RNA–Protein interactions for RNA: ENST00000454354.1

USP40-210, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-210ENST00000454354 TIMM10BQ9Y5J6 103 aa10.3□□□□□ -0.76
USP40-210ENST00000454354 TEX13CA0A0J9YWL9 993 aa10.29□□□□□ -0.76
USP40-210ENST00000454354 LOC100289279A0A1B0GTE1 492 aa10.29□□□□□ -0.76
USP40-210ENST00000454354 A0A1W2PPL8 197 aa10.29□□□□□ -0.76
USP40-210ENST00000454354 C5orf49A4QMS7 147 aa10.29□□□□□ -0.76
USP40-210ENST00000454354 LRP5LA4QPB2 252 aa10.29□□□□□ -0.76
USP40-210ENST00000454354 H3BSA7 217 aa10.29□□□□□ -0.76
USP40-210ENST00000454354 ARPC2O15144 300 aa10.29□□□□□ -0.76
USP40-210ENST00000454354 RP2O75695 350 aa10.29□□□□□ -0.76
USP40-210ENST00000454354 DIRAS1O95057 198 aa10.29□□□□□ -0.76
USP40-210ENST00000454354 TXNDC12O95881 172 aa10.29□□□□□ -0.76
USP40-210ENST00000454354 IFNA2P01563 188 aa10.29□□□□□ -0.76
USP40-210ENST00000454354 SCG5P05408 212 aa10.29□□□□□ -0.76
USP40-210ENST00000454354 COX5BP10606 129 aa10.29□□□□□ -0.76
USP40-210ENST00000454354 CTLA4P16410 223 aa10.29□□□□□ -0.76
USP40-210ENST00000454354 TCN1P20061 433 aaPredicted RBP10.29□□□□□ -0.76
USP40-210ENST00000454354 IL2RGP31785 369 aa10.29□□□□□ -0.76
USP40-210ENST00000454354 GUCA1AP43080 201 aaPredicted RBP10.29□□□□□ -0.76
USP40-210ENST00000454354 GDI2P50395 445 aaKnown RBP10.29□□□□□ -0.76
USP40-210ENST00000454354 KRR1Q13601 381 aaKnown RBP10.29□□□□□ -0.76
USP40-210ENST00000454354 KRT72Q14CN4 511 aa10.29□□□□□ -0.76
USP40-210ENST00000454354 TRIP10Q15642 601 aa10.29□□□□□ -0.76
USP40-210ENST00000454354 MOGQ16653 247 aa10.29□□□□□ -0.76
USP40-210ENST00000454354 PCGF3Q3KNV8 242 aa10.29□□□□□ -0.76
USP40-210ENST00000454354 SPATS1Q496A3 300 aa10.29□□□□□ -0.76
USP40-210ENST00000454354 GPR139Q6DWJ6 353 aa10.29□□□□□ -0.76
USP40-210ENST00000454354 UNQ6126/PRO20091Q6UXV3 157 aa10.29□□□□□ -0.76
USP40-210ENST00000454354 THSD4Q6ZMP0 1018 aa10.29□□□□□ -0.76
USP40-210ENST00000454354 ADCK1Q86TW2 530 aa10.29□□□□□ -0.76
USP40-210ENST00000454354 ALDH16A1Q8IZ83 802 aa10.29□□□□□ -0.76
USP40-210ENST00000454354 OR1J1Q8NGS3 322 aa10.29□□□□□ -0.76
USP40-210ENST00000454354 SNX33Q8WV41 574 aa10.29□□□□□ -0.76
USP40-210ENST00000454354 RDH5Q92781 318 aa10.29□□□□□ -0.76
USP40-210ENST00000454354 YIPF5Q969M3 257 aa10.29□□□□□ -0.76
USP40-210ENST00000454354 RASD2Q96D21 266 aa10.29□□□□□ -0.76
USP40-210ENST00000454354 MARS2Q96GW9 593 aaKnown RBP10.29□□□□□ -0.76
USP40-210ENST00000454354 NSMCE2Q96MF7 247 aa10.29□□□□□ -0.76
USP40-210ENST00000454354 SHARPINQ9H0F6 387 aa10.29□□□□□ -0.76
USP40-210ENST00000454354 HINT3Q9NQE9 182 aaKnown RBP10.29□□□□□ -0.76
USP40-210ENST00000454354 NDE1Q9NXR1 346 aa10.29□□□□□ -0.76
USP40-210ENST00000454354 VSX1Q9NZR4 365 aaPredicted RBP10.29□□□□□ -0.76
USP40-210ENST00000454354 WNK2Q9Y3S1 2297 aa10.28□□□□□ -0.76
USP40-210ENST00000454354 UNC119BA6NIH7 251 aa10.28□□□□□ -0.76
USP40-210ENST00000454354 C12orf71A8MTZ7 269 aa10.28□□□□□ -0.76
USP40-210ENST00000454354 CCNOP22674 350 aa10.28□□□□□ -0.76
USP40-210ENST00000454354 COL8A2P25067 703 aa10.28□□□□□ -0.76
USP40-210ENST00000454354 MAGEB1P43366 347 aa10.28□□□□□ -0.76
USP40-210ENST00000454354 GPR6P46095 362 aaPredicted RBP10.28□□□□□ -0.76
USP40-210ENST00000454354 TMEM33P57088 247 aa10.28□□□□□ -0.76
USP40-210ENST00000454354 SMIM11AP58511 58 aa10.28□□□□□ -0.76
USP40-210ENST00000454354 ALKBH6Q3KRA9 238 aa10.28□□□□□ -0.76
USP40-210ENST00000454354 ZNF718Q3SXZ3 478 aa10.28□□□□□ -0.76
USP40-210ENST00000454354 TMEM255AQ5JRV8 349 aa10.28□□□□□ -0.76
USP40-210ENST00000454354 MBNL2Q5VZF2 373 aaKnown RBP10.28□□□□□ -0.76
USP40-210ENST00000454354 ZNF774Q6NX45 483 aa10.28□□□□□ -0.76
USP40-210ENST00000454354 TMEM154Q6P9G4 183 aa10.28□□□□□ -0.76
USP40-210ENST00000454354 SMARCD3Q6STE5 483 aa10.28□□□□□ -0.76
USP40-210ENST00000454354 UGT2A3Q6UWM9 527 aa10.28□□□□□ -0.76
USP40-210ENST00000454354 C16orf89Q6UX73 402 aa10.28□□□□□ -0.76
USP40-210ENST00000454354 DPY19L2P2Q6ZN68 376 aa10.28□□□□□ -0.76
USP40-210ENST00000454354 RFPL4BQ6ZWI9 263 aa10.28□□□□□ -0.76
USP40-210ENST00000454354 CXXC5Q7LFL8 322 aaKnown RBP10.28□□□□□ -0.76
USP40-210ENST00000454354 ICA1LQ8NDH6 482 aa10.28□□□□□ -0.76
USP40-210ENST00000454354 OR52J3Q8NH60 311 aa10.28□□□□□ -0.76
USP40-210ENST00000454354 IPCEF1Q8WWN9 437 aaPredicted RBP10.28□□□□□ -0.76
USP40-210ENST00000454354 SNX18Q96RF0 628 aa10.28□□□□□ -0.76
USP40-210ENST00000454354 CDRT15Q96T59 188 aa10.28□□□□□ -0.76
USP40-210ENST00000454354 GPA33Q99795 319 aa10.28□□□□□ -0.76
USP40-210ENST00000454354 BEX2Q9BXY8 128 aa10.28□□□□□ -0.76
USP40-210ENST00000454354 RACGAP1Q9H0H5 632 aa10.28□□□□□ -0.76
USP40-210ENST00000454354 SYT4Q9H2B2 425 aa10.28□□□□□ -0.76
USP40-210ENST00000454354 EMC7Q9NPA0 242 aa10.28□□□□□ -0.76
USP40-210ENST00000454354 ZNF275Q9NSD4 429 aaPredicted RBP10.28□□□□□ -0.76
USP40-210ENST00000454354 EIF3KQ9UBQ5 218 aaKnown RBP10.28□□□□□ -0.76
USP40-210ENST00000454354 NDRG4Q9ULP0 352 aaKnown RBP10.28□□□□□ -0.76
USP40-210ENST00000454354 AURKCQ9UQB9 309 aa10.28□□□□□ -0.76
USP40-210ENST00000454354 V9GYQ6 96 aa10.28□□□□□ -0.76
USP40-210ENST00000454354 DYSFO75923 2080 aa10.28□□□□□ -0.76
USP40-210ENST00000454354 GADD45GO95257 159 aa10.27□□□□□ -0.77
USP40-210ENST00000454354 TGFAP01135 160 aa10.27□□□□□ -0.77
USP40-210ENST00000454354 MT-ND5P03915 603 aa10.27□□□□□ -0.77
USP40-210ENST00000454354 FABP3P05413 133 aa10.27□□□□□ -0.77
USP40-210ENST00000454354 ADH4P08319 380 aa10.27□□□□□ -0.77
USP40-210ENST00000454354 FPR3P25089 353 aa10.27□□□□□ -0.77
USP40-210ENST00000454354 THBS2P35442 1172 aa10.27□□□□□ -0.77
USP40-210ENST00000454354 MPV17P39210 176 aa10.27□□□□□ -0.77
USP40-210ENST00000454354 MMP15P51511 669 aa10.27□□□□□ -0.77
USP40-210ENST00000454354 RPS6KA3P51812 740 aa10.27□□□□□ -0.77
USP40-210ENST00000454354 CDH15P55291 814 aa10.27□□□□□ -0.77
USP40-210ENST00000454354 SPIBQ01892 262 aa10.27□□□□□ -0.77
USP40-210ENST00000454354 SCRN3Q0VDG4 424 aa10.27□□□□□ -0.77
USP40-210ENST00000454354 AQP6Q13520 282 aa10.27□□□□□ -0.77
USP40-210ENST00000454354 PTCHD4Q6ZW05 846 aa10.27□□□□□ -0.77
USP40-210ENST00000454354 ZER1Q7Z7L7 766 aa10.27□□□□□ -0.77
USP40-210ENST00000454354 DEFB107AQ8IZN7 70 aa10.27□□□□□ -0.77
USP40-210ENST00000454354 LINC01356Q8N9X3 169 aa10.27□□□□□ -0.77
USP40-210ENST00000454354 FANK1Q8TC84 345 aa10.27□□□□□ -0.77
USP40-210ENST00000454354 KLF14Q8TD94 323 aaPredicted RBP10.27□□□□□ -0.77
USP40-210ENST00000454354 MCUR1Q96AQ8 359 aa10.27□□□□□ -0.77
USP40-210ENST00000454354 OR2J1Q9GZK6 312 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms