RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 ENTPD6O75354 484 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 WBP4O75554 376 aaKnown RBP10.11□□□□□ -0.79
SCN9A-204ENST00000452182 UBL3O95164 117 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 MPZL1O95297 269 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 GPANK1O95872 356 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 WNT11O96014 354 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 HLA-DQA2P01906 255 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 GSTT1P30711 240 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 PCBD1P61457 104 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 RPS7P62081 194 aaKnown RBP10.11□□□□□ -0.79
SCN9A-204ENST00000452182 AQP6Q13520 282 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 ENDOGQ14249 297 aaKnown RBP10.11□□□□□ -0.79
SCN9A-204ENST00000452182 TAB1Q15750 504 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 OXLD1Q5BKU9 147 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 UGT2A3Q6UWM9 527 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 SLC16A14Q7RTX9 510 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 DMRTC2Q8IXT2 367 aaPredicted RBP10.11□□□□□ -0.79
SCN9A-204ENST00000452182 TIGD4Q8IY51 512 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 DACH2Q96NX9 599 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 FOXN4Q96NZ1 517 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 SH3GL3Q99963 347 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 ZNF416Q9BWM5 594 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 KCNN2Q9H2S1 579 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 CLN6Q9NWW5 311 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 DNAJC27Q9NZQ0 273 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 COMMD3-BMI1R4GMX3 469 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 C19orf84I3L1E1 186 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 DENRO43583 198 aaKnown RBP10.11□□□□□ -0.79
SCN9A-204ENST00000452182 TMCC2O75069 709 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 THBDP07204 575 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 MMP7P09237 267 aaPredicted RBP10.11□□□□□ -0.79
SCN9A-204ENST00000452182 ZNF823P16415 610 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 ARR3P36575 388 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 ENTPD1P49961 510 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 HIST1H3AP68431 136 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 ADAM8P78325 824 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 POU4F2Q12837 409 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 CDK5R2Q13319 367 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 PPA1Q15181 289 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 GSG1Q2KHT4 349 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 C3orf36Q3SXR2 165 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 HIST2H3PS2Q5TEC6 136 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 SEZ6L2Q6UXD5 910 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 C22orf34Q6ZV56 151 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 HIST2H3AQ71DI3 136 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 LRRC18Q8N456 261 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 OR10H5Q8NGA6 315 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 OR52N5Q8NH56 324 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 HTRA1Q92743 480 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 ZMYND19Q96E35 227 aaPredicted RBP10.11□□□□□ -0.79
SCN9A-204ENST00000452182 FBXO17Q96EF6 278 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 WFIKKN1Q96NZ8 548 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 INTS14Q96SY0 518 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 SPOCK3Q9BQ16 436 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 MED18Q9BUE0 208 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 Q9H521 79 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 WDR76Q9H967 626 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 EMC7Q9NPA0 242 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 CRNNQ9UBG3 495 aaPredicted RBP10.11□□□□□ -0.79
SCN9A-204ENST00000452182 CYB5R1Q9UHQ9 305 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 FBXL3Q9UKT7 428 aa10.11□□□□□ -0.79
SCN9A-204ENST00000452182 GCN1Q92616 2671 aaKnown RBP10.1□□□□□ -0.79
SCN9A-204ENST00000452182 ZNF503-AS2A6NEH8 195 aa10.1□□□□□ -0.79
SCN9A-204ENST00000452182 TVP23AA6NH52 213 aa10.1□□□□□ -0.79
SCN9A-204ENST00000452182 PRSS44E7EML9 344 aa10.1□□□□□ -0.79
SCN9A-204ENST00000452182 CLDN1O95832 211 aa10.1□□□□□ -0.79
SCN9A-204ENST00000452182 IGKV3-15P01624 115 aa10.1□□□□□ -0.79
SCN9A-204ENST00000452182 HLA-HP01893 362 aa10.1□□□□□ -0.79
SCN9A-204ENST00000452182 CBR1P16152 277 aa10.1□□□□□ -0.79
SCN9A-204ENST00000452182 ZNF32P17041 273 aa10.1□□□□□ -0.79
SCN9A-204ENST00000452182 MTNR1AP48039 350 aa10.1□□□□□ -0.79
SCN9A-204ENST00000452182 RAB1AP62820 205 aa10.1□□□□□ -0.79
SCN9A-204ENST00000452182 SCRN3Q0VDG4 424 aa10.1□□□□□ -0.79
SCN9A-204ENST00000452182 MEP1BQ16820 701 aa10.1□□□□□ -0.79
SCN9A-204ENST00000452182 LYPD4Q6UWN0 246 aa10.1□□□□□ -0.79
SCN9A-204ENST00000452182 SHFQ7M4L6 423 aa10.1□□□□□ -0.79
SCN9A-204ENST00000452182 GJC3Q8NFK1 279 aa10.1□□□□□ -0.79
SCN9A-204ENST00000452182 FGFBP3Q8TAT2 258 aa10.1□□□□□ -0.79
SCN9A-204ENST00000452182 ZNF75AQ96N20 296 aa10.1□□□□□ -0.79
SCN9A-204ENST00000452182 PSMG3-AS1Q96PY0 264 aa10.1□□□□□ -0.79
SCN9A-204ENST00000452182 CDADC1Q9BWV3 514 aa10.1□□□□□ -0.79
SCN9A-204ENST00000452182 ADGRL4Q9HBW9 690 aa10.1□□□□□ -0.79
SCN9A-204ENST00000452182 MRPS18AQ9NVS2 196 aaKnown RBP10.1□□□□□ -0.79
SCN9A-204ENST00000452182 ASH2LQ9UBL3 628 aa10.1□□□□□ -0.79
SCN9A-204ENST00000452182 AASSQ9UDR5 926 aa10.1□□□□□ -0.79
SCN9A-204ENST00000452182 RPL36Q9Y3U8 105 aaKnown RBP10.1□□□□□ -0.79
SCN9A-204ENST00000452182 TIMM10BQ9Y5J6 103 aa10.1□□□□□ -0.79
SCN9A-204ENST00000452182 LHFPL6Q9Y693 200 aa10.1□□□□□ -0.79
SCN9A-204ENST00000452182 LRRK2Q5S007 2527 aa10.09□□□□□ -0.79
SCN9A-204ENST00000452182 ZNF593O00488 134 aaPredicted RBP10.09□□□□□ -0.79
SCN9A-204ENST00000452182 IGLV1-44P01699 117 aa10.09□□□□□ -0.79
SCN9A-204ENST00000452182 SBK2P0C263 348 aa10.09□□□□□ -0.79
SCN9A-204ENST00000452182 EPXP11678 715 aa10.09□□□□□ -0.79
SCN9A-204ENST00000452182 CD79AP11912 226 aa10.09□□□□□ -0.79
SCN9A-204ENST00000452182 KIR2DL3P43628 341 aa10.09□□□□□ -0.79
SCN9A-204ENST00000452182 CAPZA2P47755 286 aa10.09□□□□□ -0.79
SCN9A-204ENST00000452182 CXCR4P61073 352 aa10.09□□□□□ -0.79
SCN9A-204ENST00000452182 CSNK2BP67870 215 aa10.09□□□□□ -0.79
SCN9A-204ENST00000452182 SLC18B1Q6NT16 456 aa10.09□□□□□ -0.79
SCN9A-204ENST00000452182 TMEM53Q6P2H8 277 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms