RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 KLHL24Q6TFL4 600 aa13.96□□□□□ -0.17
SNX13-204ENST00000444712 WDFY1Q8IWB7 410 aa13.96□□□□□ -0.17
SNX13-204ENST00000444712 OR2AJ1Q8NGZ0 328 aa13.96□□□□□ -0.17
SNX13-204ENST00000444712 MCHR2Q969V1 340 aa13.96□□□□□ -0.17
SNX13-204ENST00000444712 INTS12Q96CB8 462 aaKnown RBP13.96□□□□□ -0.17
SNX13-204ENST00000444712 SMAD5Q99717 465 aaKnown RBP13.96□□□□□ -0.17
SNX13-204ENST00000444712 NEURL2Q9BR09 285 aa13.96□□□□□ -0.17
SNX13-204ENST00000444712 WACQ9BTA9 647 aa13.96□□□□□ -0.17
SNX13-204ENST00000444712 OR2B2Q9GZK3 357 aa13.96□□□□□ -0.17
SNX13-204ENST00000444712 NIPAL2Q9H841 368 aa13.96□□□□□ -0.17
SNX13-204ENST00000444712 LRFN1Q9P244 771 aa13.96□□□□□ -0.17
SNX13-204ENST00000444712 DHDHQ9UQ10 334 aa13.96□□□□□ -0.17
SNX13-204ENST00000444712 POLR1DQ9Y2S0 133 aa13.96□□□□□ -0.17
SNX13-204ENST00000444712 A0A0G2JMP0 313 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 A0A0X1KG70 313 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 A0A1B0GTH9 108 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 SLC43A1O75387 559 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 SRSF10O75494 262 aaKnown RBP13.95□□□□□ -0.18
SNX13-204ENST00000444712 SLC34A2O95436 690 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 ISG15P05161 165 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 UBCP0CG48 685 aaKnown RBP13.95□□□□□ -0.18
SNX13-204ENST00000444712 ACHEP22303 614 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 GUCA1AP43080 201 aaPredicted RBP13.95□□□□□ -0.18
SNX13-204ENST00000444712 B3GALT5-AS1P59052 145 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 RAC3P60763 192 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 TMEM244Q5VVB8 128 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 SPATC1Q76KD6 591 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 SYT9Q86SS6 491 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 LINC00346Q8IVM7 164 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 IL17RDQ8NFM7 739 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 OR4M2Q8NGB6 313 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 ENKURQ8TC29 256 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 LGALS14Q8TCE9 139 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 RFT1Q96AA3 541 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 ITPKCQ96DU7 683 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 ZC3HAV1LQ96H79 300 aaKnown RBP13.95□□□□□ -0.18
SNX13-204ENST00000444712 UTP23Q9BRU9 249 aaKnown RBP13.95□□□□□ -0.18
SNX13-204ENST00000444712 ZFP64Q9NPA5 681 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 CKLFQ9UBR5 152 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 FOXJ3Q9UPW0 622 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 CAMK2AQ9UQM7 478 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 ALPK2Q86TB3 2170 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 CFPP27918 469 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 RANBP1P43487 201 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 RFX2P48378 723 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 MMP16P51512 607 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 ESPNLQ6ZVH7 1005 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 CREB3L2Q70SY1 520 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 LRRTM1Q86UE6 522 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 ZNF227Q86WZ6 799 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 IL22RA1Q8N6P7 574 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 OR5H6Q8NGV6 325 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 CHAC2Q8WUX2 184 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 RAB40AQ8WXH6 277 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 SLAMF6Q96DU3 332 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 SFXN2Q96NB2 322 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 FAM173AQ9BQD7 235 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 MOB1AQ9H8S9 216 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 NPAP1Q9NZP6 1156 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 B4GALT7Q9UBV7 327 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 OR52A1Q9UKL2 312 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 HHLA2Q9UM44 414 aa13.95□□□□□ -0.18
SNX13-204ENST00000444712 LRRC3CA6NJW4 275 aa13.94□□□□□ -0.18
SNX13-204ENST00000444712 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.94□□□□□ -0.18
SNX13-204ENST00000444712 ZNF878C9JN71 531 aa13.94□□□□□ -0.18
SNX13-204ENST00000444712 PNPP00491 289 aa13.94□□□□□ -0.18
SNX13-204ENST00000444712 QDPRP09417 244 aa13.94□□□□□ -0.18
SNX13-204ENST00000444712 ITGA3P26006 1051 aa13.94□□□□□ -0.18
SNX13-204ENST00000444712 MAP2K3P46734 347 aa13.94□□□□□ -0.18
SNX13-204ENST00000444712 CSNK1A1P48729 337 aa13.94□□□□□ -0.18
SNX13-204ENST00000444712 ZNF133P52736 654 aaPredicted RBP13.94□□□□□ -0.18
SNX13-204ENST00000444712 MFGE8Q08431 387 aaPredicted RBP13.94□□□□□ -0.18
SNX13-204ENST00000444712 PDSS1Q5T2R2 415 aa13.94□□□□□ -0.18
SNX13-204ENST00000444712 HES5Q5TA89 166 aa13.94□□□□□ -0.18
SNX13-204ENST00000444712 OTPQ5XKR4 325 aa13.94□□□□□ -0.18
SNX13-204ENST00000444712 OR9K2Q8NGE7 335 aa13.94□□□□□ -0.18
SNX13-204ENST00000444712 C15orf40Q8WUR7 153 aa13.94□□□□□ -0.18
SNX13-204ENST00000444712 GFI1Q99684 422 aa13.94□□□□□ -0.18
SNX13-204ENST00000444712 HDHD2Q9H0R4 259 aa13.94□□□□□ -0.18
SNX13-204ENST00000444712 C11orf54Q9H0W9 315 aaPredicted RBP13.94□□□□□ -0.18
SNX13-204ENST00000444712 SEC61A2Q9H9S3 476 aa13.94□□□□□ -0.18
SNX13-204ENST00000444712 CENPMQ9NSP4 180 aa13.94□□□□□ -0.18
SNX13-204ENST00000444712 GLTPQ9NZD2 209 aa13.94□□□□□ -0.18
SNX13-204ENST00000444712 EMC9Q9Y3B6 208 aa13.94□□□□□ -0.18
SNX13-204ENST00000444712 PCDHGA9Q9Y5G4 932 aaKnown RBP13.94□□□□□ -0.18
SNX13-204ENST00000444712 NCKAP5O14513 1909 aa13.94□□□□□ -0.18
SNX13-204ENST00000444712 A0A0J9YW62 118 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 TMEM269A0A1B0GVZ9 245 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 PRR33A8MZF0 331 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 TNFSF11O14788 317 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 CTDSPLO15194 276 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 RAMP1O60894 148 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 FSTP19883 344 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 ENPP1P22413 925 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 GDF1P27539 372 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 C10orf128Q5T292 105 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 BCL2L15Q5TBC7 163 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 CARD17Q5XLA6 110 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 CLEC1AQ8NC01 280 aa13.93□□□□□ -0.18
SNX13-204ENST00000444712 OR6N1Q8NGY5 312 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms