RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 DDOQ99489 341 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 NMNAT2Q9BZQ4 307 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 NUAK2Q9H093 628 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 VCX3BQ9H321 246 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 C7orf69Q9H7B7 122 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 SEC61A2Q9H9S3 476 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 RNPEPL1Q9HAU8 725 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 CCNB1IP1Q9NPC3 277 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 RPRD1BQ9NQG5 326 aaKnown RBP7.6□□□□□ -1.19
COL28A1-205ENST00000453441 POLE4Q9NR33 117 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 B3GNT2Q9NY97 397 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 B9D1Q9UPM9 204 aa7.6□□□□□ -1.19
COL28A1-205ENST00000453441 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.59□□□□□ -1.19
COL28A1-205ENST00000453441 SCO2A0A1W2PP80 73 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 DEFB108AA8MXU0 73 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 PRR23D1E9PI22 279 aaPredicted RBP7.59□□□□□ -1.19
COL28A1-205ENST00000453441 H7C1C5 153 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 MPZL2O60487 215 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 TMCC2O75069 709 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 CTAG2O75638 210 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 CD3EP07766 207 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 IGFBP1P08833 259 aaPredicted RBP7.59□□□□□ -1.19
COL28A1-205ENST00000453441 PRR23D2P0DMB1 279 aaPredicted RBP7.59□□□□□ -1.19
COL28A1-205ENST00000453441 CAPZA2P47755 286 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 CDC42P60953 191 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 LCN6P62502 163 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 HSF2Q03933 536 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 TLE4Q04727 773 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 AQP6Q13520 282 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 SNAPC1Q16533 368 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 SGCAQ16586 387 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 SLC35D3Q5M8T2 416 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 ZNF362Q5T0B9 420 aaPredicted RBP7.59□□□□□ -1.19
COL28A1-205ENST00000453441 NCMAPQ5T1S8 102 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 LCN1P1Q5VSP4 162 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 FBXW10Q5XX13 1052 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 C12orf73Q69YU5 71 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 ACSM5Q6NUN0 579 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 SKA3Q8IX90 412 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 OR6V1Q8N148 313 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 PROKR2Q8NFJ6 384 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 SLC26A10Q8NG04 563 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 OR10H5Q8NGA6 315 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 OR8J1Q8NGP2 316 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 OR1J2Q8NGS2 313 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 HRASLS5Q96KN8 279 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 KCNS3Q9BQ31 491 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 TMEM204Q9BSN7 226 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 RIBC2Q9H4K1 309 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 RASSF1Q9NS23 344 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 SMPD3Q9NY59 655 aaPredicted RBP7.59□□□□□ -1.19
COL28A1-205ENST00000453441 ATPIF1Q9UII2 106 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 RNF115Q9Y4L5 304 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 TIMM10BQ9Y5J6 103 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 CENPEQ02224 2701 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 CADP27708 2225 aa7.59□□□□□ -1.19
COL28A1-205ENST00000453441 HEATR1Q9H583 2144 aaKnown RBP7.58□□□□□ -1.2
COL28A1-205ENST00000453441 IGKV1D-43A0A0B4J1Z2 117 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 IQCMA0A1B0GVH7 501 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 SNTNA6NMZ2 147 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 H0YJX3 145 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 MITFO75030 526 aaPredicted RBP7.58□□□□□ -1.2
COL28A1-205ENST00000453441 SEC14L2O76054 403 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 GLCEO94923 617 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 HLA-HP01893 362 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 CRYAAP02489 173 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 SERPINA5P05154 406 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 MMP7P09237 267 aaPredicted RBP7.58□□□□□ -1.2
COL28A1-205ENST00000453441 GAAP10253 952 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 COX5BP10606 129 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 CD79AP11912 226 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 ZNF823P16415 610 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 SPI1P17947 270 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 CD40P25942 277 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 FMO3P31513 532 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 ZNF83P51522 516 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 RAB1AP62820 205 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 TMED1Q13445 227 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 KEAP1Q14145 624 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 OGFRL1Q5TC84 451 aaPredicted RBP7.58□□□□□ -1.2
COL28A1-205ENST00000453441 NXNL2Q5VZ03 156 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 ADAM5Q6NVV9 412 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 UNQ6126/PRO20091Q6UXV3 157 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 CXXC5Q7LFL8 322 aaKnown RBP7.58□□□□□ -1.2
COL28A1-205ENST00000453441 MDP1Q86V88 176 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 GID4Q8IVV7 300 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 C1orf174Q8IYL3 243 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 IQCF1Q8N6M8 205 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 CYB561A3Q8NBI2 242 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 ZNF555Q8NEP9 628 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 GJC3Q8NFK1 279 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 OR4F15Q8NGB8 312 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 TMEM163Q8TC26 289 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 PIK3IP1Q96FE7 263 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 PLPPR2Q96GM1 343 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 PITX2Q99697 317 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 APOL4Q9BPW4 351 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 RERGLQ9H628 205 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 RNF121Q9H920 327 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 IMPAD1Q9NX62 359 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms