RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 RPRD1BQ9NQG5 326 aaKnown RBP13.01□□□□□ -0.33
CSNK1E-210ENST00000442216 G3V2T6 193 aa13□□□□□ -0.33
CSNK1E-210ENST00000442216 H3BN98 237 aa13□□□□□ -0.33
CSNK1E-210ENST00000442216 DCTN6O00399 190 aa13□□□□□ -0.33
CSNK1E-210ENST00000442216 IFNGP01579 166 aa13□□□□□ -0.33
CSNK1E-210ENST00000442216 SCG5P05408 212 aa13□□□□□ -0.33
CSNK1E-210ENST00000442216 IGFBP1P08833 259 aaPredicted RBP13□□□□□ -0.33
CSNK1E-210ENST00000442216 COX5BP10606 129 aa13□□□□□ -0.33
CSNK1E-210ENST00000442216 PRKACGP22612 351 aa13□□□□□ -0.33
CSNK1E-210ENST00000442216 PCSK6P29122 969 aa13□□□□□ -0.33
CSNK1E-210ENST00000442216 GRK5P34947 590 aa13□□□□□ -0.33
CSNK1E-210ENST00000442216 APLNRP35414 380 aa13□□□□□ -0.33
CSNK1E-210ENST00000442216 GLRXP35754 106 aa13□□□□□ -0.33
CSNK1E-210ENST00000442216 PTH2RP49190 550 aa13□□□□□ -0.33
CSNK1E-210ENST00000442216 RPS23P62266 143 aaKnown RBP13□□□□□ -0.33
CSNK1E-210ENST00000442216 AQP6Q13520 282 aa13□□□□□ -0.33
CSNK1E-210ENST00000442216 EFNB3Q15768 340 aa13□□□□□ -0.33
CSNK1E-210ENST00000442216 SLC27A4Q6P1M0 643 aa13□□□□□ -0.33
CSNK1E-210ENST00000442216 PARP8Q8N3A8 854 aa13□□□□□ -0.33
CSNK1E-210ENST00000442216 OR2T4Q8NH00 348 aa13□□□□□ -0.33
CSNK1E-210ENST00000442216 OR4Q3Q8NH05 313 aa13□□□□□ -0.33
CSNK1E-210ENST00000442216 CENPNQ96H22 339 aaPredicted RBP13□□□□□ -0.33
CSNK1E-210ENST00000442216 TSSK2Q96PF2 358 aa13□□□□□ -0.33
CSNK1E-210ENST00000442216 OR2H1Q9GZK4 316 aa13□□□□□ -0.33
CSNK1E-210ENST00000442216 RERGLQ9H628 205 aa13□□□□□ -0.33
CSNK1E-210ENST00000442216 CDH20Q9HBT6 801 aa13□□□□□ -0.33
CSNK1E-210ENST00000442216 SRA1Q9HD15 236 aaKnown RBP13□□□□□ -0.33
CSNK1E-210ENST00000442216 CMC2Q9NRP2 79 aa13□□□□□ -0.33
CSNK1E-210ENST00000442216 USF3Q68DE3 2245 aa13□□□□□ -0.33
CSNK1E-210ENST00000442216 B9A039 149 aa12.99□□□□□ -0.33
CSNK1E-210ENST00000442216 GAAP10253 952 aa12.99□□□□□ -0.33
CSNK1E-210ENST00000442216 STOMP27105 288 aa12.99□□□□□ -0.33
CSNK1E-210ENST00000442216 SERPINF1P36955 418 aa12.99□□□□□ -0.33
CSNK1E-210ENST00000442216 SLC25A1P53007 311 aa12.99□□□□□ -0.33
CSNK1E-210ENST00000442216 CDK5Q00535 292 aa12.99□□□□□ -0.33
CSNK1E-210ENST00000442216 SNTB2Q13425 540 aaKnown RBP12.99□□□□□ -0.33
CSNK1E-210ENST00000442216 KPNB1Q14974 876 aaKnown RBP12.99□□□□□ -0.33
CSNK1E-210ENST00000442216 ADIPOQQ15848 244 aa12.99□□□□□ -0.33
CSNK1E-210ENST00000442216 SWI5Q1ZZU3 235 aa12.99□□□□□ -0.33
CSNK1E-210ENST00000442216 ZDHHC13Q8IUH4 622 aa12.99□□□□□ -0.33
CSNK1E-210ENST00000442216 C1orf174Q8IYL3 243 aa12.99□□□□□ -0.33
CSNK1E-210ENST00000442216 SLC37A3Q8NCC5 494 aa12.99□□□□□ -0.33
CSNK1E-210ENST00000442216 CPEB3Q8NE35 698 aaKnown RBP12.99□□□□□ -0.33
CSNK1E-210ENST00000442216 LRTOMTQ8WZ04 291 aa12.99□□□□□ -0.33
CSNK1E-210ENST00000442216 C11orf40Q8WZ69 217 aa12.99□□□□□ -0.33
CSNK1E-210ENST00000442216 RBM4Q9BWF3 364 aaKnown RBP12.99□□□□□ -0.33
CSNK1E-210ENST00000442216 OSBPL10Q9BXB5 764 aa12.99□□□□□ -0.33
CSNK1E-210ENST00000442216 GABARAPL1Q9H0R8 117 aa12.99□□□□□ -0.33
CSNK1E-210ENST00000442216 WNT5BQ9H1J7 359 aa12.99□□□□□ -0.33
CSNK1E-210ENST00000442216 EMC7Q9NPA0 242 aa12.99□□□□□ -0.33
CSNK1E-210ENST00000442216 PAPOLBQ9NRJ5 636 aaKnown RBP12.99□□□□□ -0.33
CSNK1E-210ENST00000442216 KIF17Q9P2E2 1029 aa12.99□□□□□ -0.33
CSNK1E-210ENST00000442216 ATPIF1Q9UII2 106 aa12.99□□□□□ -0.33
CSNK1E-210ENST00000442216 NDRG4Q9ULP0 352 aaKnown RBP12.99□□□□□ -0.33
CSNK1E-210ENST00000442216 PMF1-BGLAPU3KQ54 211 aa12.99□□□□□ -0.33
CSNK1E-210ENST00000442216 CHD3Q12873 2000 aaKnown RBP12.99□□□□□ -0.33
CSNK1E-210ENST00000442216 RIIAD1A6NNX1 92 aa12.98□□□□□ -0.33
CSNK1E-210ENST00000442216 H7C417 338 aa12.98□□□□□ -0.33
CSNK1E-210ENST00000442216 ICMTO60725 284 aa12.98□□□□□ -0.33
CSNK1E-210ENST00000442216 HMGN1P05114 100 aa12.98□□□□□ -0.33
CSNK1E-210ENST00000442216 OR4A8P0C604 315 aa12.98□□□□□ -0.33
CSNK1E-210ENST00000442216 ZNF23P17027 643 aa12.98□□□□□ -0.33
CSNK1E-210ENST00000442216 ZNF3P17036 446 aa12.98□□□□□ -0.33
CSNK1E-210ENST00000442216 APEX1P27695 318 aaKnown RBP12.98□□□□□ -0.33
CSNK1E-210ENST00000442216 THBS4P35443 961 aa12.98□□□□□ -0.33
CSNK1E-210ENST00000442216 RAD52P43351 418 aa12.98□□□□□ -0.33
CSNK1E-210ENST00000442216 CENPAP49450 140 aa12.98□□□□□ -0.33
CSNK1E-210ENST00000442216 EVX1P49640 407 aa12.98□□□□□ -0.33
CSNK1E-210ENST00000442216 DAPP51397 102 aa12.98□□□□□ -0.33
CSNK1E-210ENST00000442216 MST1LQ2TV78 715 aa12.98□□□□□ -0.33
CSNK1E-210ENST00000442216 KRT80Q6KB66 452 aa12.98□□□□□ -0.33
CSNK1E-210ENST00000442216 UGT2A3Q6UWM9 527 aa12.98□□□□□ -0.33
CSNK1E-210ENST00000442216 UNQ6126/PRO20091Q6UXV3 157 aa12.98□□□□□ -0.33
CSNK1E-210ENST00000442216 AMIGO2Q86SJ2 522 aa12.98□□□□□ -0.33
CSNK1E-210ENST00000442216 SLC26A10Q8NG04 563 aa12.98□□□□□ -0.33
CSNK1E-210ENST00000442216 PYDC1Q8WXC3 89 aa12.98□□□□□ -0.33
CSNK1E-210ENST00000442216 POM121L2Q96KW2 1035 aa12.98□□□□□ -0.33
CSNK1E-210ENST00000442216 TEX12Q9BXU0 123 aa12.98□□□□□ -0.33
CSNK1E-210ENST00000442216 NMNAT2Q9BZQ4 307 aa12.98□□□□□ -0.33
CSNK1E-210ENST00000442216 BCL2L14Q9BZR8 327 aa12.98□□□□□ -0.33
CSNK1E-210ENST00000442216 SLC25A19Q9HC21 320 aa12.98□□□□□ -0.33
CSNK1E-210ENST00000442216 ENOPH1Q9UHY7 261 aa12.98□□□□□ -0.33
CSNK1E-210ENST00000442216 KCNG2Q9UJ96 466 aa12.98□□□□□ -0.33
CSNK1E-210ENST00000442216 CMAHPQ9Y471 501 aa12.98□□□□□ -0.33
CSNK1E-210ENST00000442216 SGCEO43556 437 aa12.97□□□□□ -0.33
CSNK1E-210ENST00000442216 MPZL1O95297 269 aa12.97□□□□□ -0.33
CSNK1E-210ENST00000442216 GDI2P50395 445 aaKnown RBP12.97□□□□□ -0.33
CSNK1E-210ENST00000442216 BLVRAP53004 296 aa12.97□□□□□ -0.33
CSNK1E-210ENST00000442216 CRISP1P54107 249 aa12.97□□□□□ -0.33
CSNK1E-210ENST00000442216 ATP5J2P56134 94 aa12.97□□□□□ -0.33
CSNK1E-210ENST00000442216 SNRPD2P62316 118 aaKnown RBP12.97□□□□□ -0.33
CSNK1E-210ENST00000442216 ESRRGP62508 458 aa12.97□□□□□ -0.33
CSNK1E-210ENST00000442216 ADAM8P78325 824 aa12.97□□□□□ -0.33
CSNK1E-210ENST00000442216 TEKQ02763 1124 aa12.97□□□□□ -0.33
CSNK1E-210ENST00000442216 CRMP1Q14194 572 aa12.97□□□□□ -0.33
CSNK1E-210ENST00000442216 GINS1Q14691 196 aa12.97□□□□□ -0.33
CSNK1E-210ENST00000442216 KDM4DQ6B0I6 523 aa12.97□□□□□ -0.33
CSNK1E-210ENST00000442216 VHLLQ6RSH7 139 aa12.97□□□□□ -0.33
CSNK1E-210ENST00000442216 CYB561A3Q8NBI2 242 aa12.97□□□□□ -0.33
CSNK1E-210ENST00000442216 GJC3Q8NFK1 279 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms