RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 P2RY1P47900 373 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 SELENOPP49908 381 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 CDKN2DP55273 166 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 CLDN12P56749 244 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 RAB38P57729 211 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 SIRPAP78324 504 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 FABP5Q01469 135 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 ZNF252P-AS1Q0IIN9 211 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 PDE7AQ13946 482 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 PTPRCAPQ14761 206 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 TAF1CQ15572 869 aaPredicted RBP2.03□□□□□ -2.09
USP53-202ENST00000450251 SMIM21Q3B7S5 101 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 MIDNQ504T8 468 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 KHDC3LQ587J8 217 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 ARSJQ5FYB0 599 aaPredicted RBP2.03□□□□□ -2.09
USP53-202ENST00000450251 ENTPD8Q5MY95 495 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 CLEC18BQ6UXF7 455 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 ZNF66Q6ZN08 573 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 MBOAT2Q6ZWT7 520 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 FCRLAQ7L513 359 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 LAS2Q8IYD9 372 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 PRSS58Q8IYP2 241 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 ARRDC1Q8N5I2 433 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 KRTCAP2Q8N6L1 136 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 COX18Q8N8Q8 333 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 ZNF511Q8NB15 262 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 SUMF1Q8NBK3 374 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 TP53I13Q8NBR0 393 aaPredicted RBP2.03□□□□□ -2.09
USP53-202ENST00000450251 OR9A4Q8NGU2 314 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 ADAMTS17Q8TE56 1095 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 NKD1Q969G9 470 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 WDR92Q96MX6 357 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 SLC46A1Q96NT5 459 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 CDCA3Q99618 268 aaPredicted RBP2.03□□□□□ -2.09
USP53-202ENST00000450251 G6PC3Q9BUM1 346 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 ELOVL1Q9BW60 279 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 MS4A7Q9GZW8 240 aaPredicted RBP2.03□□□□□ -2.09
USP53-202ENST00000450251 ZNF430Q9H8G1 570 aaPredicted RBP2.03□□□□□ -2.09
USP53-202ENST00000450251 ZNF331Q9NQX6 463 aaPredicted RBP2.03□□□□□ -2.09
USP53-202ENST00000450251 ZCCHC3Q9NUD5 404 aaKnown RBP2.03□□□□□ -2.09
USP53-202ENST00000450251 MRPS18AQ9NVS2 196 aaKnown RBP2.03□□□□□ -2.09
USP53-202ENST00000450251 GALPQ9UBC7 116 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 FBXW2Q9UKT8 454 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 FOXJ3Q9UPW0 622 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 LAMP3Q9UQV4 416 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 ZFP30Q9Y2G7 519 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 B3GALT1Q9Y5Z6 326 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 CFAP20Q9Y6A4 193 aaKnown RBP2.03□□□□□ -2.09
USP53-202ENST00000450251 SNED1Q8TER0 1413 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 MYH9P35579 1960 aaKnown RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 TMEM269A0A1B0GVZ9 245 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 ZNF320A2RRD8 509 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 BLACEA4D250 179 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 RBFOX3A6NFN3 312 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 YDJCA8MPS7 323 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 VSTM5A8MXK1 200 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 TISP43B9A030 160 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 PRRG1O14668 218 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 ST8SIA3O43173 380 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 KLK8O60259 260 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 OR2A4O95047 310 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 KLF8O95600 359 aaPredicted RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 DUS4LO95620 317 aaKnown RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 KLK3P07288 261 aaPredicted RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 ASGR2P07307 311 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 MMP2P08253 660 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 CYC1P08574 325 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 OR5G3P0C626 314 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 TCN2P20062 427 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 RPS12P25398 132 aaKnown RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 S100A7P31151 101 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 HOXA9P31269 272 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 CD200P41217 278 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 GPR4P46093 362 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 CTSCP53634 463 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 PLP1P60201 277 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 CSNK1G2P78368 415 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 PAX5Q02548 391 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 MSMO1Q15800 293 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 RTL8BQ17RB0 113 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 PRTGQ2VWP7 1150 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 ZNF528Q3MIS6 628 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 MARCH8Q5T0T0 291 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 ZNF660Q6AZW8 331 aaPredicted RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 ZNF787Q6DD87 383 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 MRPL54Q6P161 138 aaKnown RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 PLBD1Q6P4A8 553 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 TNFAIP8L2Q6P589 184 aaPredicted RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 TMEM182Q6ZP80 229 aaPredicted RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 ZNF534Q76KX8 674 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 S100A7AQ86SG5 101 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 LRRTM4Q86VH4 590 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 LRP11Q86VZ4 500 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 NIT1Q86X76 327 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 ZFP41Q8N8Y5 198 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 OR51S1Q8NGJ8 323 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 OR4C16Q8NGL9 310 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 OR9A2Q8NGT5 310 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 NUBPLQ8TB37 319 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 ZCCHC10Q8TBK6 192 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms