RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 TRBV6-7A0A0A0MS04 114 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 A0A1B0GTI1 187 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 A0A1B0GW64 132 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 TMEM129A0AVI4 362 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 OTOL1A6NHN0 477 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 NPIPB15A6NHN6 443 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 FAM183AA6NL82 134 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 GABRR3A8MPY1 467 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 A8MT66 165 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 SULT2B1O00204 365 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 BHLHE40O14503 412 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 PPP1R2P9O14990 202 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 CLIC2O15247 247 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 MAGEB4O15481 346 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 ZNF264O43296 627 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 TNFSF14O43557 240 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 RNF13O43567 381 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 NARSO43776 548 aaKnown RBP3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 SOX15O60248 233 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 CDC40O60508 579 aaKnown RBP eCLIP3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 CYTIPO60759 359 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 HIST1H2BKO60814 126 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 CLDN11O75508 207 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 ADAP1O75689 374 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 RHBDL1O75783 438 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 GRAP2O75791 330 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 UBL3O95164 117 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 VNN2O95498 520 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 AIFM1O95831 613 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 CFIP05156 583 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 HIST1H2BJP06899 126 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 UMODP07911 640 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 CD14P08571 375 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 ARSAP15289 507 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 ELK1P19419 428 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 PRKACGP22612 351 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 HIST1H2BOP23527 126 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 CPT2P23786 658 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 GABRR2P28476 465 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 CD1BP29016 333 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 AGTR1P30556 359 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 HOXC9P31274 260 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 GABRA5P31644 462 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 MC5RP33032 325 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 HIST1H2BBP33778 126 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 RPL3P39023 403 aaKnown RBP3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 NPY4RP50391 375 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 METAP1P53582 386 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 OR10A3P58181 314 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 HIST1H2BDP58876 126 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 DAOAP59103 153 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 RPL7AP62424 266 aaKnown RBP3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 HIST1H2BCP62807 126 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 TLE3Q04726 772 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 MXD1Q05195 221 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 BCL2L1Q07817 233 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 PLA2G7Q13093 441 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 UBE2V1Q13404 147 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 SNTB2Q13425 540 aaKnown RBP3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 KIAA0141Q14154 515 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 HERPUD1Q15011 391 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 GUK1Q16774 197 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 HIST2H2BEQ16778 126 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 ZNF766Q5HY98 468 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 C9orf135Q5VTT2 229 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 ATG9BQ674R7 924 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 SP5Q6BEB4 398 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 KIAA0930Q6ICG6 404 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 ACSM6Q6P461 480 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 ZNF790Q6PG37 636 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 SLC22A25Q6T423 547 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 IL27RAQ6UWB1 636 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 LINGO4Q6UY18 593 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 WDR88Q6ZMY6 472 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 ASB18Q6ZVZ8 466 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 SLC35D2Q76EJ3 337 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 SLC36A1Q7Z2H8 476 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 ABHD12BQ7Z5M8 362 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 WDR53Q7Z5U6 358 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 LRRTM1Q86UE6 522 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 CBWD2Q8IUF1 395 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 TRAPPC5Q8IUR0 188 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 MSRB3Q8IXL7 192 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 C1orf87Q8N0U7 546 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 AMER3Q8N944 861 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 MRPL43Q8N983 215 aaKnown RBP3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 RELL2Q8NC24 303 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 B3GNT7Q8NFL0 401 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 OR51S1Q8NGJ8 323 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 OR5L2Q8NGL0 311 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 OR1J4Q8NGS1 313 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 OR52P1PQ8NH57 321 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 SPPL2AQ8TCT8 520 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 CXorf40AQ8TE69 158 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 CLEC4CQ8WTT0 213 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 NPRL2Q8WTW4 380 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 CASTOR1Q8WTX7 329 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 SOCS4Q8WXH5 440 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 TMEM234Q8WY98 164 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms