RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 SLC17A2O00624 439 aa14.91□□□□□ -0.02
CCDC43-202ENST00000457422 NTN3O00634 580 aaPredicted RBP14.91□□□□□ -0.02
CCDC43-202ENST00000457422 ISG15P05161 165 aa14.91□□□□□ -0.02
CCDC43-202ENST00000457422 CD2P06729 351 aa14.91□□□□□ -0.02
CCDC43-202ENST00000457422 TMIGD3P0DMS9 266 aaPredicted RBP14.91□□□□□ -0.02
CCDC43-202ENST00000457422 CD37P11049 281 aa14.91□□□□□ -0.02
CCDC43-202ENST00000457422 MYBPHQ13203 477 aa14.91□□□□□ -0.02
CCDC43-202ENST00000457422 TRA2AQ13595 282 aaKnown RBP eCLIP14.91□□□□□ -0.02
CCDC43-202ENST00000457422 PCOLCEQ15113 449 aa14.91□□□□□ -0.02
CCDC43-202ENST00000457422 INPP5JQ15735 1006 aaPredicted RBP14.91□□□□□ -0.02
CCDC43-202ENST00000457422 C3orf33Q6P1S2 294 aa14.91□□□□□ -0.02
CCDC43-202ENST00000457422 ANKRD16Q6P6B7 361 aa14.91□□□□□ -0.02
CCDC43-202ENST00000457422 FGD2Q7Z6J4 655 aa14.91□□□□□ -0.02
CCDC43-202ENST00000457422 OR2M3Q8NG83 312 aa14.91□□□□□ -0.02
CCDC43-202ENST00000457422 DEDD2Q8WXF8 326 aa14.91□□□□□ -0.02
CCDC43-202ENST00000457422 CMKLR1Q99788 373 aa14.91□□□□□ -0.02
CCDC43-202ENST00000457422 SLC17A5Q9NRA2 495 aa14.91□□□□□ -0.02
CCDC43-202ENST00000457422 KLK11Q9UBX7 282 aa14.91□□□□□ -0.02
CCDC43-202ENST00000457422 SMLR1H3BR10 107 aa14.91□□□□□ -0.02
CCDC43-202ENST00000457422 GMDSO60547 372 aa14.91□□□□□ -0.02
CCDC43-202ENST00000457422 ITGA5P08648 1049 aa14.91□□□□□ -0.02
CCDC43-202ENST00000457422 PTHLHP12272 177 aa14.91□□□□□ -0.02
CCDC43-202ENST00000457422 IGFBP3P17936 291 aaPredicted RBP14.91□□□□□ -0.02
CCDC43-202ENST00000457422 S100A1P23297 94 aa14.91□□□□□ -0.02
CCDC43-202ENST00000457422 C19orf57Q0VDD7 668 aa14.91□□□□□ -0.02
CCDC43-202ENST00000457422 TMEM225Q6GV28 225 aa14.91□□□□□ -0.02
CCDC43-202ENST00000457422 DCXRQ7Z4W1 244 aa14.91□□□□□ -0.02
CCDC43-202ENST00000457422 OR11G2Q8NGC1 345 aa14.91□□□□□ -0.02
CCDC43-202ENST00000457422 OR11H7Q8NGC8 314 aa14.91□□□□□ -0.02
CCDC43-202ENST00000457422 GIMAP1Q8WWP7 306 aa14.91□□□□□ -0.02
CCDC43-202ENST00000457422 HYLS1Q96M11 299 aa14.91□□□□□ -0.02
CCDC43-202ENST00000457422 G6PC2Q9NQR9 355 aa14.91□□□□□ -0.02
CCDC43-202ENST00000457422 STMN3Q9NZ72 180 aa14.91□□□□□ -0.02
CCDC43-202ENST00000457422 PEX14O75381 377 aa14.9□□□□□ -0.02
CCDC43-202ENST00000457422 SYPP08247 313 aa14.9□□□□□ -0.02
CCDC43-202ENST00000457422 PSMB1P20618 241 aaKnown RBP14.9□□□□□ -0.02
CCDC43-202ENST00000457422 ACHEP22303 614 aa14.9□□□□□ -0.02
CCDC43-202ENST00000457422 TOMM20Q15388 145 aa14.9□□□□□ -0.02
CCDC43-202ENST00000457422 RAB11BQ15907 218 aa14.9□□□□□ -0.02
CCDC43-202ENST00000457422 TMEM255AQ5JRV8 349 aa14.9□□□□□ -0.02
CCDC43-202ENST00000457422 LINC00346Q8IVM7 164 aa14.9□□□□□ -0.02
CCDC43-202ENST00000457422 FADS6Q8N9I5 356 aa14.9□□□□□ -0.02
CCDC43-202ENST00000457422 OR51D1Q8NGF3 324 aa14.9□□□□□ -0.02
CCDC43-202ENST00000457422 OR5M1Q8NGP8 315 aa14.9□□□□□ -0.02
CCDC43-202ENST00000457422 MRPL13Q9BYD1 178 aaKnown RBP14.9□□□□□ -0.02
CCDC43-202ENST00000457422 CKLFQ9UBR5 152 aa14.9□□□□□ -0.02
CCDC43-202ENST00000457422 FBXL2Q9UKC9 423 aa14.9□□□□□ -0.02
CCDC43-202ENST00000457422 FBXL3Q9UKT7 428 aa14.9□□□□□ -0.02
CCDC43-202ENST00000457422 LAMTOR5O43504 91 aa14.89□□□□□ -0.03
CCDC43-202ENST00000457422 PRAF2O60831 178 aa14.89□□□□□ -0.03
CCDC43-202ENST00000457422 CTAG2O75638 210 aa14.89□□□□□ -0.03
CCDC43-202ENST00000457422 CELA2AP08217 269 aa14.89□□□□□ -0.03
CCDC43-202ENST00000457422 POU3F4P49335 361 aa14.89□□□□□ -0.03
CCDC43-202ENST00000457422 P2RY4P51582 365 aa14.89□□□□□ -0.03
CCDC43-202ENST00000457422 BIDP55957 195 aa14.89□□□□□ -0.03
CCDC43-202ENST00000457422 GPR85P60893 370 aa14.89□□□□□ -0.03
CCDC43-202ENST00000457422 SNTA1Q13424 505 aa14.89□□□□□ -0.03
CCDC43-202ENST00000457422 BTBD16Q32M84 506 aa14.89□□□□□ -0.03
CCDC43-202ENST00000457422 RNF133Q8WVZ7 376 aa14.89□□□□□ -0.03
CCDC43-202ENST00000457422 TMEM185BQ9H7F4 350 aa14.89□□□□□ -0.03
CCDC43-202ENST00000457422 GPN3Q9UHW5 284 aaPredicted RBP14.89□□□□□ -0.03
CCDC43-202ENST00000457422 HHLA2Q9UM44 414 aa14.89□□□□□ -0.03
CCDC43-202ENST00000457422 EMC9Q9Y3B6 208 aa14.89□□□□□ -0.03
CCDC43-202ENST00000457422 CHCHD2Q9Y6H1 151 aaPredicted RBP14.89□□□□□ -0.03
CCDC43-202ENST00000457422 LOC100289279A0A1B0GTE1 492 aa14.89□□□□□ -0.03
CCDC43-202ENST00000457422 A0A1W2PQ72 361 aa14.89□□□□□ -0.03
CCDC43-202ENST00000457422 GGT3PA6NGU5 568 aa14.89□□□□□ -0.03
CCDC43-202ENST00000457422 OPN1LWP04000 364 aa14.89□□□□□ -0.03
CCDC43-202ENST00000457422 ANXA3P12429 323 aa14.89□□□□□ -0.03
CCDC43-202ENST00000457422 ADH6P28332 368 aa14.89□□□□□ -0.03
CCDC43-202ENST00000457422 DUSP3P51452 185 aaPredicted RBP14.89□□□□□ -0.03
CCDC43-202ENST00000457422 FOXK1P85037 733 aa14.89□□□□□ -0.03
CCDC43-202ENST00000457422 ZNF239Q16600 458 aaKnown RBP14.89□□□□□ -0.03
CCDC43-202ENST00000457422 ST3GAL2Q16842 350 aa14.89□□□□□ -0.03
CCDC43-202ENST00000457422 GLT8D1Q68CQ7 371 aa14.89□□□□□ -0.03
CCDC43-202ENST00000457422 LAMTOR1Q6IAA8 161 aa14.89□□□□□ -0.03
CCDC43-202ENST00000457422 TMEM81Q6P7N7 255 aa14.89□□□□□ -0.03
CCDC43-202ENST00000457422 ZNF704Q6ZNC4 412 aaPredicted RBP14.89□□□□□ -0.03
CCDC43-202ENST00000457422 GRPEL2Q8TAA5 225 aa14.89□□□□□ -0.03
CCDC43-202ENST00000457422 PHF21AQ96BD5 680 aa14.89□□□□□ -0.03
CCDC43-202ENST00000457422 FAM3DQ96BQ1 224 aa14.89□□□□□ -0.03
CCDC43-202ENST00000457422 EMC6Q9BV81 110 aa14.89□□□□□ -0.03
CCDC43-202ENST00000457422 OR52A1Q9UKL2 312 aa14.89□□□□□ -0.03
CCDC43-202ENST00000457422 CIB4A0PJX0 185 aa14.88□□□□□ -0.03
CCDC43-202ENST00000457422 TP53I11O14683 189 aa14.88□□□□□ -0.03
CCDC43-202ENST00000457422 FABP7O15540 132 aa14.88□□□□□ -0.03
CCDC43-202ENST00000457422 CER1O95813 267 aa14.88□□□□□ -0.03
CCDC43-202ENST00000457422 SULT1A3P0DMM9 295 aa14.88□□□□□ -0.03
CCDC43-202ENST00000457422 SULT1A4P0DMN0 295 aa14.88□□□□□ -0.03
CCDC43-202ENST00000457422 FKBP2P26885 142 aaKnown RBP14.88□□□□□ -0.03
CCDC43-202ENST00000457422 MMP16P51512 607 aa14.88□□□□□ -0.03
CCDC43-202ENST00000457422 ZFP36L1Q07352 338 aaKnown RBP14.88□□□□□ -0.03
CCDC43-202ENST00000457422 THEM4Q5T1C6 240 aa14.88□□□□□ -0.03
CCDC43-202ENST00000457422 SFRP4Q6FHJ7 346 aaPredicted RBP14.88□□□□□ -0.03
CCDC43-202ENST00000457422 FAM198BQ6UWH4 519 aa14.88□□□□□ -0.03
CCDC43-202ENST00000457422 MAML2Q8IZL2 1156 aaPredicted RBP14.88□□□□□ -0.03
CCDC43-202ENST00000457422 WDSUB1Q8N9V3 476 aa14.88□□□□□ -0.03
CCDC43-202ENST00000457422 AGBL5Q8NDL9 886 aa14.88□□□□□ -0.03
CCDC43-202ENST00000457422 OR1J4Q8NGS1 313 aa14.88□□□□□ -0.03
CCDC43-202ENST00000457422 SLC25A43Q8WUT9 341 aaPredicted RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms