RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 APOBEC3AP31941 199 aaPredicted RBP12.15□□□□□ -0.46
GTF3C3-206ENST00000448539 TTKP33981 857 aa12.15□□□□□ -0.46
GTF3C3-206ENST00000448539 DAPP51397 102 aa12.15□□□□□ -0.46
GTF3C3-206ENST00000448539 ART1P52961 327 aa12.15□□□□□ -0.46
GTF3C3-206ENST00000448539 LSM6P62312 80 aaKnown RBP12.15□□□□□ -0.46
GTF3C3-206ENST00000448539 PSG4Q00888 419 aa12.15□□□□□ -0.46
GTF3C3-206ENST00000448539 DAG1Q14118 895 aa12.15□□□□□ -0.46
GTF3C3-206ENST00000448539 ENDOGQ14249 297 aaKnown RBP12.15□□□□□ -0.46
GTF3C3-206ENST00000448539 KRT80Q6KB66 452 aa12.15□□□□□ -0.46
GTF3C3-206ENST00000448539 UGT2A3Q6UWM9 527 aa12.15□□□□□ -0.46
GTF3C3-206ENST00000448539 B3GLCTQ6Y288 498 aa12.15□□□□□ -0.46
GTF3C3-206ENST00000448539 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.15□□□□□ -0.46
GTF3C3-206ENST00000448539 ZBTB46Q86UZ6 589 aa12.15□□□□□ -0.46
GTF3C3-206ENST00000448539 MUC15Q8N387 334 aa12.15□□□□□ -0.46
GTF3C3-206ENST00000448539 PARP8Q8N3A8 854 aa12.15□□□□□ -0.46
GTF3C3-206ENST00000448539 NUP37Q8NFH4 326 aa12.15□□□□□ -0.46
GTF3C3-206ENST00000448539 AKR7LQ8NHP1 331 aa12.15□□□□□ -0.46
GTF3C3-206ENST00000448539 C11orf40Q8WZ69 217 aa12.15□□□□□ -0.46
GTF3C3-206ENST00000448539 OTULINQ96BN8 352 aa12.15□□□□□ -0.46
GTF3C3-206ENST00000448539 PKP2Q99959 881 aa12.15□□□□□ -0.46
GTF3C3-206ENST00000448539 CDADC1Q9BWV3 514 aa12.15□□□□□ -0.46
GTF3C3-206ENST00000448539 OR2H1Q9GZK4 316 aa12.15□□□□□ -0.46
GTF3C3-206ENST00000448539 GABARAPL1Q9H0R8 117 aa12.15□□□□□ -0.46
GTF3C3-206ENST00000448539 CMC2Q9NRP2 79 aa12.15□□□□□ -0.46
GTF3C3-206ENST00000448539 CA10Q9NS85 328 aa12.15□□□□□ -0.46
GTF3C3-206ENST00000448539 ENOPH1Q9UHY7 261 aa12.15□□□□□ -0.46
GTF3C3-206ENST00000448539 OAZ3Q9UMX2 235 aa12.15□□□□□ -0.46
GTF3C3-206ENST00000448539 POLQO75417 2590 aa12.15□□□□□ -0.47
GTF3C3-206ENST00000448539 TEP1Q99973 2627 aaKnown RBP12.14□□□□□ -0.47
GTF3C3-206ENST00000448539 H3BNX3 289 aa12.14□□□□□ -0.47
GTF3C3-206ENST00000448539 DCTN6O00399 190 aa12.14□□□□□ -0.47
GTF3C3-206ENST00000448539 SOD3P08294 240 aa12.14□□□□□ -0.47
GTF3C3-206ENST00000448539 BMP4P12644 408 aa12.14□□□□□ -0.47
GTF3C3-206ENST00000448539 ZNF35P13682 527 aa12.14□□□□□ -0.47
GTF3C3-206ENST00000448539 ZNF823P16415 610 aa12.14□□□□□ -0.47
GTF3C3-206ENST00000448539 CCNOP22674 350 aa12.14□□□□□ -0.47
GTF3C3-206ENST00000448539 NR4A1P22736 598 aa12.14□□□□□ -0.47
GTF3C3-206ENST00000448539 STOMP27105 288 aa12.14□□□□□ -0.47
GTF3C3-206ENST00000448539 APEX1P27695 318 aaKnown RBP12.14□□□□□ -0.47
GTF3C3-206ENST00000448539 GDI2P50395 445 aaKnown RBP12.14□□□□□ -0.47
GTF3C3-206ENST00000448539 CRISP1P54107 249 aa12.14□□□□□ -0.47
GTF3C3-206ENST00000448539 RPS23P62266 143 aaKnown RBP12.14□□□□□ -0.47
GTF3C3-206ENST00000448539 ESRRGP62508 458 aa12.14□□□□□ -0.47
GTF3C3-206ENST00000448539 SNTB2Q13425 540 aaKnown RBP12.14□□□□□ -0.47
GTF3C3-206ENST00000448539 AQP6Q13520 282 aa12.14□□□□□ -0.47
GTF3C3-206ENST00000448539 CRMP1Q14194 572 aa12.14□□□□□ -0.47
GTF3C3-206ENST00000448539 KCNMB1Q16558 191 aa12.14□□□□□ -0.47
GTF3C3-206ENST00000448539 ZNF584Q8IVC4 421 aa12.14□□□□□ -0.47
GTF3C3-206ENST00000448539 OR9Q1Q8NGQ5 310 aa12.14□□□□□ -0.47
GTF3C3-206ENST00000448539 FOXC2Q99958 501 aa12.14□□□□□ -0.47
GTF3C3-206ENST00000448539 OSBPL10Q9BXB5 764 aa12.14□□□□□ -0.47
GTF3C3-206ENST00000448539 PRRG3Q9BZD7 231 aa12.14□□□□□ -0.47
GTF3C3-206ENST00000448539 S100A14Q9HCY8 104 aa12.14□□□□□ -0.47
GTF3C3-206ENST00000448539 CBLN4Q9NTU7 201 aa12.14□□□□□ -0.47
GTF3C3-206ENST00000448539 ASH2LQ9UBL3 628 aa12.14□□□□□ -0.47
GTF3C3-206ENST00000448539 CADP27708 2225 aa12.13□□□□□ -0.47
GTF3C3-206ENST00000448539 SGCEO43556 437 aa12.13□□□□□ -0.47
GTF3C3-206ENST00000448539 DOK2O60496 412 aa12.13□□□□□ -0.47
GTF3C3-206ENST00000448539 GPANK1O95872 356 aa12.13□□□□□ -0.47
GTF3C3-206ENST00000448539 DANCRP0C864 163 aa12.13□□□□□ -0.47
GTF3C3-206ENST00000448539 CCL2P13500 99 aa12.13□□□□□ -0.47
GTF3C3-206ENST00000448539 IGFBP5P24593 272 aa12.13□□□□□ -0.47
GTF3C3-206ENST00000448539 PYCR1P32322 319 aa12.13□□□□□ -0.47
GTF3C3-206ENST00000448539 SERPINF1P36955 418 aa12.13□□□□□ -0.47
GTF3C3-206ENST00000448539 SLC25A1P53007 311 aa12.13□□□□□ -0.47
GTF3C3-206ENST00000448539 CDK5Q00535 292 aa12.13□□□□□ -0.47
GTF3C3-206ENST00000448539 TEKQ02763 1124 aa12.13□□□□□ -0.47
GTF3C3-206ENST00000448539 HGFACQ04756 655 aa12.13□□□□□ -0.47
GTF3C3-206ENST00000448539 ZNF362Q5T0B9 420 aaPredicted RBP12.13□□□□□ -0.47
GTF3C3-206ENST00000448539 ACSM5Q6NUN0 579 aa12.13□□□□□ -0.47
GTF3C3-206ENST00000448539 ZNF774Q6NX45 483 aa12.13□□□□□ -0.47
GTF3C3-206ENST00000448539 UNQ6126/PRO20091Q6UXV3 157 aa12.13□□□□□ -0.47
GTF3C3-206ENST00000448539 DTX2Q86UW9 622 aa12.13□□□□□ -0.47
GTF3C3-206ENST00000448539 SLC26A10Q8NG04 563 aa12.13□□□□□ -0.47
GTF3C3-206ENST00000448539 OR2AJ1Q8NGZ0 328 aa12.13□□□□□ -0.47
GTF3C3-206ENST00000448539 TRMT61AQ96FX7 289 aaKnown RBP12.13□□□□□ -0.47
GTF3C3-206ENST00000448539 DDOQ99489 341 aa12.13□□□□□ -0.47
GTF3C3-206ENST00000448539 RBM4BQ9BQ04 359 aaKnown RBP12.13□□□□□ -0.47
GTF3C3-206ENST00000448539 TRAF4Q9BUZ4 470 aaPredicted RBP12.13□□□□□ -0.47
GTF3C3-206ENST00000448539 RBM4Q9BWF3 364 aaKnown RBP12.13□□□□□ -0.47
GTF3C3-206ENST00000448539 WNT5BQ9H1J7 359 aa12.13□□□□□ -0.47
GTF3C3-206ENST00000448539 ZNF442Q9H7R0 627 aa12.13□□□□□ -0.47
GTF3C3-206ENST00000448539 SLC25A19Q9HC21 320 aa12.13□□□□□ -0.47
GTF3C3-206ENST00000448539 PLEK2Q9NYT0 353 aa12.13□□□□□ -0.47
GTF3C3-206ENST00000448539 EIF3KQ9UBQ5 218 aaKnown RBP12.13□□□□□ -0.47
GTF3C3-206ENST00000448539 NDRG4Q9ULP0 352 aaKnown RBP12.13□□□□□ -0.47
GTF3C3-206ENST00000448539 ORC6Q9Y5N6 252 aa12.13□□□□□ -0.47
GTF3C3-206ENST00000448539 SPG11Q96JI7 2443 aa12.13□□□□□ -0.47
GTF3C3-206ENST00000448539 AKAP6Q13023 2319 aa12.12□□□□□ -0.47
GTF3C3-206ENST00000448539 C5orf49A4QMS7 147 aa12.12□□□□□ -0.47
GTF3C3-206ENST00000448539 PRR23D1E9PI22 279 aaPredicted RBP12.12□□□□□ -0.47
GTF3C3-206ENST00000448539 SURF4O15260 269 aa12.12□□□□□ -0.47
GTF3C3-206ENST00000448539 MITFO75030 526 aaPredicted RBP12.12□□□□□ -0.47
GTF3C3-206ENST00000448539 BAG2O95816 211 aa12.12□□□□□ -0.47
GTF3C3-206ENST00000448539 PRR23D2P0DMB1 279 aaPredicted RBP12.12□□□□□ -0.47
GTF3C3-206ENST00000448539 GAAP10253 952 aa12.12□□□□□ -0.47
GTF3C3-206ENST00000448539 SPI1P17947 270 aa12.12□□□□□ -0.47
GTF3C3-206ENST00000448539 FMO3P31513 532 aa12.12□□□□□ -0.47
GTF3C3-206ENST00000448539 THBS4P35443 961 aa12.12□□□□□ -0.47
GTF3C3-206ENST00000448539 RAD52P43351 418 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms