RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 CLEC6AQ6EIG7 209 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 DUX4L9Q6RFH8 374 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 PRSS41Q7RTY9 318 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 OR4D6Q8NGJ1 314 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 OR2L2Q8NH16 312 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 CCDC12Q8WUD4 166 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 FGF14Q92915 247 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 MRGPRFQ96AM1 343 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 SLC25A38Q96DW6 304 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 OR5M11Q96RB7 305 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 HIST1H4GQ99525 98 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 NAT9Q9BTE0 207 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 BBS2Q9BXC9 721 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 MAP1LC3CQ9BXW4 147 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 NXF3Q9H4D5 531 aaKnown RBP3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 KIR3DX1Q9H7L2 352 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 RPS10P5Q9NQ39 176 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 TREM2Q9NZC2 230 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 STX18Q9P2W9 335 aaKnown RBP3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 DUX4Q9UBX2 424 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 DCDC2Q9UHG0 476 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 GNPTGQ9UJJ9 305 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 NWD1Q149M9 1564 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 DEPDC5O75140 1603 aa3.37□□□□□ -1.87
HMGB1P48-201ENST00000446155 MROH2AA6NES4 1674 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 NLRP1Q9C000 1473 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 IGHV3OR16-13A0A075B7E8 117 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 A0A1W2PRF3 423 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 A0A1W2PRM7 423 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 TSPAN11A1L157 253 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 A6NIZ1 184 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 LYRM9A8MSI8 78 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 DUSP14O95147 198 aaKnown RBP3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 VAPBO95292 243 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 PRPS2P11908 318 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 PGAM2P15259 253 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 ZNF250P15622 560 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 CMA1P23946 247 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 RFC3P40938 356 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 UGT2B15P54855 530 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 RAP1BP61224 184 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 STXBP1P61764 594 aaKnown RBP3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 SP4Q02446 784 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 ACVR1Q04771 509 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 LRRC63Q05C16 580 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 CD47Q08722 323 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 PDIA2Q13087 525 aaKnown RBP3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 ART3Q13508 389 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 PSG3Q16557 428 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 LRRC36Q1X8D7 754 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 OR2B11Q5JQS5 317 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 TPRG1LQ5T0D9 272 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 CCDC122Q5T0U0 273 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 SPECC1LQ69YQ0 1117 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 ADNP2Q6IQ32 1131 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 PRMT9Q6P2P2 845 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 C6orf89Q6UWU4 347 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 TFAP2EQ6VUC0 442 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 LINC00336Q6ZUF6 198 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 OR2W3Q7Z3T1 314 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 TMEM135Q86UB9 458 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 LRRC8AQ8IWT6 810 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 C6orf223Q8N319 242 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 CADM2Q8N3J6 435 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 CCDC71LQ8N9Z2 235 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 HSD17B11Q8NBQ5 300 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 OR10H4Q8NGA5 316 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 OR10G3Q8NGC4 313 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 FGGYQ96C11 551 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 MED8Q96G25 268 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 RNF170Q96K19 258 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 ZNF317Q96PQ6 595 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 RANBP9Q96S59 729 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 NAPGQ99747 312 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 HES7Q9BYE0 225 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 NAA50Q9GZZ1 169 aaKnown RBP3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 C20orf85Q9H1P6 137 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 TMEM38AQ9H6F2 299 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 ISG20L2Q9H9L3 353 aaKnown RBP3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 PATZ1Q9HBE1 687 aaKnown RBP3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 EML4Q9HC35 981 aaKnown RBP3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 CD209Q9NNX6 404 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 EXD2Q9NVH0 621 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 CLN6Q9NWW5 311 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 STMN3Q9NZ72 180 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 KLHL21Q9UJP4 597 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 GGA2Q9UJY4 613 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 COL16A1Q07092 1604 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 ABCA6Q8N139 1617 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 PHF3Q92576 2039 aaKnown RBP3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 RTEL1-TNFRSF6BF6WH68 1400 aa3.36□□□□□ -1.87
HMGB1P48-201ENST00000446155 ATP7AQ04656 1500 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 UGGT1Q9NYU2 1555 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 IGHV7-81A0A0B4J1V7 117 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 KIR2DL5BA0A0G2JN68 375 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 KIR2DL5BA0A0G2JPC4 375 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 ZNF816-ZNF321PA0A0X1KG74 233 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 ERVV-1B6SEH8 477 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 E7EWF7 191 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms