RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 TRBV5-7A0A0A0MS05 114 aa9.57□□□□□ -0.88
PKP4-206ENST00000452162 A6NIZ1 184 aa9.57□□□□□ -0.88
PKP4-206ENST00000452162 LIPT2A6NK58 231 aa9.57□□□□□ -0.88
PKP4-206ENST00000452162 ITGA10O75578 1167 aa9.57□□□□□ -0.88
PKP4-206ENST00000452162 KIR3DL2P43630 455 aa9.57□□□□□ -0.88
PKP4-206ENST00000452162 ZNF41P51814 821 aaPredicted RBP9.57□□□□□ -0.88
PKP4-206ENST00000452162 MAP2K6P52564 334 aa9.57□□□□□ -0.88
PKP4-206ENST00000452162 RAP1BP61224 184 aa9.57□□□□□ -0.88
PKP4-206ENST00000452162 RAP1AP62834 184 aa9.57□□□□□ -0.88
PKP4-206ENST00000452162 GLCCI1Q86VQ1 547 aa9.57□□□□□ -0.88
PKP4-206ENST00000452162 WDFY1Q8IWB7 410 aa9.57□□□□□ -0.88
PKP4-206ENST00000452162 KDM8Q8N371 416 aa9.57□□□□□ -0.88
PKP4-206ENST00000452162 OR2M3Q8NG83 312 aa9.57□□□□□ -0.88
PKP4-206ENST00000452162 OR6F1Q8NGZ6 308 aa9.57□□□□□ -0.88
PKP4-206ENST00000452162 LGALS14Q8TCE9 139 aa9.57□□□□□ -0.88
PKP4-206ENST00000452162 ASB17Q8WXJ9 295 aa9.57□□□□□ -0.88
PKP4-206ENST00000452162 SLC39A7Q92504 469 aa9.57□□□□□ -0.88
PKP4-206ENST00000452162 NSMAFQ92636 917 aa9.57□□□□□ -0.88
PKP4-206ENST00000452162 RFT1Q96AA3 541 aa9.57□□□□□ -0.88
PKP4-206ENST00000452162 C4orf45Q96LM5 186 aa9.57□□□□□ -0.88
PKP4-206ENST00000452162 CMTM3Q96MX0 182 aa9.57□□□□□ -0.88
PKP4-206ENST00000452162 THAP7Q9BT49 309 aaPredicted RBP9.57□□□□□ -0.88
PKP4-206ENST00000452162 SDHAF3Q9NRP4 125 aa9.57□□□□□ -0.88
PKP4-206ENST00000452162 TEKT2Q9UIF3 430 aa9.57□□□□□ -0.88
PKP4-206ENST00000452162 TMEM212A6NML5 194 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 IFITM5A6NNB3 132 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 AIPO00170 330 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 TMEM127O75204 238 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 SLC43A1O75387 559 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 ZNF254O75437 659 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 CCNKO75909 580 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 HLA-DQA2P01906 255 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 PRB1P04280 392 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 TRAPPC2P0DI81 140 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 TRAPPC2BP0DI82 140 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 NAT2P11245 290 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 ICAM2P13598 275 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 MAPK3P27361 379 aaPredicted RBP9.56□□□□□ -0.88
PKP4-206ENST00000452162 CRABP1P29762 137 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 NR4A2P43354 598 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 ROM1Q03395 351 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 SLC17A1Q14916 467 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 EXT1Q16394 746 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 B3GNTL1Q67FW5 361 aaPredicted RBP9.56□□□□□ -0.88
PKP4-206ENST00000452162 SLC18B1Q6NT16 456 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 M1APQ8TC57 530 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 FRMD6Q96NE9 622 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 HDHD2Q9H0R4 259 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 FANCFQ9NPI8 374 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 ALKBH4Q9NXW9 302 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 HMX3A6NHT5 357 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 ZNF432O94892 652 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 UBL3O95164 117 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 SPARCP09486 303 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 IFNGR1P15260 489 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 PTGS2P35354 604 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 INPP1P49441 399 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 DAP3P51398 398 aaKnown RBP9.56□□□□□ -0.88
PKP4-206ENST00000452162 RASGEF1BQ0VAM2 473 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 MEP1BQ16820 701 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 WDR38Q5JTN6 314 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 UBE2NLQ5JXB2 153 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 HACD4Q5VWC8 232 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 ZNF57Q68EA5 555 aaPredicted RBP9.56□□□□□ -0.88
PKP4-206ENST00000452162 LRRN1Q6UXK5 716 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 STAC2Q6ZMT1 411 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 SLC35D2Q76EJ3 337 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 LRRTM1Q86UE6 522 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 ZNF679Q8IYX0 411 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 FADS6Q8N9I5 356 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 KCNK17Q96T54 332 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 ELOVL3Q9HB03 270 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 CLEC4AQ9UMR7 237 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 V9GY05 133 aa9.56□□□□□ -0.88
PKP4-206ENST00000452162 FAM240BA0A1B0GVZ2 78 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 A0A1W2PNV4 684 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 NPIPA5E9PKD4 350 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 EEF1E1O43324 174 aaKnown RBP9.55□□□□□ -0.88
PKP4-206ENST00000452162 ADRA2CP18825 462 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 DPP4P27487 766 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 SOX2P48431 317 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 CLDN20P56880 219 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 ADAM8P78325 824 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 HSF1Q00613 529 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 GPR176Q14439 515 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 INPP5JQ15735 1006 aaPredicted RBP9.55□□□□□ -0.88
PKP4-206ENST00000452162 TEX30Q5JUR7 227 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 HES5Q5TA89 166 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 FAM205BPQ63HN1 556 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 PLET1Q6UQ28 207 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 BAIAP2L2Q6UXY1 529 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 NHLRC1Q6VVB1 395 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 LINC00696Q6ZRV3 163 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 ASB18Q6ZVZ8 466 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.55□□□□□ -0.88
PKP4-206ENST00000452162 ZNF676Q8N7Q3 588 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 OR10AC1Q8NH08 325 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 ZNF671Q8TAW3 534 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 RNF128Q8TEB7 428 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 SLC25A38Q96DW6 304 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms