RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 MRPL24Q96A35 216 aaKnown RBP14.94□□□□□ -0.02
USP39-208ENST00000455732 IFT27Q9BW83 186 aa14.94□□□□□ -0.02
USP39-208ENST00000455732 ZNF416Q9BWM5 594 aa14.94□□□□□ -0.02
USP39-208ENST00000455732 OR2H1Q9GZK4 316 aa14.94□□□□□ -0.02
USP39-208ENST00000455732 LRMDAQ9H2I8 198 aa14.94□□□□□ -0.02
USP39-208ENST00000455732 MMADHCQ9H3L0 296 aaPredicted RBP14.94□□□□□ -0.02
USP39-208ENST00000455732 YY1AP1Q9H869 796 aa14.94□□□□□ -0.02
USP39-208ENST00000455732 CDH20Q9HBT6 801 aa14.94□□□□□ -0.02
USP39-208ENST00000455732 TIMM10BQ9Y5J6 103 aa14.94□□□□□ -0.02
USP39-208ENST00000455732 U3KQV3 271 aa14.94□□□□□ -0.02
USP39-208ENST00000455732 TMEM129A0AVI4 362 aa14.93□□□□□ -0.02
USP39-208ENST00000455732 C12orf71A8MTZ7 269 aa14.93□□□□□ -0.02
USP39-208ENST00000455732 BHLHE40O14503 412 aa14.93□□□□□ -0.02
USP39-208ENST00000455732 SLC16A7O60669 478 aa14.93□□□□□ -0.02
USP39-208ENST00000455732 CST1P01037 141 aa14.93□□□□□ -0.02
USP39-208ENST00000455732 SCG5P05408 212 aa14.93□□□□□ -0.02
USP39-208ENST00000455732 HIST1H1CP16403 213 aaKnown RBP14.93□□□□□ -0.02
USP39-208ENST00000455732 GSTM3P21266 225 aa14.93□□□□□ -0.02
USP39-208ENST00000455732 APLNRP35414 380 aa14.93□□□□□ -0.02
USP39-208ENST00000455732 EFNA4P52798 201 aa14.93□□□□□ -0.02
USP39-208ENST00000455732 NUDT6P53370 316 aa14.93□□□□□ -0.02
USP39-208ENST00000455732 PPP1R8Q12972 351 aaKnown RBP14.93□□□□□ -0.02
USP39-208ENST00000455732 MSMPQ1L6U9 139 aa14.93□□□□□ -0.02
USP39-208ENST00000455732 DNM1P34Q6PK57 102 aa14.93□□□□□ -0.02
USP39-208ENST00000455732 JAZF1Q86VZ6 243 aa14.93□□□□□ -0.02
USP39-208ENST00000455732 MAPK1IP1LQ8NDC0 245 aa14.93□□□□□ -0.02
USP39-208ENST00000455732 PAPD5Q8NDF8 572 aaKnown RBP14.93□□□□□ -0.02
USP39-208ENST00000455732 OR10H5Q8NGA6 315 aa14.93□□□□□ -0.02
USP39-208ENST00000455732 DOK1Q99704 481 aa14.93□□□□□ -0.02
USP39-208ENST00000455732 NUAK2Q9H093 628 aa14.93□□□□□ -0.02
USP39-208ENST00000455732 RACGAP1Q9H0H5 632 aa14.93□□□□□ -0.02
USP39-208ENST00000455732 WNT5BQ9H1J7 359 aa14.93□□□□□ -0.02
USP39-208ENST00000455732 EGLN3Q9H6Z9 239 aa14.93□□□□□ -0.02
USP39-208ENST00000455732 JMJD1CQ15652 2540 aa14.92□□□□□ -0.02
USP39-208ENST00000455732 IGLV1-36A0A0B4J1U3 117 aa14.92□□□□□ -0.02
USP39-208ENST00000455732 ICMTO60725 284 aa14.92□□□□□ -0.02
USP39-208ENST00000455732 CCL2P13500 99 aa14.92□□□□□ -0.02
USP39-208ENST00000455732 STOMP27105 288 aa14.92□□□□□ -0.02
USP39-208ENST00000455732 APEX1P27695 318 aaKnown RBP14.92□□□□□ -0.02
USP39-208ENST00000455732 NOS3P29474 1203 aa14.92□□□□□ -0.02
USP39-208ENST00000455732 DSCR9P59020 149 aa14.92□□□□□ -0.02
USP39-208ENST00000455732 LSM6P62312 80 aaKnown RBP14.92□□□□□ -0.02
USP39-208ENST00000455732 KCNMB1Q16558 191 aa14.92□□□□□ -0.02
USP39-208ENST00000455732 LEG1Q6P5S2 330 aa14.92□□□□□ -0.02
USP39-208ENST00000455732 UGT2A3Q6UWM9 527 aa14.92□□□□□ -0.02
USP39-208ENST00000455732 CD300LDQ6UXZ3 194 aa14.92□□□□□ -0.02
USP39-208ENST00000455732 ALDH16A1Q8IZ83 802 aa14.92□□□□□ -0.02
USP39-208ENST00000455732 SVOPLQ8N434 492 aa14.92□□□□□ -0.02
USP39-208ENST00000455732 OR10G2Q8NGC3 310 aa14.92□□□□□ -0.02
USP39-208ENST00000455732 AKR7LQ8NHP1 331 aa14.92□□□□□ -0.02
USP39-208ENST00000455732 POM121L2Q96KW2 1035 aa14.92□□□□□ -0.02
USP39-208ENST00000455732 SORCS2Q96PQ0 1159 aa14.92□□□□□ -0.02
USP39-208ENST00000455732 NMNAT3Q96T66 252 aa14.92□□□□□ -0.02
USP39-208ENST00000455732 PLA2G12AQ9BZM1 189 aa14.92□□□□□ -0.02
USP39-208ENST00000455732 BCL2L14Q9BZR8 327 aa14.92□□□□□ -0.02
USP39-208ENST00000455732 EMC7Q9NPA0 242 aa14.92□□□□□ -0.02
USP39-208ENST00000455732 COA3Q9Y2R0 106 aaPredicted RBP14.92□□□□□ -0.02
USP39-208ENST00000455732 FKBP7Q9Y680 259 aa14.92□□□□□ -0.02
USP39-208ENST00000455732 IGHV4-30-2A0A087WSY4 118 aa14.91□□□□□ -0.02
USP39-208ENST00000455732 A0A096LNT2 108 aa14.91□□□□□ -0.02
USP39-208ENST00000455732 FKBP6O75344 327 aa14.91□□□□□ -0.02
USP39-208ENST00000455732 F12P00748 615 aaPredicted RBP14.91□□□□□ -0.02
USP39-208ENST00000455732 RENP00797 406 aa14.91□□□□□ -0.02
USP39-208ENST00000455732 GAAP10253 952 aa14.91□□□□□ -0.02
USP39-208ENST00000455732 COX5BP10606 129 aa14.91□□□□□ -0.02
USP39-208ENST00000455732 RAD52P43351 418 aa14.91□□□□□ -0.02
USP39-208ENST00000455732 SCRN3Q0VDG4 424 aa14.91□□□□□ -0.02
USP39-208ENST00000455732 COX10Q12887 443 aa14.91□□□□□ -0.02
USP39-208ENST00000455732 AQP6Q13520 282 aa14.91□□□□□ -0.02
USP39-208ENST00000455732 CLEC12AQ5QGZ9 265 aa14.91□□□□□ -0.02
USP39-208ENST00000455732 ZBTB46Q86UZ6 589 aa14.91□□□□□ -0.02
USP39-208ENST00000455732 OR8D4Q8NGM9 314 aa14.91□□□□□ -0.02
USP39-208ENST00000455732 OR4K13Q8NH42 304 aa14.91□□□□□ -0.02
USP39-208ENST00000455732 GIPC3Q8TF64 312 aa14.91□□□□□ -0.02
USP39-208ENST00000455732 MRPL37Q9BZE1 423 aaKnown RBP14.91□□□□□ -0.02
USP39-208ENST00000455732 BAIAP2Q9UQB8 552 aa14.91□□□□□ -0.02
USP39-208ENST00000455732 LOC100509620A0A075B734 347 aa14.9□□□□□ -0.02
USP39-208ENST00000455732 DCTN6O00399 190 aa14.9□□□□□ -0.02
USP39-208ENST00000455732 CSF3P09919 207 aa14.9□□□□□ -0.02
USP39-208ENST00000455732 GDI2P50395 445 aaKnown RBP14.9□□□□□ -0.02
USP39-208ENST00000455732 UCP2P55851 309 aa14.9□□□□□ -0.02
USP39-208ENST00000455732 CBX1P83916 185 aa14.9□□□□□ -0.02
USP39-208ENST00000455732 RGS7BPQ6MZT1 257 aaPredicted RBP14.9□□□□□ -0.02
USP39-208ENST00000455732 CLEC2AQ6UVW9 174 aa14.9□□□□□ -0.02
USP39-208ENST00000455732 C1orf174Q8IYL3 243 aa14.9□□□□□ -0.02
USP39-208ENST00000455732 OR6V1Q8N148 313 aa14.9□□□□□ -0.02
USP39-208ENST00000455732 LNX2Q8N448 690 aa14.9□□□□□ -0.02
USP39-208ENST00000455732 ZNF525Q8N782 197 aa14.9□□□□□ -0.02
USP39-208ENST00000455732 NPEPL1Q8NDH3 523 aa14.9□□□□□ -0.02
USP39-208ENST00000455732 SDR9C7Q8NEX9 313 aa14.9□□□□□ -0.02
USP39-208ENST00000455732 C11orf40Q8WZ69 217 aa14.9□□□□□ -0.02
USP39-208ENST00000455732 SLCO4A1Q96BD0 722 aa14.9□□□□□ -0.02
USP39-208ENST00000455732 FOXN4Q96NZ1 517 aa14.9□□□□□ -0.02
USP39-208ENST00000455732 TSSK2Q96PF2 358 aa14.9□□□□□ -0.02
USP39-208ENST00000455732 RHNO1Q9BSD3 238 aa14.9□□□□□ -0.02
USP39-208ENST00000455732 RERGLQ9H628 205 aa14.9□□□□□ -0.02
USP39-208ENST00000455732 TBC1D23Q9NUY8 699 aa14.9□□□□□ -0.02
USP39-208ENST00000455732 DNAJB9Q9UBS3 223 aa14.9□□□□□ -0.02
USP39-208ENST00000455732 NDRG4Q9ULP0 352 aaKnown RBP14.9□□□□□ -0.02
USP39-208ENST00000455732 B9D1Q9UPM9 204 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms