RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 IMPAD1Q9NX62 359 aa12.26□□□□□ -0.45
SSBP3-208ENST00000444533 PLEK2Q9NYT0 353 aa12.26□□□□□ -0.45
SSBP3-208ENST00000444533 NDRG4Q9ULP0 352 aaKnown RBP12.26□□□□□ -0.45
SSBP3-208ENST00000444533 ZAR1LA6NP61 321 aa12.25□□□□□ -0.45
SSBP3-208ENST00000444533 FAM171A2A8MVW0 826 aa12.25□□□□□ -0.45
SSBP3-208ENST00000444533 ATP6V1G2-DDX39BF2Z307 99 aa12.25□□□□□ -0.45
SSBP3-208ENST00000444533 PRODHO43272 600 aa12.25□□□□□ -0.45
SSBP3-208ENST00000444533 SGCEO43556 437 aa12.25□□□□□ -0.45
SSBP3-208ENST00000444533 DOK2O60496 412 aa12.25□□□□□ -0.45
SSBP3-208ENST00000444533 RAF1P04049 648 aa12.25□□□□□ -0.45
SSBP3-208ENST00000444533 ZNF14P17017 642 aaPredicted RBP12.25□□□□□ -0.45
SSBP3-208ENST00000444533 SPI1P17947 270 aa12.25□□□□□ -0.45
SSBP3-208ENST00000444533 CCNOP22674 350 aa12.25□□□□□ -0.45
SSBP3-208ENST00000444533 STOMP27105 288 aa12.25□□□□□ -0.45
SSBP3-208ENST00000444533 PYCR1P32322 319 aa12.25□□□□□ -0.45
SSBP3-208ENST00000444533 FABP6P51161 128 aa12.25□□□□□ -0.45
SSBP3-208ENST00000444533 ELF3P78545 371 aaPredicted RBP12.25□□□□□ -0.45
SSBP3-208ENST00000444533 KCNMB1Q16558 191 aa12.25□□□□□ -0.45
SSBP3-208ENST00000444533 LCN1P1Q5VSP4 162 aa12.25□□□□□ -0.45
SSBP3-208ENST00000444533 PLBD1Q6P4A8 553 aa12.25□□□□□ -0.45
SSBP3-208ENST00000444533 CXXC5Q7LFL8 322 aaKnown RBP12.25□□□□□ -0.45
SSBP3-208ENST00000444533 ZNF611Q8N823 705 aa12.25□□□□□ -0.45
SSBP3-208ENST00000444533 PIGTQ969N2 578 aa12.25□□□□□ -0.45
SSBP3-208ENST00000444533 FBXO17Q96EF6 278 aa12.25□□□□□ -0.45
SSBP3-208ENST00000444533 CCL19Q99731 98 aa12.25□□□□□ -0.45
SSBP3-208ENST00000444533 OR2H1Q9GZK4 316 aa12.25□□□□□ -0.45
SSBP3-208ENST00000444533 PLEKHF2Q9H8W4 249 aa12.25□□□□□ -0.45
SSBP3-208ENST00000444533 ZNF224Q9NZL3 707 aa12.25□□□□□ -0.45
SSBP3-208ENST00000444533 ASH2LQ9UBL3 628 aa12.25□□□□□ -0.45
SSBP3-208ENST00000444533 TMEFF2Q9UIK5 374 aaPredicted RBP12.25□□□□□ -0.45
SSBP3-208ENST00000444533 CRYBG3Q68DQ2 2970 aa12.24□□□□□ -0.45
SSBP3-208ENST00000444533 IGHV2OR16-5A0A0B4J2B6 119 aa12.24□□□□□ -0.45
SSBP3-208ENST00000444533 ZNF503-AS2A6NEH8 195 aa12.24□□□□□ -0.45
SSBP3-208ENST00000444533 FAM183AA6NL82 134 aa12.24□□□□□ -0.45
SSBP3-208ENST00000444533 SHISA9B4DS77 424 aa12.24□□□□□ -0.45
SSBP3-208ENST00000444533 DCTN6O00399 190 aa12.24□□□□□ -0.45
SSBP3-208ENST00000444533 MPZL1O95297 269 aa12.24□□□□□ -0.45
SSBP3-208ENST00000444533 PLAUP00749 431 aa12.24□□□□□ -0.45
SSBP3-208ENST00000444533 GYPBP06028 91 aa12.24□□□□□ -0.45
SSBP3-208ENST00000444533 CELA3BP08861 270 aa12.24□□□□□ -0.45
SSBP3-208ENST00000444533 MMP7P09237 267 aaPredicted RBP12.24□□□□□ -0.45
SSBP3-208ENST00000444533 LOXP28300 417 aaPredicted RBP12.24□□□□□ -0.45
SSBP3-208ENST00000444533 RAD52P43351 418 aa12.24□□□□□ -0.45
SSBP3-208ENST00000444533 HTR5AP47898 357 aa12.24□□□□□ -0.45
SSBP3-208ENST00000444533 SELENOVP59797 346 aa12.24□□□□□ -0.45
SSBP3-208ENST00000444533 PSG4Q00888 419 aa12.24□□□□□ -0.45
SSBP3-208ENST00000444533 ENDOGQ14249 297 aaKnown RBP12.24□□□□□ -0.45
SSBP3-208ENST00000444533 SLC35D3Q5M8T2 416 aa12.24□□□□□ -0.45
SSBP3-208ENST00000444533 ZNF362Q5T0B9 420 aaPredicted RBP12.24□□□□□ -0.45
SSBP3-208ENST00000444533 AGAP6Q5VW22 663 aa12.24□□□□□ -0.45
SSBP3-208ENST00000444533 SLX4IPQ5VYV7 408 aa12.24□□□□□ -0.45
SSBP3-208ENST00000444533 ZNF544Q6NX49 715 aa12.24□□□□□ -0.45
SSBP3-208ENST00000444533 CDH24Q86UP0 819 aa12.24□□□□□ -0.45
SSBP3-208ENST00000444533 CPOQ8IVL8 374 aa12.24□□□□□ -0.45
SSBP3-208ENST00000444533 ZNF555Q8NEP9 628 aa12.24□□□□□ -0.45
SSBP3-208ENST00000444533 SLC26A10Q8NG04 563 aa12.24□□□□□ -0.45
SSBP3-208ENST00000444533 OR51L1Q8NGJ5 315 aa12.24□□□□□ -0.45
SSBP3-208ENST00000444533 SMAP2Q8WU79 429 aaPredicted RBP12.24□□□□□ -0.45
SSBP3-208ENST00000444533 TMEM171Q8WVE6 324 aa12.24□□□□□ -0.45
SSBP3-208ENST00000444533 NINJ1Q92982 152 aa12.24□□□□□ -0.45
SSBP3-208ENST00000444533 MS4A3Q96HJ5 214 aa12.24□□□□□ -0.45
SSBP3-208ENST00000444533 RDH12Q96NR8 316 aa12.24□□□□□ -0.45
SSBP3-208ENST00000444533 DHRS9Q9BPW9 319 aa12.24□□□□□ -0.45
SSBP3-208ENST00000444533 GRIP2Q9C0E4 1043 aa12.24□□□□□ -0.45
SSBP3-208ENST00000444533 CXorf56Q9H5V9 222 aa12.24□□□□□ -0.45
SSBP3-208ENST00000444533 FBXO9Q9UK97 447 aaPredicted RBP12.24□□□□□ -0.45
SSBP3-208ENST00000444533 UNC79Q9P2D8 2635 aa12.23□□□□□ -0.45
SSBP3-208ENST00000444533 C5orf49A4QMS7 147 aa12.23□□□□□ -0.45
SSBP3-208ENST00000444533 TLX2O43763 284 aaPredicted RBP12.23□□□□□ -0.45
SSBP3-208ENST00000444533 GLCEO94923 617 aa12.23□□□□□ -0.45
SSBP3-208ENST00000444533 SPARCP09486 303 aa12.23□□□□□ -0.45
SSBP3-208ENST00000444533 GAAP10253 952 aa12.23□□□□□ -0.45
SSBP3-208ENST00000444533 COX5BP10606 129 aa12.23□□□□□ -0.45
SSBP3-208ENST00000444533 APEX1P27695 318 aaKnown RBP12.23□□□□□ -0.45
SSBP3-208ENST00000444533 GSTT1P30711 240 aa12.23□□□□□ -0.45
SSBP3-208ENST00000444533 APOBEC3AP31941 199 aaPredicted RBP12.23□□□□□ -0.45
SSBP3-208ENST00000444533 ENTPD1P49961 510 aa12.23□□□□□ -0.45
SSBP3-208ENST00000444533 SPOCK1Q08629 439 aa12.23□□□□□ -0.45
SSBP3-208ENST00000444533 ECH1Q13011 328 aa12.23□□□□□ -0.45
SSBP3-208ENST00000444533 MEP1BQ16820 701 aa12.23□□□□□ -0.45
SSBP3-208ENST00000444533 LRRC36Q1X8D7 754 aa12.23□□□□□ -0.45
SSBP3-208ENST00000444533 KRT80Q6KB66 452 aa12.23□□□□□ -0.45
SSBP3-208ENST00000444533 VHLLQ6RSH7 139 aa12.23□□□□□ -0.45
SSBP3-208ENST00000444533 UGT2A3Q6UWM9 527 aa12.23□□□□□ -0.45
SSBP3-208ENST00000444533 PAMR1Q6UXH9 720 aa12.23□□□□□ -0.45
SSBP3-208ENST00000444533 SHFQ7M4L6 423 aa12.23□□□□□ -0.45
SSBP3-208ENST00000444533 GID4Q8IVV7 300 aa12.23□□□□□ -0.45
SSBP3-208ENST00000444533 C1orf174Q8IYL3 243 aa12.23□□□□□ -0.45
SSBP3-208ENST00000444533 PACRGLQ8N7B6 248 aa12.23□□□□□ -0.45
SSBP3-208ENST00000444533 NUP37Q8NFH4 326 aa12.23□□□□□ -0.45
SSBP3-208ENST00000444533 AKR7LQ8NHP1 331 aa12.23□□□□□ -0.45
SSBP3-208ENST00000444533 FGFBP3Q8TAT2 258 aa12.23□□□□□ -0.45
SSBP3-208ENST00000444533 IPCEF1Q8WWN9 437 aaPredicted RBP12.23□□□□□ -0.45
SSBP3-208ENST00000444533 INTS14Q96SY0 518 aa12.23□□□□□ -0.45
SSBP3-208ENST00000444533 DDOQ99489 341 aa12.23□□□□□ -0.45
SSBP3-208ENST00000444533 PITX2Q99697 317 aa12.23□□□□□ -0.45
SSBP3-208ENST00000444533 NMNAT2Q9BZQ4 307 aa12.23□□□□□ -0.45
SSBP3-208ENST00000444533 BCL2L14Q9BZR8 327 aa12.23□□□□□ -0.45
SSBP3-208ENST00000444533 HDHD2Q9H0R4 259 aa12.23□□□□□ -0.45
SSBP3-208ENST00000444533 VCX3BQ9H321 246 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms