RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 ST7LQ8TDW4 575 aa13.14□□□□□ -0.31
TRA2A-203ENST00000448549 LRRC58Q96CX6 371 aa13.14□□□□□ -0.31
TRA2A-203ENST00000448549 BPIFA2Q96DR5 249 aa13.14□□□□□ -0.31
TRA2A-203ENST00000448549 C4orf45Q96LM5 186 aa13.14□□□□□ -0.31
TRA2A-203ENST00000448549 DCLRE1CQ96SD1 692 aaKnown RBP13.14□□□□□ -0.31
TRA2A-203ENST00000448549 ALG12Q9BV10 488 aa13.14□□□□□ -0.31
TRA2A-203ENST00000448549 ZDHHC8Q9ULC8 765 aa13.14□□□□□ -0.31
TRA2A-203ENST00000448549 A0A1W2PPL8 197 aa13.13□□□□□ -0.31
TRA2A-203ENST00000448549 ICMTO60725 284 aa13.13□□□□□ -0.31
TRA2A-203ENST00000448549 EDF1O60869 148 aaKnown RBP13.13□□□□□ -0.31
TRA2A-203ENST00000448549 IFNA14P01570 189 aa13.13□□□□□ -0.31
TRA2A-203ENST00000448549 CD55P08174 381 aa13.13□□□□□ -0.31
TRA2A-203ENST00000448549 SBK2P0C263 348 aa13.13□□□□□ -0.31
TRA2A-203ENST00000448549 IFI30P13284 250 aa13.13□□□□□ -0.31
TRA2A-203ENST00000448549 GUCA1AP43080 201 aaPredicted RBP13.13□□□□□ -0.31
TRA2A-203ENST00000448549 CTXN1P60606 82 aa13.13□□□□□ -0.31
TRA2A-203ENST00000448549 PCBD1P61457 104 aa13.13□□□□□ -0.31
TRA2A-203ENST00000448549 UBA52P62987 128 aaKnown RBP13.13□□□□□ -0.31
TRA2A-203ENST00000448549 TNFAIP6P98066 277 aaPredicted RBP13.13□□□□□ -0.31
TRA2A-203ENST00000448549 TAF11Q15544 211 aa13.13□□□□□ -0.31
TRA2A-203ENST00000448549 CYBRD1Q53TN4 286 aa13.13□□□□□ -0.31
TRA2A-203ENST00000448549 MICU2Q8IYU8 434 aa13.13□□□□□ -0.31
TRA2A-203ENST00000448549 OR8J3Q8NGG0 315 aa13.13□□□□□ -0.31
TRA2A-203ENST00000448549 C10orf82Q8WW14 230 aa13.13□□□□□ -0.31
TRA2A-203ENST00000448549 DVL3Q92997 716 aaPredicted RBP13.13□□□□□ -0.31
TRA2A-203ENST00000448549 TPD52L3Q96J77 140 aa13.13□□□□□ -0.31
TRA2A-203ENST00000448549 ZNF583Q96ND8 569 aa13.13□□□□□ -0.31
TRA2A-203ENST00000448549 DIRC2Q96SL1 478 aa13.13□□□□□ -0.31
TRA2A-203ENST00000448549 CGGBP1Q9UFW8 167 aaPredicted RBP13.13□□□□□ -0.31
TRA2A-203ENST00000448549 PPIAL4AQ9Y536 164 aa13.13□□□□□ -0.31
TRA2A-203ENST00000448549 NPTNQ9Y639 398 aa13.13□□□□□ -0.31
TRA2A-203ENST00000448549 H3BSA7 217 aa13.12□□□□□ -0.31
TRA2A-203ENST00000448549 TIMM8AO60220 97 aaPredicted RBP13.12□□□□□ -0.31
TRA2A-203ENST00000448549 FOXH1O75593 365 aa13.12□□□□□ -0.31
TRA2A-203ENST00000448549 IGHMP01871 453 aa13.12□□□□□ -0.31
TRA2A-203ENST00000448549 SCG5P05408 212 aa13.12□□□□□ -0.31
TRA2A-203ENST00000448549 FUT4P22083 530 aa13.12□□□□□ -0.31
TRA2A-203ENST00000448549 ARHGDIAP52565 204 aa13.12□□□□□ -0.31
TRA2A-203ENST00000448549 ST3GAL3Q11203 375 aa13.12□□□□□ -0.31
TRA2A-203ENST00000448549 PSG7Q13046 419 aa13.12□□□□□ -0.31
TRA2A-203ENST00000448549 ENDOGQ14249 297 aaKnown RBP13.12□□□□□ -0.31
TRA2A-203ENST00000448549 LRRC23Q53EV4 343 aaPredicted RBP13.12□□□□□ -0.31
TRA2A-203ENST00000448549 ZMAT1Q5H9K5 638 aa13.12□□□□□ -0.31
TRA2A-203ENST00000448549 MTX3Q5HYI7 312 aa13.12□□□□□ -0.31
TRA2A-203ENST00000448549 ERICH5Q6P6B1 374 aa13.12□□□□□ -0.31
TRA2A-203ENST00000448549 FOXL2NBQ6ZUU3 175 aa13.12□□□□□ -0.31
TRA2A-203ENST00000448549 LRRC75AQ8NAA5 344 aa13.12□□□□□ -0.31
TRA2A-203ENST00000448549 DEFB108BQ8NET1 73 aa13.12□□□□□ -0.31
TRA2A-203ENST00000448549 OR51A7Q8NH64 312 aa13.12□□□□□ -0.31
TRA2A-203ENST00000448549 FNDC8Q8TC99 324 aa13.12□□□□□ -0.31
TRA2A-203ENST00000448549 SIKE1Q9BRV8 207 aa13.12□□□□□ -0.31
TRA2A-203ENST00000448549 ELOVL3Q9HB03 270 aa13.12□□□□□ -0.31
TRA2A-203ENST00000448549 NTN4Q9HB63 628 aa13.12□□□□□ -0.31
TRA2A-203ENST00000448549 MMP26Q9NRE1 261 aa13.12□□□□□ -0.31
TRA2A-203ENST00000448549 DDX28Q9NUL7 540 aaKnown RBP13.12□□□□□ -0.31
TRA2A-203ENST00000448549 EGFL7Q9UHF1 273 aa13.12□□□□□ -0.31
TRA2A-203ENST00000448549 A4GNTQ9UNA3 340 aa13.12□□□□□ -0.31
TRA2A-203ENST00000448549 PPIAL4EA0A075B759 164 aa13.11□□□□□ -0.31
TRA2A-203ENST00000448549 TRAV27A0A087WT01 109 aa13.11□□□□□ -0.31
TRA2A-203ENST00000448549 PPIAL4CA0A0B4J2A2 164 aa13.11□□□□□ -0.31
TRA2A-203ENST00000448549 C12orf71A8MTZ7 269 aa13.11□□□□□ -0.31
TRA2A-203ENST00000448549 PPIAL4DF5H284 164 aa13.11□□□□□ -0.31
TRA2A-203ENST00000448549 H7C1C5 153 aa13.11□□□□□ -0.31
TRA2A-203ENST00000448549 IGHV2-70P01814 119 aa13.11□□□□□ -0.31
TRA2A-203ENST00000448549 PPIAL4FP0DN26 164 aa13.11□□□□□ -0.31
TRA2A-203ENST00000448549 MSR1P21757 451 aa13.11□□□□□ -0.31
TRA2A-203ENST00000448549 KDELR2P33947 212 aa13.11□□□□□ -0.31
TRA2A-203ENST00000448549 YAP1P46937 504 aaKnown RBP13.11□□□□□ -0.31
TRA2A-203ENST00000448549 LCN6P62502 163 aa13.11□□□□□ -0.31
TRA2A-203ENST00000448549 CDK5R2Q13319 367 aa13.11□□□□□ -0.31
TRA2A-203ENST00000448549 ARL9Q6T311 187 aa13.11□□□□□ -0.31
TRA2A-203ENST00000448549 RBMS3Q6XE24 437 aaKnown RBP13.11□□□□□ -0.31
TRA2A-203ENST00000448549 NRMQ8IXM6 262 aa13.11□□□□□ -0.31
TRA2A-203ENST00000448549 SIGLECL1Q8N7X8 197 aa13.11□□□□□ -0.31
TRA2A-203ENST00000448549 PRRC1Q96M27 445 aa13.11□□□□□ -0.31
TRA2A-203ENST00000448549 TMEM120AQ9BXJ8 343 aa13.11□□□□□ -0.31
TRA2A-203ENST00000448549 POFUT1Q9H488 388 aa13.11□□□□□ -0.31
TRA2A-203ENST00000448549 EMC7Q9NPA0 242 aa13.11□□□□□ -0.31
TRA2A-203ENST00000448549 TMEM106BQ9NUM4 274 aa13.11□□□□□ -0.31
TRA2A-203ENST00000448549 RHCGQ9UBD6 479 aa13.11□□□□□ -0.31
TRA2A-203ENST00000448549 PURGQ9UJV8 347 aaKnown RBP13.11□□□□□ -0.31
TRA2A-203ENST00000448549 HTR3EA5X5Y0 456 aa13.1□□□□□ -0.31
TRA2A-203ENST00000448549 A6NIZ1 184 aa13.1□□□□□ -0.31
TRA2A-203ENST00000448549 HMGB1P1B2RPK0 211 aaPredicted RBP13.1□□□□□ -0.31
TRA2A-203ENST00000448549 TRAPPC2LH3BP13 241 aa13.1□□□□□ -0.31
TRA2A-203ENST00000448549 MRASO14807 208 aa13.1□□□□□ -0.31
TRA2A-203ENST00000448549 ABHD16AO95870 558 aa13.1□□□□□ -0.31
TRA2A-203ENST00000448549 NPPAP01160 153 aa13.1□□□□□ -0.31
TRA2A-203ENST00000448549 RAP1BP61224 184 aa13.1□□□□□ -0.31
TRA2A-203ENST00000448549 SEC61A1P61619 476 aaKnown RBP13.1□□□□□ -0.31
TRA2A-203ENST00000448549 RAP1AP62834 184 aa13.1□□□□□ -0.31
TRA2A-203ENST00000448549 SELENOWP63302 87 aa13.1□□□□□ -0.31
TRA2A-203ENST00000448549 FHL1Q13642 323 aa13.1□□□□□ -0.31
TRA2A-203ENST00000448549 COQ5Q5HYK3 327 aa13.1□□□□□ -0.31
TRA2A-203ENST00000448549 FAM205BPQ63HN1 556 aa13.1□□□□□ -0.31
TRA2A-203ENST00000448549 ZER1Q7Z7L7 766 aa13.1□□□□□ -0.31
TRA2A-203ENST00000448549 SYT9Q86SS6 491 aa13.1□□□□□ -0.31
TRA2A-203ENST00000448549 KLHL36Q8N4N3 616 aa13.1□□□□□ -0.31
TRA2A-203ENST00000448549 OR2Z1Q8NG97 314 aa13.1□□□□□ -0.31
TRA2A-203ENST00000448549 C1QTNF5Q9BXJ0 243 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms