RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 ALOX5APP20292 161 aa13.22□□□□□ -0.29
CCNE1-203ENST00000444983 DCKP27707 260 aa13.22□□□□□ -0.29
CCNE1-203ENST00000444983 C21orf33P30042 268 aaPredicted RBP13.22□□□□□ -0.29
CCNE1-203ENST00000444983 CD79BP40259 229 aa13.22□□□□□ -0.29
CCNE1-203ENST00000444983 NAA10P41227 235 aaPredicted RBP13.22□□□□□ -0.29
CCNE1-203ENST00000444983 HCCSP53701 268 aa13.22□□□□□ -0.29
CCNE1-203ENST00000444983 GABARAPL2P60520 117 aa13.22□□□□□ -0.29
CCNE1-203ENST00000444983 HIST1H3AP68431 136 aa13.22□□□□□ -0.29
CCNE1-203ENST00000444983 FAM27E3Q08E93 113 aa13.22□□□□□ -0.29
CCNE1-203ENST00000444983 TBRG1Q3YBR2 411 aa13.22□□□□□ -0.29
CCNE1-203ENST00000444983 KCTD21Q4G0X4 260 aa13.22□□□□□ -0.29
CCNE1-203ENST00000444983 HIKESHIQ53FT3 197 aa13.22□□□□□ -0.29
CCNE1-203ENST00000444983 HIST2H3PS2Q5TEC6 136 aa13.22□□□□□ -0.29
CCNE1-203ENST00000444983 SLC18B1Q6NT16 456 aa13.22□□□□□ -0.29
CCNE1-203ENST00000444983 AHSA2Q719I0 299 aa13.22□□□□□ -0.29
CCNE1-203ENST00000444983 HIST2H3AQ71DI3 136 aa13.22□□□□□ -0.29
CCNE1-203ENST00000444983 SHFQ7M4L6 423 aa13.22□□□□□ -0.29
CCNE1-203ENST00000444983 SYT9Q86SS6 491 aa13.22□□□□□ -0.29
CCNE1-203ENST00000444983 LRRC18Q8N456 261 aa13.22□□□□□ -0.29
CCNE1-203ENST00000444983 FGFBP3Q8TAT2 258 aa13.22□□□□□ -0.29
CCNE1-203ENST00000444983 ST7LQ8TDW4 575 aa13.22□□□□□ -0.29
CCNE1-203ENST00000444983 IPCEF1Q8WWN9 437 aaPredicted RBP13.22□□□□□ -0.29
CCNE1-203ENST00000444983 COPS4Q9BT78 406 aa13.22□□□□□ -0.29
CCNE1-203ENST00000444983 WACQ9BTA9 647 aa13.22□□□□□ -0.29
CCNE1-203ENST00000444983 HDHD5Q9BXW7 423 aa13.22□□□□□ -0.29
CCNE1-203ENST00000444983 GALNT8Q9NY28 637 aa13.22□□□□□ -0.29
CCNE1-203ENST00000444983 DIMT1Q9UNQ2 313 aaKnown RBP13.22□□□□□ -0.29
CCNE1-203ENST00000444983 PCDHGB1Q9Y5G3 927 aa13.22□□□□□ -0.29
CCNE1-203ENST00000444983 IRGMA1A4Y4 181 aa13.21□□□□□ -0.29
CCNE1-203ENST00000444983 ZG16O60844 167 aa13.21□□□□□ -0.29
CCNE1-203ENST00000444983 RAD51DO75771 328 aa13.21□□□□□ -0.29
CCNE1-203ENST00000444983 CDK1P06493 297 aa13.21□□□□□ -0.29
CCNE1-203ENST00000444983 OR2T7P0C7T2 308 aa13.21□□□□□ -0.29
CCNE1-203ENST00000444983 HOXB1P14653 301 aaPredicted RBP13.21□□□□□ -0.29
CCNE1-203ENST00000444983 CCKARP32238 428 aa13.21□□□□□ -0.29
CCNE1-203ENST00000444983 ASCL1P50553 236 aa13.21□□□□□ -0.29
CCNE1-203ENST00000444983 TFF3Q07654 80 aa13.21□□□□□ -0.29
CCNE1-203ENST00000444983 TSC22D1Q15714 1073 aa13.21□□□□□ -0.29
CCNE1-203ENST00000444983 XKRXQ6PP77 449 aa13.21□□□□□ -0.29
CCNE1-203ENST00000444983 C17orf78Q8N4C9 275 aa13.21□□□□□ -0.29
CCNE1-203ENST00000444983 OR6N2Q8NGY6 317 aa13.21□□□□□ -0.29
CCNE1-203ENST00000444983 OR2T27Q8NH04 317 aa13.21□□□□□ -0.29
CCNE1-203ENST00000444983 MAP6Q96JE9 813 aa13.21□□□□□ -0.29
CCNE1-203ENST00000444983 MNTQ99583 582 aa13.21□□□□□ -0.29
CCNE1-203ENST00000444983 B3GNT2Q9NY97 397 aa13.21□□□□□ -0.29
CCNE1-203ENST00000444983 ASH2LQ9UBL3 628 aa13.21□□□□□ -0.29
CCNE1-203ENST00000444983 BLOC1S6Q9UL45 172 aa13.21□□□□□ -0.29
CCNE1-203ENST00000444983 COPS3Q9UNS2 423 aa13.21□□□□□ -0.29
CCNE1-203ENST00000444983 KLHDC2Q9Y2U9 406 aa13.21□□□□□ -0.29
CCNE1-203ENST00000444983 ADGRG4Q8IZF6 3080 aa13.21□□□□□ -0.29
CCNE1-203ENST00000444983 DOPEY1Q5JWR5 2465 aa13.21□□□□□ -0.29
CCNE1-203ENST00000444983 CACNA1CQ13936 2221 aa13.21□□□□□ -0.3
CCNE1-203ENST00000444983 SPTBN1Q01082 2364 aaKnown RBP13.21□□□□□ -0.3
CCNE1-203ENST00000444983 ARPC4-TTLL3A0A0A6YYG9 625 aa13.21□□□□□ -0.3
CCNE1-203ENST00000444983 FARS2O95363 451 aaKnown RBP13.21□□□□□ -0.3
CCNE1-203ENST00000444983 LIMS3P0CW19 117 aa13.21□□□□□ -0.3
CCNE1-203ENST00000444983 LIMS4P0CW20 117 aa13.21□□□□□ -0.3
CCNE1-203ENST00000444983 UGT2B10P36537 528 aa13.21□□□□□ -0.3
CCNE1-203ENST00000444983 ATP6V1E1P36543 226 aa13.21□□□□□ -0.3
CCNE1-203ENST00000444983 AQP6Q13520 282 aa13.21□□□□□ -0.3
CCNE1-203ENST00000444983 RNLSQ5VYX0 342 aa13.21□□□□□ -0.3
CCNE1-203ENST00000444983 BHLHA15Q7RTS1 189 aaPredicted RBP13.21□□□□□ -0.3
CCNE1-203ENST00000444983 SLC35F2Q8IXU6 374 aa13.21□□□□□ -0.3
CCNE1-203ENST00000444983 CCDC36Q8IYA8 594 aa13.21□□□□□ -0.3
CCNE1-203ENST00000444983 ZNF808Q8N4W9 903 aaPredicted RBP13.21□□□□□ -0.3
CCNE1-203ENST00000444983 RFLNBQ8N5W9 214 aa13.21□□□□□ -0.3
CCNE1-203ENST00000444983 ZNF454Q8N9F8 522 aa13.21□□□□□ -0.3
CCNE1-203ENST00000444983 WDR31Q8NA23 367 aa13.21□□□□□ -0.3
CCNE1-203ENST00000444983 OR10H5Q8NGA6 315 aa13.21□□□□□ -0.3
CCNE1-203ENST00000444983 CA5BP1Q8WTZ4 195 aa13.21□□□□□ -0.3
CCNE1-203ENST00000444983 TMEM80Q96HE8 168 aa13.21□□□□□ -0.3
CCNE1-203ENST00000444983 ZNF75AQ96N20 296 aa13.21□□□□□ -0.3
CCNE1-203ENST00000444983 AMELYQ99218 206 aa13.21□□□□□ -0.3
CCNE1-203ENST00000444983 CDCA4Q9BXL8 241 aa13.21□□□□□ -0.3
CCNE1-203ENST00000444983 ZNF696Q9H7X3 374 aa13.21□□□□□ -0.3
CCNE1-203ENST00000444983 A0A1W2PQL4 384 aaPredicted RBP13.2□□□□□ -0.3
CCNE1-203ENST00000444983 CIB4A0PJX0 185 aa13.2□□□□□ -0.3
CCNE1-203ENST00000444983 OR5H1A6NKK0 313 aa13.2□□□□□ -0.3
CCNE1-203ENST00000444983 C12orf71A8MTZ7 269 aa13.2□□□□□ -0.3
CCNE1-203ENST00000444983 PRR32B1ATL7 298 aa13.2□□□□□ -0.3
CCNE1-203ENST00000444983 TNFAIP8O95379 198 aa13.2□□□□□ -0.3
CCNE1-203ENST00000444983 RAB36O95755 333 aa13.2□□□□□ -0.3
CCNE1-203ENST00000444983 SPARCP09486 303 aa13.2□□□□□ -0.3
CCNE1-203ENST00000444983 HCFC1P51610 2035 aa13.2□□□□□ -0.3
CCNE1-203ENST00000444983 ACTC1P68032 377 aa13.2□□□□□ -0.3
CCNE1-203ENST00000444983 ACTA1P68133 377 aa13.2□□□□□ -0.3
CCNE1-203ENST00000444983 ZNF85Q03923 595 aa13.2□□□□□ -0.3
CCNE1-203ENST00000444983 PIGFQ07326 219 aa13.2□□□□□ -0.3
CCNE1-203ENST00000444983 SRSF1Q07955 248 aaKnown RBP eCLIP13.2□□□□□ -0.3
CCNE1-203ENST00000444983 ZNF684Q5T5D7 378 aa13.2□□□□□ -0.3
CCNE1-203ENST00000444983 CORO6Q6QEF8 472 aa13.2□□□□□ -0.3
CCNE1-203ENST00000444983 C22orf34Q6ZV56 151 aa13.2□□□□□ -0.3
CCNE1-203ENST00000444983 RHOUQ7L0Q8 258 aa13.2□□□□□ -0.3
CCNE1-203ENST00000444983 SSX6Q7RTT6 188 aa13.2□□□□□ -0.3
CCNE1-203ENST00000444983 SLC16A14Q7RTX9 510 aa13.2□□□□□ -0.3
CCNE1-203ENST00000444983 PRSS48Q7RTY5 328 aa13.2□□□□□ -0.3
CCNE1-203ENST00000444983 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.2□□□□□ -0.3
CCNE1-203ENST00000444983 LINC00346Q8IVM7 164 aa13.2□□□□□ -0.3
CCNE1-203ENST00000444983 ACBD7Q8N6N7 88 aa13.2□□□□□ -0.3
CCNE1-203ENST00000444983 OR10S1Q8NGN2 331 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms