RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 ITGA5P08648 1049 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 ALOX5APP20292 161 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 ITGA3P26006 1051 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 YPEL5P62699 121 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 TLE3Q04726 772 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 MANEAQ5SRI9 462 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 C9orf50Q5SZB4 431 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 OR52W1Q6IF63 320 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 SPICQ8N5J4 248 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 ZNF784Q8NCA9 323 aaPredicted RBP10.74□□□□□ -0.69
MSH6-204ENST00000445503 PHB2Q99623 299 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 SHPKQ9UHJ6 478 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 TMED7Q9Y3B3 224 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 FAM186AA6NE01 2351 aa10.74□□□□□ -0.69
MSH6-204ENST00000445503 ALPK3Q96L96 1907 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 F8W036 122 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 SCGB1D2O95969 90 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 LINC00271P0C7V0 271 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 AVPR2P30518 371 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 BLOC1S1P78537 153 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 ZNF141Q15928 474 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 TMEM88Q6PEY1 159 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 TMEM92Q6UXU6 159 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 PEG10Q86TG7 708 aaKnown RBP10.73□□□□□ -0.69
MSH6-204ENST00000445503 ZNF615Q8N8J6 731 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 DAZLQ92904 295 aaKnown RBP10.73□□□□□ -0.69
MSH6-204ENST00000445503 LRFN5Q96NI6 719 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 CRISPLD2Q9H0B8 497 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 TRAV36DV7A0A075B6V5 113 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 RPS10-NUDT3A0A1W2PQS6 291 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 ZNF878C9JN71 531 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 TNFSF14O43557 240 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 PMP2P02689 132 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 PI3P19957 117 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 FCARP24071 287 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 C1orf53Q5VUE5 145 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 ANKRD16Q6P6B7 361 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 SEZ6L2Q6UXD5 910 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 TSTD1Q8NFU3 115 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 OR51A2Q8NGJ7 313 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 CD207Q9UJ71 328 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 A0A1W2PQF6 199 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 MEGF11A6BM72 1044 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 KCNAB3O43448 404 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 NMBP08949 121 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 GABRA1P14867 456 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 H2BFSP57053 126 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 PMPCAQ10713 525 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 IL10RAQ13651 578 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 C16orf47Q6ZP98 133 aaPredicted RBP10.73□□□□□ -0.69
MSH6-204ENST00000445503 CDH26Q8IXH8 852 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 ZNF679Q8IYX0 411 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 SPAG16Q8N0X2 631 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 OR5D18Q8NGL1 313 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 OR1J4Q8NGS1 313 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 ABHD6Q9BV23 337 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 ST6GALNAC5Q9BVH7 336 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 CUTCQ9NTM9 273 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 HRH3Q9Y5N1 445 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 LOC107986453A0A1B0GWG9 222 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 PMS2P2O95744 297 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 FBLP22087 321 aaKnown RBP10.73□□□□□ -0.69
MSH6-204ENST00000445503 SLC6A8P48029 635 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 RPL27P61353 136 aaKnown RBP10.73□□□□□ -0.69
MSH6-204ENST00000445503 ELOCQ15369 112 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 GALNT16Q8N428 558 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 FBXW5Q969U6 566 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 TCTN2Q96GX1 697 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 ZNF75AQ96N20 296 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 PELOQ9BRX2 385 aaKnown RBP10.73□□□□□ -0.69
MSH6-204ENST00000445503 EVA1AQ9H8M9 152 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 MED29Q9NX70 200 aa10.73□□□□□ -0.69
MSH6-204ENST00000445503 TMEM272A0A1B0GTI8 110 aa10.72□□□□□ -0.69
MSH6-204ENST00000445503 PLSCR5A0PG75 271 aa10.72□□□□□ -0.69
MSH6-204ENST00000445503 CDK2AP1O14519 115 aa10.72□□□□□ -0.69
MSH6-204ENST00000445503 ALOX12BO75342 701 aa10.72□□□□□ -0.69
MSH6-204ENST00000445503 KNG1P01042 644 aa10.72□□□□□ -0.69
MSH6-204ENST00000445503 ZP3P21754 424 aa10.72□□□□□ -0.69
MSH6-204ENST00000445503 CRABP1P29762 137 aa10.72□□□□□ -0.69
MSH6-204ENST00000445503 FOXL2P58012 376 aa10.72□□□□□ -0.69
MSH6-204ENST00000445503 FMODQ06828 376 aa10.72□□□□□ -0.69
MSH6-204ENST00000445503 PAPD4Q6PIY7 484 aaKnown RBP10.72□□□□□ -0.69
MSH6-204ENST00000445503 ZNF283Q8N7M2 679 aa10.72□□□□□ -0.69
MSH6-204ENST00000445503 OTOSQ8NHW6 89 aa10.72□□□□□ -0.69
MSH6-204ENST00000445503 GFI1Q99684 422 aa10.72□□□□□ -0.69
MSH6-204ENST00000445503 GPR160Q9UJ42 338 aa10.72□□□□□ -0.69
MSH6-204ENST00000445503 ICAM5Q9UMF0 924 aa10.72□□□□□ -0.69
MSH6-204ENST00000445503 H3BUI4 141 aa10.72□□□□□ -0.69
MSH6-204ENST00000445503 SLC17A2O00624 439 aa10.72□□□□□ -0.69
MSH6-204ENST00000445503 MFSD13AQ14CX5 517 aa10.72□□□□□ -0.69
MSH6-204ENST00000445503 STPG1Q5TH74 334 aa10.72□□□□□ -0.69
MSH6-204ENST00000445503 TMEM225Q6GV28 225 aa10.72□□□□□ -0.69
MSH6-204ENST00000445503 FAM219AQ8IW50 185 aa10.72□□□□□ -0.69
MSH6-204ENST00000445503 ASB17Q8WXJ9 295 aa10.72□□□□□ -0.69
MSH6-204ENST00000445503 OR8B4Q96RC9 309 aa10.72□□□□□ -0.69
MSH6-204ENST00000445503 SLC19A3Q9BZV2 496 aa10.72□□□□□ -0.69
MSH6-204ENST00000445503 TMEM231Q9H6L2 316 aa10.72□□□□□ -0.69
MSH6-204ENST00000445503 OR52A1Q9UKL2 312 aa10.72□□□□□ -0.69
MSH6-204ENST00000445503 HIF3AQ9Y2N7 669 aa10.72□□□□□ -0.69
MSH6-204ENST00000445503 RP1P56715 2156 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms