RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 PTCHD4Q6ZW05 846 aa11.93□□□□□ -0.5
PDLIM2-213ENST00000448520 LNX2Q8N448 690 aa11.93□□□□□ -0.5
PDLIM2-213ENST00000448520 ZNF540Q8NDQ6 660 aa11.93□□□□□ -0.5
PDLIM2-213ENST00000448520 OR4K13Q8NH42 304 aa11.93□□□□□ -0.5
PDLIM2-213ENST00000448520 ZNF519Q8TB69 540 aa11.93□□□□□ -0.5
PDLIM2-213ENST00000448520 CYGBQ8WWM9 190 aa11.93□□□□□ -0.5
PDLIM2-213ENST00000448520 UBE2FQ969M7 185 aa11.93□□□□□ -0.5
PDLIM2-213ENST00000448520 FBXO17Q96EF6 278 aa11.93□□□□□ -0.5
PDLIM2-213ENST00000448520 OR2M2Q96R28 347 aa11.93□□□□□ -0.5
PDLIM2-213ENST00000448520 TXNIPQ9H3M7 391 aa11.93□□□□□ -0.5
PDLIM2-213ENST00000448520 SLC25A19Q9HC21 320 aa11.93□□□□□ -0.5
PDLIM2-213ENST00000448520 MYOZ1Q9NP98 299 aaPredicted RBP11.93□□□□□ -0.5
PDLIM2-213ENST00000448520 FAM118AQ9NWS6 357 aa11.93□□□□□ -0.5
PDLIM2-213ENST00000448520 AASSQ9UDR5 926 aa11.93□□□□□ -0.5
PDLIM2-213ENST00000448520 MOKQ9UQ07 419 aa11.93□□□□□ -0.5
PDLIM2-213ENST00000448520 LOC390937A0A1W2PQ73 354 aa11.92□□□□□ -0.5
PDLIM2-213ENST00000448520 VWC2LB2RUY7 222 aa11.92□□□□□ -0.5
PDLIM2-213ENST00000448520 B9A039 149 aa11.92□□□□□ -0.5
PDLIM2-213ENST00000448520 E9PQ18 207 aa11.92□□□□□ -0.5
PDLIM2-213ENST00000448520 ATP6V1G2-DDX39BF2Z307 99 aa11.92□□□□□ -0.5
PDLIM2-213ENST00000448520 CRYAAP02489 173 aa11.92□□□□□ -0.5
PDLIM2-213ENST00000448520 HIST1H1CP16403 213 aaKnown RBP11.92□□□□□ -0.5
PDLIM2-213ENST00000448520 CDH2P19022 906 aaPredicted RBP11.92□□□□□ -0.5
PDLIM2-213ENST00000448520 GRK5P34947 590 aa11.92□□□□□ -0.5
PDLIM2-213ENST00000448520 SERPINF1P36955 418 aa11.92□□□□□ -0.5
PDLIM2-213ENST00000448520 CDKN2AP42771 156 aaKnown RBP11.92□□□□□ -0.5
PDLIM2-213ENST00000448520 UBE2NP61088 152 aaKnown RBP11.92□□□□□ -0.5
PDLIM2-213ENST00000448520 SNRPD2P62316 118 aaKnown RBP11.92□□□□□ -0.5
PDLIM2-213ENST00000448520 MYBPC1Q00872 1141 aa11.92□□□□□ -0.5
PDLIM2-213ENST00000448520 ZNF362Q5T0B9 420 aaPredicted RBP11.92□□□□□ -0.5
PDLIM2-213ENST00000448520 C12orf73Q69YU5 71 aa11.92□□□□□ -0.5
PDLIM2-213ENST00000448520 SLC27A4Q6P1M0 643 aa11.92□□□□□ -0.5
PDLIM2-213ENST00000448520 TMEM123Q8N131 208 aa11.92□□□□□ -0.5
PDLIM2-213ENST00000448520 FAM169BQ8N8A8 192 aa11.92□□□□□ -0.5
PDLIM2-213ENST00000448520 SYT14Q8NB59 555 aa11.92□□□□□ -0.5
PDLIM2-213ENST00000448520 CYB561A3Q8NBI2 242 aa11.92□□□□□ -0.5
PDLIM2-213ENST00000448520 SDR9C7Q8NEX9 313 aa11.92□□□□□ -0.5
PDLIM2-213ENST00000448520 OR2T33Q8NG76 320 aa11.92□□□□□ -0.5
PDLIM2-213ENST00000448520 OR52E2Q8NGJ4 325 aa11.92□□□□□ -0.5
PDLIM2-213ENST00000448520 SLC38A2Q96QD8 506 aa11.92□□□□□ -0.5
PDLIM2-213ENST00000448520 PIMREGQ9BSJ6 248 aa11.92□□□□□ -0.5
PDLIM2-213ENST00000448520 C8orf4Q9NR00 106 aa11.92□□□□□ -0.5
PDLIM2-213ENST00000448520 TVP23BQ9NYZ1 205 aa11.92□□□□□ -0.5
PDLIM2-213ENST00000448520 GRHPRQ9UBQ7 328 aa11.92□□□□□ -0.5
PDLIM2-213ENST00000448520 KCNS2Q9ULS6 477 aa11.92□□□□□ -0.5
PDLIM2-213ENST00000448520 ZNF587BE7ETH6 402 aa11.91□□□□□ -0.5
PDLIM2-213ENST00000448520 ARPC3O15145 178 aa11.91□□□□□ -0.5
PDLIM2-213ENST00000448520 PRKYO43930 277 aa11.91□□□□□ -0.5
PDLIM2-213ENST00000448520 UPK3AO75631 287 aa11.91□□□□□ -0.5
PDLIM2-213ENST00000448520 TRMUO75648 421 aaKnown RBP11.91□□□□□ -0.5
PDLIM2-213ENST00000448520 ZNF432O94892 652 aa11.91□□□□□ -0.5
PDLIM2-213ENST00000448520 ACADSP16219 412 aa11.91□□□□□ -0.5
PDLIM2-213ENST00000448520 NOS3P29474 1203 aa11.91□□□□□ -0.5
PDLIM2-213ENST00000448520 SDHAP31040 664 aa11.91□□□□□ -0.5
PDLIM2-213ENST00000448520 NR4A2P43354 598 aa11.91□□□□□ -0.5
PDLIM2-213ENST00000448520 DAP3P51398 398 aaKnown RBP11.91□□□□□ -0.5
PDLIM2-213ENST00000448520 RPS6KA3P51812 740 aa11.91□□□□□ -0.5
PDLIM2-213ENST00000448520 ADARB1P78563 741 aaKnown RBP11.91□□□□□ -0.5
PDLIM2-213ENST00000448520 FMODQ06828 376 aa11.91□□□□□ -0.5
PDLIM2-213ENST00000448520 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.91□□□□□ -0.5
PDLIM2-213ENST00000448520 FAM166AQ6J272 317 aa11.91□□□□□ -0.5
PDLIM2-213ENST00000448520 ANKRD16Q6P6B7 361 aa11.91□□□□□ -0.5
PDLIM2-213ENST00000448520 LINGO2Q7L985 606 aa11.91□□□□□ -0.5
PDLIM2-213ENST00000448520 DHRSXQ8N5I4 330 aa11.91□□□□□ -0.5
PDLIM2-213ENST00000448520 ARIH2OSQ8N7S6 290 aa11.91□□□□□ -0.5
PDLIM2-213ENST00000448520 OR4F15Q8NGB8 312 aa11.91□□□□□ -0.5
PDLIM2-213ENST00000448520 OR1K1Q8NGR3 316 aa11.91□□□□□ -0.5
PDLIM2-213ENST00000448520 NMNAT3Q96T66 252 aa11.91□□□□□ -0.5
PDLIM2-213ENST00000448520 PITX2Q99697 317 aa11.91□□□□□ -0.5
PDLIM2-213ENST00000448520 ADI1Q9BV57 179 aa11.91□□□□□ -0.5
PDLIM2-213ENST00000448520 NDEL1Q9GZM8 345 aa11.91□□□□□ -0.5
PDLIM2-213ENST00000448520 VCXQ9H320 206 aa11.91□□□□□ -0.5
PDLIM2-213ENST00000448520 VCX3BQ9H321 246 aa11.91□□□□□ -0.5
PDLIM2-213ENST00000448520 MED20Q9H944 212 aa11.91□□□□□ -0.5
PDLIM2-213ENST00000448520 ARPC4-TTLL3A0A0A6YYG9 625 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 IGKV1D-43A0A0B4J1Z2 117 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 IGHV1-18A0A0C4DH31 117 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 LOC100130705A0A1B0GUX0 176 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 FAM183AA6NL82 134 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 ZNF726A6NNF4 738 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 M0R3G1 203 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 SURF4O15260 269 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 TXNDC12O95881 172 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 GNAO1P09471 354 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 PGA4P0DJD7 388 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 PGA3P0DJD8 388 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 SRD5A1P18405 259 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 GGT2P36268 569 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 SH3BGRP55822 239 aaPredicted RBP11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 CRMP1Q14194 572 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 TAF11Q15544 211 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 TBRG1Q3YBR2 411 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 HIKESHIQ53FT3 197 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 GPR139Q6DWJ6 353 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 LEG1Q6P5S2 330 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 BCDIN3DQ7Z5W3 292 aaKnown RBP11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 SLC37A3Q8NCC5 494 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 NOXO1Q8NFA2 376 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 OR9Q1Q8NGQ5 310 aa11.9□□□□□ -0.5
PDLIM2-213ENST00000448520 OR6X1Q8NH79 312 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms