RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 OR14L1PQ8NHC6 308 aa14.21□□□□□ -0.13
SNX17-204ENST00000453453 FANK1Q8TC84 345 aa14.21□□□□□ -0.13
SNX17-204ENST00000453453 SLC25A43Q8WUT9 341 aaPredicted RBP14.21□□□□□ -0.13
SNX17-204ENST00000453453 CCDC120Q96HB5 630 aa14.21□□□□□ -0.13
SNX17-204ENST00000453453 ABHD1Q96SE0 405 aa14.21□□□□□ -0.13
SNX17-204ENST00000453453 PIGQQ9BRB3 760 aa14.21□□□□□ -0.13
SNX17-204ENST00000453453 HES7Q9BYE0 225 aa14.21□□□□□ -0.13
SNX17-204ENST00000453453 ZNF224Q9NZL3 707 aa14.21□□□□□ -0.13
SNX17-204ENST00000453453 MRPS18CQ9Y3D5 142 aaKnown RBP14.21□□□□□ -0.13
SNX17-204ENST00000453453 ZNF337Q9Y3M9 751 aa14.21□□□□□ -0.13
SNX17-204ENST00000453453 A0A1B0GUH1 482 aa14.2□□□□□ -0.14
SNX17-204ENST00000453453 A0A1W2PPL8 197 aa14.2□□□□□ -0.14
SNX17-204ENST00000453453 ACOT7O00154 380 aa14.2□□□□□ -0.14
SNX17-204ENST00000453453 OR2T1O43869 369 aa14.2□□□□□ -0.14
SNX17-204ENST00000453453 PEX14O75381 377 aa14.2□□□□□ -0.14
SNX17-204ENST00000453453 TRAPPC6AO75865 159 aa14.2□□□□□ -0.14
SNX17-204ENST00000453453 MPC2O95563 127 aa14.2□□□□□ -0.14
SNX17-204ENST00000453453 ECDO95905 644 aaPredicted RBP14.2□□□□□ -0.14
SNX17-204ENST00000453453 CH25HO95992 272 aa14.2□□□□□ -0.14
SNX17-204ENST00000453453 MT-ATP6P00846 226 aa14.2□□□□□ -0.14
SNX17-204ENST00000453453 HIST1H2ABP04908 130 aa14.2□□□□□ -0.14
SNX17-204ENST00000453453 ZNF250P15622 560 aa14.2□□□□□ -0.14
SNX17-204ENST00000453453 EGR4Q05215 589 aa14.2□□□□□ -0.14
SNX17-204ENST00000453453 KLF9Q13886 244 aaPredicted RBP14.2□□□□□ -0.14
SNX17-204ENST00000453453 ST3GAL2Q16842 350 aa14.2□□□□□ -0.14
SNX17-204ENST00000453453 C1orf140Q5VVS0 124 aa14.2□□□□□ -0.14
SNX17-204ENST00000453453 METTL11BQ5VVY1 283 aa14.2□□□□□ -0.14
SNX17-204ENST00000453453 HIST3H2AQ7L7L0 130 aa14.2□□□□□ -0.14
SNX17-204ENST00000453453 SIAH3Q8IW03 269 aa14.2□□□□□ -0.14
SNX17-204ENST00000453453 PIAS4Q8N2W9 510 aaPredicted RBP14.2□□□□□ -0.14
SNX17-204ENST00000453453 SLC43A2Q8N370 569 aa14.2□□□□□ -0.14
SNX17-204ENST00000453453 OR2T4Q8NH00 348 aa14.2□□□□□ -0.14
SNX17-204ENST00000453453 POC1BQ8TC44 478 aa14.2□□□□□ -0.14
SNX17-204ENST00000453453 GIMAP1Q8WWP7 306 aa14.2□□□□□ -0.14
SNX17-204ENST00000453453 PHYHIPQ92561 330 aa14.2□□□□□ -0.14
SNX17-204ENST00000453453 HIST1H2ACQ93077 130 aa14.2□□□□□ -0.14
SNX17-204ENST00000453453 HINT3Q9NQE9 182 aaKnown RBP14.2□□□□□ -0.14
SNX17-204ENST00000453453 NANSQ9NR45 359 aa14.2□□□□□ -0.14
SNX17-204ENST00000453453 RPH3AQ9Y2J0 694 aaPredicted RBP14.2□□□□□ -0.14
SNX17-204ENST00000453453 URB1O60287 2271 aaKnown RBP14.19□□□□□ -0.14
SNX17-204ENST00000453453 PINLYPA6NC86 204 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 SLC22A31A6NKX4 558 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 SHISA8B8ZZ34 492 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 KRBOX1C9JBD0 128 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 ZNF593O00488 134 aaPredicted RBP14.19□□□□□ -0.14
SNX17-204ENST00000453453 CDC42EP2O14613 210 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 TPPPO94811 219 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 HOXD4P09016 255 aaPredicted RBP14.19□□□□□ -0.14
SNX17-204ENST00000453453 BMP7P18075 431 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 FUT1P19526 365 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 CXCL3P19876 107 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 AP3S2P59780 193 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 ACTC1P68032 377 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 ACTA1P68133 377 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 FOXO1Q12778 655 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 ZNF74Q16587 644 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 UNQ6494/PRO21346Q6UXR6 183 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 KRT74Q7RTS7 529 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 OR13C2Q8NGS9 318 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 OR6S1Q8NH40 331 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 SMIM4Q8WVI0 70 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 KTI12Q96EK9 354 aaPredicted RBP14.19□□□□□ -0.14
SNX17-204ENST00000453453 IFT27Q9BW83 186 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 POTEKPQ9BYX7 375 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 TTTY12Q9BZ98 90 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 FKRPQ9H9S5 495 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 FBXL3Q9UKT7 428 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 DCHS1Q96JQ0 3298 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 ZIC3O60481 467 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 GIPP09681 153 aaPredicted RBP14.19□□□□□ -0.14
SNX17-204ENST00000453453 CPN1P15169 458 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 RAB3BP20337 219 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 GIFP27352 417 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 SHC1P29353 583 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 CALCRP30988 508 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 IGFL3Q6UXB1 125 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 MAMDC2Q7Z304 686 aaPredicted RBP14.19□□□□□ -0.14
SNX17-204ENST00000453453 OR6V1Q8N148 313 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 TAAR8Q969N4 342 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 OR11A1Q9GZK7 315 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 OR52D1Q9H346 318 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 UBQLN3Q9H347 655 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 ZNF703Q9H7S9 590 aaPredicted RBP14.19□□□□□ -0.14
SNX17-204ENST00000453453 C12orf4Q9NQ89 552 aa14.19□□□□□ -0.14
SNX17-204ENST00000453453 TRAV27A0A087WT01 109 aa14.18□□□□□ -0.14
SNX17-204ENST00000453453 DAPL1A0PJW8 107 aa14.18□□□□□ -0.14
SNX17-204ENST00000453453 ZC3H12DA2A288 527 aaKnown RBP14.18□□□□□ -0.14
SNX17-204ENST00000453453 OR2M5A3KFT3 312 aa14.18□□□□□ -0.14
SNX17-204ENST00000453453 GJE1A6NN92 205 aa14.18□□□□□ -0.14
SNX17-204ENST00000453453 LINC01387J3KSC0 135 aa14.18□□□□□ -0.14
SNX17-204ENST00000453453 SULT1B1O43704 296 aa14.18□□□□□ -0.14
SNX17-204ENST00000453453 SSNA1O43805 119 aa14.18□□□□□ -0.14
SNX17-204ENST00000453453 NPIPB7O75200 414 aa14.18□□□□□ -0.14
SNX17-204ENST00000453453 B3GALNT1O75752 331 aa14.18□□□□□ -0.14
SNX17-204ENST00000453453 RFPL3SP0C7P2 107 aa14.18□□□□□ -0.14
SNX17-204ENST00000453453 ENPP1P22413 925 aa14.18□□□□□ -0.14
SNX17-204ENST00000453453 PRPS1P60891 318 aa14.18□□□□□ -0.14
SNX17-204ENST00000453453 RAP2BP61225 183 aa14.18□□□□□ -0.14
SNX17-204ENST00000453453 MRPS10P82664 201 aaKnown RBP14.18□□□□□ -0.14
SNX17-204ENST00000453453 POU4F2Q12837 409 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms