RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 LINC00696Q6ZRV3 163 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 PHYHIPQ92561 330 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 ZBTB8AQ96BR9 441 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 UCN2Q96RP3 112 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 RNF121Q9H920 327 aa12.2□□□□□ -0.46
CLK3-203ENST00000454830 A0A0G2JMM0 328 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 A0A1W2PPB8 328 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 A0A1W2PRS3 328 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 KIR3DP1A8MWS1 328 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 AIPO00170 330 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 P2RY10O00398 339 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 CDX4O14627 284 aaPredicted RBP12.19□□□□□ -0.46
CLK3-203ENST00000454830 TNFSF15O95150 251 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 ADRB1P08588 477 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 PTHLHP12272 177 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 LIFP15018 202 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 SSPNQ14714 243 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 ZNF227Q86WZ6 799 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 BEST3Q8N1M1 668 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 ZNF454Q8N9F8 522 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 HAVCR2Q8TDQ0 301 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 RNF128Q8TEB7 428 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 S100A16Q96FQ6 103 aaKnown RBP12.19□□□□□ -0.46
CLK3-203ENST00000454830 SLC25A44Q96H78 314 aaPredicted RBP12.19□□□□□ -0.46
CLK3-203ENST00000454830 HDGFL3Q9Y3E1 203 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 C9orf172C9J069 976 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 CD63P08962 238 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 GDF1P27539 372 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 CYB561P49447 251 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 STARP49675 285 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 DSCR4P56555 118 aaPredicted RBP12.19□□□□□ -0.46
CLK3-203ENST00000454830 PITPNAQ00169 270 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 MFAP5Q13361 173 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 TMEM69Q5SWH9 247 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 FAM205BPQ63HN1 556 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 OXGR1Q96P68 337 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 RBM24Q9BX46 236 aaKnown RBP12.19□□□□□ -0.46
CLK3-203ENST00000454830 RBFOX1Q9NWB1 397 aaKnown RBP12.19□□□□□ -0.46
CLK3-203ENST00000454830 B3GAT1Q9P2W7 334 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 ASH2LQ9UBL3 628 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 NUFIP1Q9UHK0 495 aaKnown RBP12.19□□□□□ -0.46
CLK3-203ENST00000454830 DNAJC13O75165 2243 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 A6NL46 340 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 SPOCK1Q08629 439 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 ZNF528Q3MIS6 628 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 BCL2L15Q5TBC7 163 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 UNQ9370/PRO34162Q6UXP9 181 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 SLAMF6Q96DU3 332 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 ANGPTL4Q9BY76 406 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 OR52A1Q9UKL2 312 aa12.19□□□□□ -0.46
CLK3-203ENST00000454830 RBMX2Q9Y388 322 aaKnown RBP12.19□□□□□ -0.46
CLK3-203ENST00000454830 GPR171O14626 319 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 IGHMP01871 453 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 ABHD17BQ5VST6 288 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 OR51D1Q8NGF3 324 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 OR6S1Q8NH40 331 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 PAQR8Q8TEZ7 354 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 ADAMTS14Q8WXS8 1223 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 SGCZQ96LD1 299 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 ZPBPQ9BS86 351 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 AUNIPQ9H7T9 357 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 MCUBQ9NWR8 336 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 CBR3O75828 277 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 LAP3P28838 519 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 MRPS15P82914 257 aaKnown RBP12.18□□□□□ -0.46
CLK3-203ENST00000454830 CD83Q01151 205 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 TBRG1Q3YBR2 411 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 UBE2NLQ5JXB2 153 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 SPINK14Q6IE38 97 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 GTPBP8Q8N3Z3 284 aaPredicted RBP12.18□□□□□ -0.46
CLK3-203ENST00000454830 NOXO1Q8NFA2 376 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 SNX18Q96RF0 628 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 C1orf198Q9H425 327 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 BEX1Q9HBH7 125 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 ZNF221Q9UK13 617 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 HHLA2Q9UM44 414 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 CCDC187A0A096LP49 1063 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 ZNF254O75437 659 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 ADRA2CP18825 462 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 ENPP1P22413 925 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 CSNK1A1P48729 337 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 ART1P52961 327 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 SRYQ05066 204 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 Q0VFX4 171 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 GPR176Q14439 515 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 WIPI1Q5MNZ9 446 aaPredicted RBP12.18□□□□□ -0.46
CLK3-203ENST00000454830 THEM4Q5T1C6 240 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 LRRC18Q8N456 261 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 FADS6Q8N9I5 356 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 NKD1Q969G9 470 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 LOXL4Q96JB6 756 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 KCNK15Q9H427 330 aa12.18□□□□□ -0.46
CLK3-203ENST00000454830 LOC107986453A0A1B0GWG9 222 aa12.17□□□□□ -0.46
CLK3-203ENST00000454830 UBL3O95164 117 aa12.17□□□□□ -0.46
CLK3-203ENST00000454830 PIGQQ9BRB3 760 aa12.17□□□□□ -0.46
CLK3-203ENST00000454830 TAS2R4Q9NYW5 299 aa12.17□□□□□ -0.46
CLK3-203ENST00000454830 LRFN1Q9P244 771 aa12.17□□□□□ -0.46
CLK3-203ENST00000454830 CGGBP1Q9UFW8 167 aaPredicted RBP12.17□□□□□ -0.46
CLK3-203ENST00000454830 GVINP1Q7Z2Y8 2422 aa12.17□□□□□ -0.46
CLK3-203ENST00000454830 IGLV3-32A0A0A0MS00 114 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms