENST00000458038 NPTNQ9Y639 398 aa18.23■□□□□ 0.51
CPNE1-220ENST00000458038 MEGF8Q7Z7M0 2845 aa18.22■□□□□ 0.51
CPNE1-220ENST00000458038 IGKV1D-43A0A0B4J1Z2 117 aa18.22■□□□□ 0.51
CPNE1-220ENST00000458038 A6NIZ1 184 aa18.22■□□□□ 0.51
CPNE1-220ENST00000458038 ZSCAN5BA6NJL1 495 aa18.22■□□□□ 0.51
CPNE1-220ENST00000458038 TNFSF4P23510 183 aa18.22■□□□□ 0.51
CPNE1-220ENST00000458038 LAP3P28838 519 aa18.22■□□□□ 0.51
CPNE1-220ENST00000458038 RAP1BP61224 184 aa18.22■□□□□ 0.51
CPNE1-220ENST00000458038 RAP1AP62834 184 aa18.22■□□□□ 0.51
CPNE1-220ENST00000458038 LCN2P80188 198 aa18.22■□□□□ 0.51
CPNE1-220ENST00000458038 FMODQ06828 376 aa18.22■□□□□ 0.51
CPNE1-220ENST00000458038 AWAT1Q58HT5 328 aa18.22■□□□□ 0.51
CPNE1-220ENST00000458038 COQ5Q5HYK3 327 aa18.22■□□□□ 0.51
CPNE1-220ENST00000458038 FOXL2NBQ6ZUU3 175 aa18.22■□□□□ 0.51
CPNE1-220ENST00000458038 ZDHHC22Q8N966 263 aa18.22■□□□□ 0.51
CPNE1-220ENST00000458038 DVL3Q92997 716 aaPredicted RBP18.22■□□□□ 0.51
CPNE1-220ENST00000458038 POP5Q969H6 163 aaKnown RBP18.22■□□□□ 0.51
CPNE1-220ENST00000458038 LRRC58Q96CX6 371 aa18.22■□□□□ 0.51
CPNE1-220ENST00000458038 BPIFA2Q96DR5 249 aa18.22■□□□□ 0.51
CPNE1-220ENST00000458038 C4orf45Q96LM5 186 aa18.22■□□□□ 0.51
CPNE1-220ENST00000458038 GPA33Q99795 319 aa18.22■□□□□ 0.51
CPNE1-220ENST00000458038 UBAP1Q9NZ09 502 aa18.22■□□□□ 0.51
CPNE1-220ENST00000458038 NDRG4Q9ULP0 352 aaKnown RBP18.22■□□□□ 0.51
CPNE1-220ENST00000458038 POLR3KQ9Y2Y1 108 aaPredicted RBP18.22■□□□□ 0.51
CPNE1-220ENST00000458038 C12orf71A8MTZ7 269 aa18.21■□□□□ 0.51
CPNE1-220ENST00000458038 FBP2O00757 339 aa18.21■□□□□ 0.51
CPNE1-220ENST00000458038 COX5BP10606 129 aa18.21■□□□□ 0.51
CPNE1-220ENST00000458038 GSTM3P21266 225 aa18.21■□□□□ 0.51
CPNE1-220ENST00000458038 UBA52P62987 128 aaKnown RBP18.21■□□□□ 0.51
CPNE1-220ENST00000458038 TNFAIP6P98066 277 aaPredicted RBP18.21■□□□□ 0.51
CPNE1-220ENST00000458038 FOXL1Q12952 345 aa18.21■□□□□ 0.51
CPNE1-220ENST00000458038 CDK5R2Q13319 367 aa18.21■□□□□ 0.51
CPNE1-220ENST00000458038 MTX3Q5HYI7 312 aa18.21■□□□□ 0.51
CPNE1-220ENST00000458038 RFPL4BQ6ZWI9 263 aa18.21■□□□□ 0.51
CPNE1-220ENST00000458038 KLHL36Q8N4N3 616 aa18.21■□□□□ 0.51
CPNE1-220ENST00000458038 SPICQ8N5J4 248 aa18.21■□□□□ 0.51
CPNE1-220ENST00000458038 NPEPL1Q8NDH3 523 aa18.21■□□□□ 0.51
CPNE1-220ENST00000458038 THOC1Q96FV9 657 aaKnown RBP18.21■□□□□ 0.51
CPNE1-220ENST00000458038 ZMAT3Q9HA38 289 aaKnown RBP18.21■□□□□ 0.51
CPNE1-220ENST00000458038 ESM1Q9NQ30 184 aa18.21■□□□□ 0.51
CPNE1-220ENST00000458038 MAN2C1Q9NTJ4 1040 aa18.21■□□□□ 0.51
CPNE1-220ENST00000458038 DOCK11Q5JSL3 2073 aa18.2■□□□□ 0.5
CPNE1-220ENST00000458038 TIMM8AO60220 97 aaPredicted RBP18.2■□□□□ 0.5
CPNE1-220ENST00000458038 NGFP01138 241 aa18.2■□□□□ 0.5
CPNE1-220ENST00000458038 IGHV2-70P01814 119 aa18.2■□□□□ 0.5
CPNE1-220ENST00000458038 TNFRSF1AP19438 455 aa18.2■□□□□ 0.5
CPNE1-220ENST00000458038 TNFRSF1BP20333 461 aa18.2■□□□□ 0.5
CPNE1-220ENST00000458038 MSR1P21757 451 aa18.2■□□□□ 0.5
CPNE1-220ENST00000458038 CTXN1P60606 82 aa18.2■□□□□ 0.5
CPNE1-220ENST00000458038 TTMPQ5BVD1 217 aa18.2■□□□□ 0.5
CPNE1-220ENST00000458038 RABL3Q5HYI8 236 aa18.2■□□□□ 0.5
CPNE1-220ENST00000458038 TMEM255AQ5JRV8 349 aa18.2■□□□□ 0.5
CPNE1-220ENST00000458038 SAMD8Q96LT4 415 aa18.2■□□□□ 0.5
CPNE1-220ENST00000458038 NPHS2Q9NP85 383 aa18.2■□□□□ 0.5
CPNE1-220ENST00000458038 TBCCD1Q9NVR7 557 aa18.2■□□□□ 0.5
CPNE1-220ENST00000458038 A0A0G2JND7 137 aa18.19■□□□□ 0.5
CPNE1-220ENST00000458038 HMGB1P1B2RPK0 211 aaPredicted RBP18.19■□□□□ 0.5
CPNE1-220ENST00000458038 EDF1O60869 148 aaKnown RBP18.19■□□□□ 0.5
CPNE1-220ENST00000458038 SHOX2O60902 331 aaPredicted RBP18.19■□□□□ 0.5
CPNE1-220ENST00000458038 CPT2P23786 658 aa18.19■□□□□ 0.5
CPNE1-220ENST00000458038 OR1E2P47887 323 aa18.19■□□□□ 0.5
CPNE1-220ENST00000458038 PSG7Q13046 419 aa18.19■□□□□ 0.5
CPNE1-220ENST00000458038 TOP3AQ13472 1001 aaPredicted RBP18.19■□□□□ 0.5
CPNE1-220ENST00000458038 TUSC1Q2TAM9 212 aa18.19■□□□□ 0.5
CPNE1-220ENST00000458038 TMEM155Q4W5P6 130 aa18.19■□□□□ 0.5
CPNE1-220ENST00000458038 C10orf82Q8WW14 230 aa18.19■□□□□ 0.5
CPNE1-220ENST00000458038 GEMIN6Q8WXD5 167 aaKnown RBP18.19■□□□□ 0.5
CPNE1-220ENST00000458038 PRRC1Q96M27 445 aa18.19■□□□□ 0.5
CPNE1-220ENST00000458038 COG8Q96MW5 612 aa18.19■□□□□ 0.5
CPNE1-220ENST00000458038 ZNF583Q96ND8 569 aa18.19■□□□□ 0.5
CPNE1-220ENST00000458038 ZNF747Q9BV97 191 aa18.19■□□□□ 0.5
CPNE1-220ENST00000458038 MSL2Q9HCI7 577 aa18.19■□□□□ 0.5
CPNE1-220ENST00000458038 TMEM106BQ9NUM4 274 aa18.19■□□□□ 0.5
CPNE1-220ENST00000458038 PURGQ9UJV8 347 aaKnown RBP18.19■□□□□ 0.5
CPNE1-220ENST00000458038 BBIP1A8MTZ0 92 aa18.18■□□□□ 0.5
CPNE1-220ENST00000458038 SURF4O15260 269 aa18.18■□□□□ 0.5
CPNE1-220ENST00000458038 WIPF1O43516 503 aa18.18■□□□□ 0.5
CPNE1-220ENST00000458038 AHCYL1O43865 530 aa18.18■□□□□ 0.5
CPNE1-220ENST00000458038 ABHD16AO95870 558 aa18.18■□□□□ 0.5
CPNE1-220ENST00000458038 SBK2P0C263 348 aa18.18■□□□□ 0.5
CPNE1-220ENST00000458038 HKR1P10072 659 aa18.18■□□□□ 0.5
CPNE1-220ENST00000458038 IFI30P13284 250 aa18.18■□□□□ 0.5
CPNE1-220ENST00000458038 KDELR2P33947 212 aa18.18■□□□□ 0.5
CPNE1-220ENST00000458038 CYBRD1Q53TN4 286 aa18.18■□□□□ 0.5
CPNE1-220ENST00000458038 ZNF774Q6NX45 483 aa18.18■□□□□ 0.5
CPNE1-220ENST00000458038 SHISA2Q6UWI4 295 aa18.18■□□□□ 0.5
CPNE1-220ENST00000458038 DOK3Q7L591 496 aa18.18■□□□□ 0.5
CPNE1-220ENST00000458038 LRRC28Q86X40 367 aaPredicted RBP18.18■□□□□ 0.5
CPNE1-220ENST00000458038 ZNF283Q8N7M2 679 aa18.18■□□□□ 0.5
CPNE1-220ENST00000458038 LZICQ8WZA0 190 aa18.18■□□□□ 0.5
CPNE1-220ENST00000458038 PATZ1Q9HBE1 687 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms