RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 OR2V2Q96R30 315 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ZNF607Q96SK3 696 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 PRSS27Q9BQR3 290 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ZNF426Q9BUY5 554 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 SPATA5L1Q9BVQ7 753 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 CDADC1Q9BWV3 514 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 MRPL13Q9BYD1 178 aaKnown RBP5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 MS4A7Q9GZW8 240 aaPredicted RBP5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 DENND2DQ9H6A0 471 aaPredicted RBP5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 WDR76Q9H967 626 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 NKIRAS2Q9NYR9 191 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 PLEK2Q9NYT0 353 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 OR5V1Q9UGF6 321 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 GPR160Q9UJ42 338 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 ZNF229Q9UJW7 825 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 INSIG2Q9Y5U4 225 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 NPTNQ9Y639 398 aa5.03□□□□□ -1.6
HLA-DPA3-207ENST00000454398 TRAV27A0A087WT01 109 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 A0A1W2PRG6 482 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 FAM181BA6NEQ2 426 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 C22orf46C9J442 243 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 F5H0A9 414 aaPredicted RBP5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 M0QX08 132 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 DOK2O60496 412 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 OR7A10O76100 309 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 ABHD16AO95870 558 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 HIST1H2ABP04908 130 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 DBHP09172 617 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 GATA3P23771 443 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 OR1E2P47887 323 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 HTR5AP47898 357 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 IDH3AP50213 366 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 DAP3P51398 398 aaKnown RBP5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 RAG2P55895 527 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 TAS2R41P59536 307 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 IL13RA1P78552 427 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 MRPS34P82930 218 aaKnown RBP5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 SF3A3Q12874 501 aaKnown RBP eCLIP5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 PSG7Q13046 419 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 PIN1Q13526 163 aaPredicted RBP5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 HIST3H3Q16695 136 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 DEFB112Q30KQ8 113 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 ZNF718Q3SXZ3 478 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 ESCO2Q56NI9 601 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 MTX3Q5HYI7 312 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 RABL3Q5HYI8 236 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 C10orf128Q5T292 105 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 ARMC4Q5T2S8 1044 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 MBNL2Q5VZF2 373 aaKnown RBP5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 WDR93Q6P2C0 686 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 FIP1L1Q6UN15 594 aaKnown RBP5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 EPGNQ6UW88 154 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 DLEU7Q6UYE1 221 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 LINC00114Q6XXX2 140 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 HIST3H2AQ7L7L0 130 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 PDZD9Q8IXQ8 264 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 KIRREL3Q8IZU9 778 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 KLHL36Q8N4N3 616 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 SPICQ8N5J4 248 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 TEX29Q8N6K0 151 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 C11orf65Q8NCR3 313 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 OR52E2Q8NGJ4 325 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 OR1J2Q8NGS2 313 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 HIST1H2ACQ93077 130 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 POP5Q969H6 163 aaKnown RBP5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 TMIGD2Q96BF3 282 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 SGTBQ96EQ0 304 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 CCT8L2Q96SF2 557 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 SEPHS2Q99611 448 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 MRI1Q9BV20 369 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 PARD6BQ9BYG5 372 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 CHIAQ9BZP6 476 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 EGLN1Q9GZT9 426 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 LRMDAQ9H2I8 198 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 C1orf198Q9H425 327 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 TMEM38AQ9H6F2 299 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 NANOGQ9H9S0 305 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 NTN4Q9HB63 628 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 PATZ1Q9HBE1 687 aaKnown RBP5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 INIPQ9NRY2 104 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 NKIRAS1Q9NYS0 192 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 PTTG3PQ9NZH4 202 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 GMPR2Q9P2T1 348 aaKnown RBP5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 SH3GLB1Q9Y371 365 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 ADAM18Q9Y3Q7 739 aa5.02□□□□□ -1.61
HLA-DPA3-207ENST00000454398 IGHV2-70DA0A0C4DH43 119 aa5.01□□□□□ -1.61
HLA-DPA3-207ENST00000454398 A0A0G2JK05 382 aa5.01□□□□□ -1.61
HLA-DPA3-207ENST00000454398 A8MXK9 166 aa5.01□□□□□ -1.61
HLA-DPA3-207ENST00000454398 F5H5P2 479 aa5.01□□□□□ -1.61
HLA-DPA3-207ENST00000454398 H0YL77 283 aa5.01□□□□□ -1.61
HLA-DPA3-207ENST00000454398 FMO6PO60774 539 aa5.01□□□□□ -1.61
HLA-DPA3-207ENST00000454398 SERPINB7O75635 380 aa5.01□□□□□ -1.61
HLA-DPA3-207ENST00000454398 KNG1P01042 644 aa5.01□□□□□ -1.61
HLA-DPA3-207ENST00000454398 HLA-DPB1P04440 258 aa5.01□□□□□ -1.61
HLA-DPA3-207ENST00000454398 GPX2P18283 190 aa5.01□□□□□ -1.61
HLA-DPA3-207ENST00000454398 ANOS1P23352 680 aa5.01□□□□□ -1.61
HLA-DPA3-207ENST00000454398 GPR4P46093 362 aa5.01□□□□□ -1.61
HLA-DPA3-207ENST00000454398 YAP1P46937 504 aaKnown RBP5.01□□□□□ -1.61
HLA-DPA3-207ENST00000454398 SLC6A9P48067 706 aa5.01□□□□□ -1.61
HLA-DPA3-207ENST00000454398 SLC9A3P48764 834 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms