RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 IGKV1D-16P01601 117 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 FREM3P0C091 2139 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 CMPK1P30085 196 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 LSSP48449 732 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 CENPAP49450 140 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 SRSF4Q08170 494 aaKnown RBP12.6□□□□□ -0.39
VPS52-212ENST00000445902 ULK3Q6PHR2 472 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 SLC30A7Q8NEW0 376 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 GAL3ST3Q96A11 431 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 NECAB3Q96P71 396 aaPredicted RBP12.6□□□□□ -0.39
VPS52-212ENST00000445902 RNF186Q9NXI6 227 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 KCNG2Q9UJ96 466 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 SLC27A6Q9Y2P4 619 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 PMS2P1A4D2B8 440 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 PRKNO60260 465 aaPredicted RBP12.6□□□□□ -0.39
VPS52-212ENST00000445902 TMEM127O75204 238 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 CRHP06850 196 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 SNRNP70P08621 437 aaKnown RBP12.6□□□□□ -0.39
VPS52-212ENST00000445902 P2RY2P41231 377 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 MAP3K8P41279 467 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 LPAR6P43657 344 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 CTXN1P60606 82 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 DMWDQ09019 674 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 PMPCAQ10713 525 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 DGAT2L6Q6ZPD8 337 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 OR51A2Q8NGJ7 313 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 MCHR2Q969V1 340 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 INTS12Q96CB8 462 aaKnown RBP12.6□□□□□ -0.39
VPS52-212ENST00000445902 SLC41A2Q96JW4 573 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 ARL5BQ96KC2 179 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 ELF4Q99607 663 aaPredicted RBP12.6□□□□□ -0.39
VPS52-212ENST00000445902 KXD1Q9BQD3 176 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 LPAR3Q9UBY5 353 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 DAPP1Q9UN19 280 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 MRPS33Q9Y291 106 aaKnown RBP12.6□□□□□ -0.39
VPS52-212ENST00000445902 YBX2Q9Y2T7 364 aaKnown RBP12.6□□□□□ -0.39
VPS52-212ENST00000445902 F8VVB4 439 aa12.59□□□□□ -0.39
VPS52-212ENST00000445902 F8VWA3 439 aa12.59□□□□□ -0.39
VPS52-212ENST00000445902 H0YIZ8 118 aa12.59□□□□□ -0.39
VPS52-212ENST00000445902 MED6O75586 246 aa12.59□□□□□ -0.39
VPS52-212ENST00000445902 MELTFP08582 738 aa12.59□□□□□ -0.39
VPS52-212ENST00000445902 TLX1P31314 330 aaPredicted RBP12.59□□□□□ -0.39
VPS52-212ENST00000445902 RNASE10Q5GAN6 216 aaKnown RBP12.59□□□□□ -0.39
VPS52-212ENST00000445902 NCMAPQ5T1S8 102 aa12.59□□□□□ -0.39
VPS52-212ENST00000445902 FCRL6Q6DN72 434 aa12.59□□□□□ -0.39
VPS52-212ENST00000445902 JAGN1Q8N5M9 183 aa12.59□□□□□ -0.39
VPS52-212ENST00000445902 SUSD6Q92537 303 aa12.59□□□□□ -0.39
VPS52-212ENST00000445902 MOGAT1Q96PD6 335 aa12.59□□□□□ -0.39
VPS52-212ENST00000445902 EDEM2Q9BV94 578 aa12.59□□□□□ -0.39
VPS52-212ENST00000445902 SEBOXQ9HB31 216 aaPredicted RBP12.59□□□□□ -0.39
VPS52-212ENST00000445902 TAS2R4Q9NYW5 299 aa12.59□□□□□ -0.39
VPS52-212ENST00000445902 MRPS18BQ9Y676 258 aaKnown RBP12.59□□□□□ -0.39
VPS52-212ENST00000445902 KNL1Q8NG31 2342 aa12.59□□□□□ -0.39
VPS52-212ENST00000445902 A0A1W2PPH5 198 aa12.59□□□□□ -0.39
VPS52-212ENST00000445902 TMEM212A6NML5 194 aa12.59□□□□□ -0.39
VPS52-212ENST00000445902 GMFGO60234 142 aa12.59□□□□□ -0.39
VPS52-212ENST00000445902 PLGP00747 810 aaPredicted RBP12.59□□□□□ -0.39
VPS52-212ENST00000445902 CD14P08571 375 aa12.59□□□□□ -0.39
VPS52-212ENST00000445902 RCC1P18754 421 aaPredicted RBP12.59□□□□□ -0.39
VPS52-212ENST00000445902 SPOCK1Q08629 439 aa12.59□□□□□ -0.39
VPS52-212ENST00000445902 FAM76BQ5HYJ3 339 aa12.59□□□□□ -0.39
VPS52-212ENST00000445902 ADAMTSL4Q6UY14 1074 aa12.59□□□□□ -0.39
VPS52-212ENST00000445902 SLC25A42Q86VD7 318 aa12.59□□□□□ -0.39
VPS52-212ENST00000445902 CDC20BQ86Y33 519 aa12.59□□□□□ -0.39
VPS52-212ENST00000445902 OR52R1Q8NGF1 315 aa12.59□□□□□ -0.39
VPS52-212ENST00000445902 MITD1Q8WV92 249 aa12.59□□□□□ -0.39
VPS52-212ENST00000445902 NUDCD2Q8WVJ2 157 aa12.59□□□□□ -0.39
VPS52-212ENST00000445902 LRFN5Q96NI6 719 aa12.59□□□□□ -0.39
VPS52-212ENST00000445902 GAS2L1Q99501 681 aaPredicted RBP12.59□□□□□ -0.39
VPS52-212ENST00000445902 SULT4A1Q9BR01 284 aa12.59□□□□□ -0.39
VPS52-212ENST00000445902 RNF126Q9BV68 326 aa12.59□□□□□ -0.39
VPS52-212ENST00000445902 SEC61A2Q9H9S3 476 aa12.59□□□□□ -0.39
VPS52-212ENST00000445902 RNF122Q9H9V4 155 aa12.59□□□□□ -0.39
VPS52-212ENST00000445902 TEX13DA0A0J9YY54 714 aaPredicted RBP12.58□□□□□ -0.4
VPS52-212ENST00000445902 B3GALT2O43825 422 aa12.58□□□□□ -0.4
VPS52-212ENST00000445902 LRP3O75074 770 aa12.58□□□□□ -0.4
VPS52-212ENST00000445902 STK17BO94768 372 aa12.58□□□□□ -0.4
VPS52-212ENST00000445902 HLA-DQA2P01906 255 aa12.58□□□□□ -0.4
VPS52-212ENST00000445902 HTR2CP28335 458 aa12.58□□□□□ -0.4
VPS52-212ENST00000445902 DHCR24Q15392 516 aa12.58□□□□□ -0.4
VPS52-212ENST00000445902 KLHL26Q53HC5 615 aa12.58□□□□□ -0.4
VPS52-212ENST00000445902 DHRS11Q6UWP2 260 aa12.58□□□□□ -0.4
VPS52-212ENST00000445902 IL34Q6ZMJ4 242 aa12.58□□□□□ -0.4
VPS52-212ENST00000445902 RTN4RL2Q86UN3 420 aa12.58□□□□□ -0.4
VPS52-212ENST00000445902 FOXRED2Q8IWF2 684 aa12.58□□□□□ -0.4
VPS52-212ENST00000445902 KREMEN2Q8NCW0 462 aa12.58□□□□□ -0.4
VPS52-212ENST00000445902 SECTM1Q8WVN6 248 aa12.58□□□□□ -0.4
VPS52-212ENST00000445902 C4orf45Q96LM5 186 aa12.58□□□□□ -0.4
VPS52-212ENST00000445902 TBC1D3DA0A087WVF3 549 aa12.58□□□□□ -0.4
VPS52-212ENST00000445902 TBC1D3IA0A087WXS9 549 aa12.58□□□□□ -0.4
VPS52-212ENST00000445902 TBC1D3LB9A6J9 549 aa12.58□□□□□ -0.4
VPS52-212ENST00000445902 ARPC3O15145 178 aa12.58□□□□□ -0.4
VPS52-212ENST00000445902 ADAP1O75689 374 aa12.58□□□□□ -0.4
VPS52-212ENST00000445902 SLC35G6P0C7Q6 338 aa12.58□□□□□ -0.4
VPS52-212ENST00000445902 TBC1D3HP0C7X1 549 aa12.58□□□□□ -0.4
VPS52-212ENST00000445902 CAV2P51636 162 aa12.58□□□□□ -0.4
VPS52-212ENST00000445902 TBC1D3CQ6IPX1 549 aa12.58□□□□□ -0.4
VPS52-212ENST00000445902 TMEM151BQ8IW70 566 aa12.58□□□□□ -0.4
VPS52-212ENST00000445902 TBC1D3Q8IZP1 549 aaPredicted RBP12.58□□□□□ -0.4
VPS52-212ENST00000445902 CHST4Q8NCG5 386 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms